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[+] Show/hide bicluster #56 rows and columns.
bicluster 56
Mycobacterium tuberculosis H37Rv
22x36
[+] Show/hide bicluster #56 rows (genes).
bicluster 56 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #56 rows (short gene names).
bicluster 56 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #56 rows (long gene names).
bicluster 56 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #56 rows (NCBI RefSeq gene IDs).
bicluster 56 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #56 gene upstream sequences.
bicluster 56 upstream sequences
Mycobacterium tuberculosis H37Rv
21
upstream
[+] Show/hide bicluster #56 columns (arrays; conditions).
bicluster 56 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #56 ratios.
bicluster 56 ratios
Mycobacterium tuberculosis H37Rv
22x36
GENES Amp Antimycin ARP4 Ascididemin_Natural_product Cap CCCP Cephalexin Cerulenin Clofazimine CPZ DCCD DNP DTNB Econazole Eta GSNO_CFZ GSNO_CPZ GSNO_menadione INH menadione mercaptoethanol methoxatin Min_med__succinate_ Nam NaN3 Nigericin pH4_8 PZA Rox SM starvation TRC X_109 X_111895 X_241 ZnSO4
ORF04157 1.25619006386063 0.100613695649679 -1.70993399052225 -0.174282099483797 -1.03669548852857 -0.714362246761685 -0.142968573506198 0.908657523630738 0.0786903337071245 -0.554427136116955 -1.42834183903537 -0.78899442119428 0.121258597952491 0.482138189762542 0.932014248473043 -0.555508637213028 -0.931416610643987 -0.546918698641591 1.70751146040367 -0.325270520605808 -0.159182049386583 -0.126784699774531 -0.114901306801616 -0.337669623120939 -0.0350707492163097 1.14810892580201 0.201630380974804 -0.156518059210287 0.528272048503344 0.710385977120242 -1.71945621013589 -0.705260725764498 0.505536777724131 -0.382665174105334 -0.150012200701774 0.126848461901685
Rv0429c 0.443210782681686 0.540253215503834 -1.99812325027172 -0.0173885314908021 0.953030606035504 -3.48734288778597 0.603311859654315 1.31342329150343 -1.26542744894906 -0.74957868827572 -1.19725410803899 -2.26170392033743 1.06957481249330 -0.339017157738610 0.657821316374731 -1.32137939440155 -1.09442702686823 -0.0831941313959614 0.925819697900369 -0.532538772262895 0.793773231405183 1.23323554037009 -0.304761891588846 -0.6064350467062 -0.449612921072805 1.43621587105616 -0.736002628287487 -0.302091863028021 1.00487379385759 0.317983802728834 -1.21706189325643 -1.08348814739430 0.283372847561027 -0.610657686696437 -0.516263986218891 0.915310981280366
Rv0545c 1.01652187666388 -0.458376396204812 -1.44979485585941 -1.00174925265988 -0.493464348320216 -3.17027806226947 0.445778638629288 0.0445802193057554 -0.958525010209805 -1.64085988204637 -1.86965313504249 -2.76935663340623 -0.187144403307564 0.129886243950455 0.964883210562096 -1.79696432045215 -2.69900208103338 -1.21336938660754 1.74487692449317 -0.68281789746492 0.282853806205150 0.162395261815699 1.95886750440864 -0.108037025894544 -0.317979891724058 0.419874128138981 0.321994071523803 0.350297112301580 0.547858014058688 0.625668407672181 -0.117198832536875 -1.24207275826688 0.483616914486278 -1.42109546909480 -0.524643367923316 -0.355398712729032
Rv0546c 0.368152553955733 0.804843461301944 -1.58442327409669 -0.533745266552039 0.572788831087547 -2.47068307772932 0.636987216775814 1.04641610263000 -0.588775658930851 -1.34576200525752 -1.63537665128067 -3.18349115615129 0.924896218258052 0.355954019802807 0.473140258342961 0.0472751627880521 -2.08881563426551 -0.292843973486329 0.76724413574435 -0.458925112133611 0.0766831984169337 0.271792544819613 -0.0443662064093093 0.0783097525311127 0.321596403358584 0.215642058652768 -1.27209303589306 -0.0544342153736269 0.162383876965328 0.34266774725806 -1.57199744883194 -1.06171987468232 0.224498683387054 -1.07166044419856 -0.603802025699912 0.66646154061716
Rv0567 0.616481693933029 0.516085149223407 -2.52488516272745 -0.362325958199036 0.479956863565076 -2.08852485807709 0.191914759368342 0.528010766721716 -1.02486864787276 -1.52807190937205 -2.91062258089126 -2.88126703405698 0.322059550243463 -0.752419997829704 0 0.0823961535809369 -1.52508385803371 -0.915676757007011 0.572170895210681 -0.819182655052083 -0.27918679045854 0.625989967470512 -0.733841832819056 -0.317753640716627 -0.483673345815274 -0.0161046956815012 0.342194211885845 -0.347775749579057 0.627156021246383 0.182717331485507 -1.81473793461910 -1.73655377946716 0.175099622521459 -0.331168665305522 -0.371772905515987 0.850558791726137
Rv0636 0.540236037691239 0.321227233159634 -1.44767033451609 -0.635777644767786 0.560015578215695 -3.03977969457356 0.0301263212312252 0.285293810634314 -1.27245270935971 -0.866344165204172 -3.87534449118804 -3.07991217038583 0.0698005529438523 -0.354564638887258 0.377487845700264 -0.889540623876465 -1.36856736406247 -0.606919201310117 0.526242559313453 -0.225482422325077 -0.181116239930865 -0.0378518078438132 -0.954977053230063 0.157751230795547 -0.314442581583453 0.112432796287904 -0.158178017239299 0 0.80066207370451 0.71419994409512 -1.26231150634566 -1.05441948433792 0.0787129651676651 -0.835204927446488 -0.426075226753868 0.0213665438914953
Rv0637 0.72578532986955 0.444973947401381 -1.60516179235022 0.00265886194251642 -0.823473579938072 -1.79437527949283 0.117816850669694 0.639696687036135 -0.326758866427784 -1.57519862991381 -0.78131666130012 -1.87364264036227 0.586890398420808 0.231330881425100 0.215824987763351 -0.88437305727611 -2.70820284861517 -0.99138220876175 0.95978040554838 -1.29762310123701 0.557431791289017 0.911441994113128 -1.18221340802114 -0.128772609983883 -0.363850036504949 0.534800792335918 -0.683351194033479 -0.286217124129991 0 0.90946191661863 -2.92328556429694 -1.59737803514046 0.567078199254142 -0.428566584517888 -0.426637286800699 0.734912578824907
Rv0683 0.50620793834687 0.103672669054214 -1.82427202363703 -0.134999340985423 0.786193685955298 -2.68834697069476 0.472077919627387 0.373135495586332 -0.89351024317172 -1.03089672646600 -2.3304278777823 -3.32392081353843 0.148696582403470 -0.370266906908086 0.586635694571778 -0.579397729578751 -1.56346749798658 -0.505930769509319 0.995176728153534 -0.159042604385495 0.0131946043182530 -0.135170214142686 0.301753349112321 -0.135576019114295 -1.51566078612097 1.02939953243716 -0.496571396208402 -0.0854141919573714 0.873492375033227 1.50681141392688 -1.16268099952710 -1.91781381457121 0.345655449066512 -0.411430014539309 -0.451266235103533 0.429613622112953
Rv0703 0.498055138088819 0.329638271718821 -1.42835872244392 -0.560864738361117 0.848604895265376 -3.00163526645744 0.36884974973079 0.219240470792659 -1.48832338729549 -1.13091931693869 -2.49169802163082 -2.59090085217768 0.151854567076096 -0.560396547214724 -0.145270234222954 -1.31165015730586 -2.14759603067211 -0.716473887092896 0.236971866053852 -0.601780292569351 -0.0411657461330805 0.385971936754766 -0.548275471439933 -0.125413919520958 -1.69649319516665 0.0907444796706645 -0.118225465279765 0.0803234757571537 1.63866637865168 0.773980178360855 -1.84428275271415 -1.05859107701061 0.235283321302382 -0.435387262250277 -0.45573432459826 0.112214863868357
Rv0704 0.85658110864536 0.359099753372 -1.10661879137702 -0.0859866629712338 0.157811676384564 -3.39454047243965 0.670648374850071 0.374270633128281 -1.08771303023972 -1.04096277847652 -2.88438298781968 -3.1328876660456 0.365011013437981 -0.525198156003535 -0.0389783962405235 -0.96349223655156 -1.6597955841391 -0.708664247192889 0.555652676822667 -0.548353375831354 0 0.261169199905386 -0.890719441111172 0.0421472449150749 -1.26270263916571 0.160625352005936 -0.430485004691654 0.286393204101694 0.316476355148636 0.672819535419631 -1.85522122906140 -1.18988572036399 0.270829740905773 -0.294387479153759 -0.373622665451515 0.595211918771166
Rv0718 0.822390554156722 0.358971205204003 -1.31320187493096 -0.200438720449532 0.99818766728711 -2.70328776638320 0.725612460915616 0.523464289207777 -0.96327804133807 -1.0292522015049 -2.91832005546829 -2.87609358736137 0.281638026406815 -0.349376116335861 0.282214755515011 -0.683312090828214 -1.72247186527655 -0.325374785231052 0.753230677365966 -0.268422570595543 0.293585346208165 0.243962588627760 -0.849135226257585 -0.305689672353785 -1.33473048879803 0.526722040359999 -0.56512548403328 -0.138545658274831 1.30212510475688 1.54442252585456 -1.86031190295896 -1.48476057449329 0.197391514388280 -0.341092748693214 -0.262664384302492 0.543379180946642
Rv0719 0.751126431686297 0.518202298404216 -1.08124640134594 -0.146089607444526 0.840077852452266 -2.48347051237546 0.747800120969798 0.549793397017215 -1.00604179766322 -1.16735875733607 -2.48290190974908 -2.57481716312405 0.65422095470314 -0.427598934430663 0.181454995592115 -0.877751619866416 -2.14129747747099 -0.494995004833646 0.502464604757097 -0.234853535953289 0.267941807025688 0.685257872246132 -0.707474683749172 -0.312569929199936 -1.27841741507230 0.658880845637642 -0.785074188384839 -0.234149893427851 1.34356361227559 1.59760803889579 -1.94475248478166 -0.85246201446294 0.510709272879832 -0.193200306594778 -0.0676656670412446 0.508652243861856
Rv0720 0.785916080268501 0.421683626395811 -1.66731833754327 -0.0234936786720161 0.574335472922585 -2.9386743907322 0.807917107808492 0.766139258218902 -1.13243965107374 -1.21334423093897 -2.69722321443972 -2.71579727898681 0.516843097478975 -0.67559907497391 0.197173783541131 -0.457462591607618 -1.96672920520269 -0.389765636604956 0.855390732289928 0.0252514570112082 0.22922889652176 0.365237088097181 -1.30293843081930 -0.327130652025812 -1.32940052855665 0.710850690482385 -0.572465212832389 0.122335711114461 0.843013232169828 1.33070941447814 -2.24068991394519 -1.35779340968323 0.262783298651265 -0.340597218565546 -0.102252567037994 0.64366624801185
Rv0732 0.997225880952145 0.613812043195726 -1.06283122334733 -0.149000966487143 -0.207163170559008 -2.58617342201645 0.518601925509349 1.05120930475882 -0.683859021116074 -1.08584621665959 -3.11021224826816 -2.79438821286992 0.730356681972905 0.265217487342437 0.934065656953856 -0.545290955581015 -1.82588453856079 -0.193956803466126 1.21891969725651 -0.0852859045747105 0.359850227574445 0.529763269441455 -0.00812162161823544 0.0141313497917501 -0.465586859629065 -0.092144533036029 -0.186636862200824 -0.119646682483907 0.461907984153756 0.518081156728967 -0.583580415315925 -1.79797070428047 0.131761867062563 -0.295023845983588 -0.367781322206676 1.18124371741197
Rv1241 0.295848939081943 0.930721359429773 -1.57329466817444 0.0743087978738207 1.12095900543353 -3.04905554817261 0.160089199871676 1.15068377549145 -0.816187725113364 -1.26732866926439 -1.53514502677305 -2.88799791506250 0.546106841325138 0.220623698086050 0.679083109434048 -0.38337848688229 -1.18329299012708 -0.79213902685271 1.06982963334075 -0.858606839477169 0.453699397248182 0.764174553253768 -0.877402262313565 -0.501125531802045 -0.143017760274566 0.972692874735112 -0.917594303230364 -0.396476670667644 1.65431451181292 1.22779346521534 -0.637988222998194 -1.19730147800887 0.235540835070928 -0.160637391424809 -0.65820526956537 1.06628466870205
Rv2067c 0.669105834421742 0.491324686653962 -2.16256872668474 0.179762856708861 0.292437703693955 -3.0960816130284 0.149915298879812 0.679879035919373 -1.10557237511252 -0.935052078789379 -2.78626824897858 -2.64583527223508 -0.202826647893334 -0.549783477261768 0.878643125357502 -0.631620483624184 -1.00124943062994 -0.406559346978148 0.597055660027904 -0.459875325280262 -0.142152038709041 0.521586676215796 -0.412907071595244 -0.252242223215753 -0.487539810050227 0.947085665675906 1.25410255981718 -0.222656705522666 0.920777662461466 1.63438869647295 -0.88039233874303 -0.552549026708763 -0.220892815693559 0.155623915932044 -0.582060360248287 0.48637346324479
Rv2952 0.682907587753052 0.488422026221139 -1.23665678765100 -0.507003498200603 0.95292175720665 -2.77744965622215 0.585721726573295 1.08914824740429 -1.14688520557839 -1.13631285372513 -3.11294196230704 -2.68177147827968 0.588982458175432 -0.419994817520367 0.835357655732868 -1.12557855782114 -1.81432318441845 -0.315468666124379 0.894300518303547 -0.448614816970589 0.775373778353565 0.491172374660107 -0.520979195097233 -0.307910315409908 -0.94075099873542 1.29567564487325 -0.925441302036579 -0.138758403687988 1.49038433815055 0.471130218702202 -1.01203938588507 -1.09137879301061 0.320132595749527 -0.476574776185809 -0.0386764744630769 0.941308462514335
Rv2953 0.323351229113210 0.456293825505836 -1.78870690094706 0.00637283023963162 -0.0761657667427284 -2.90051003342309 0.410452878165849 0.798665151822855 -1.30856943791337 -0.827604916845255 -1.78142066910962 -2.11684001708785 0.268765551430055 -0.344952004188905 0.83306660129452 -0.199368629267632 -1.14990020374885 -0.70935230816504 0.949891524136087 -0.604553358964292 0.289568671401103 0.438621676301142 -1.31457479814603 -0.163506560990665 -0.650721128505923 0.426690021829614 0.0720997598073743 -0.281291191542864 -0.616043198574699 0.425066638717344 0.294986745091509 -1.3269625720991 0.292342880698178 -0.306208985131916 0.198402624426694 0.526953415669942
Rv2996c 0.656626321775562 0.584239585646257 -2.25822763061241 -0.511492518770115 0.96552379122544 -1.44295404215348 0.582750622430399 0.87108784230271 -1.89183181774197 -1.13270615310353 -1.96339163085091 -1.96588140122150 1.09472706057490 -0.52366431458772 0.0670582908570237 -0.864273770610327 -1.54250206296158 -0.220854907584415 -0.0829596944420448 0 1.27758668479216 0.834560223531689 -1.45100261788881 -0.405084437041109 0.250886608119564 1.00588574467648 0.229343287638559 -0.297062502826265 0.912465866259364 0.278568936875184 -0.803869663615694 -1.62786868021099 -0.215466188814117 -0.680429840839203 -0.945969107426113 0.37959122627936
Rv3524 0.292997189149024 0.0249864016887336 -1.41152538825866 -0.0466314974711451 1.35070299210803 -2.89221457626731 0.414694794278665 1.09627500955405 -1.42467388627009 -1.15079409408044 -2.31868288968324 -3.58815482017017 0.197650197110232 -0.647336768423296 0.802121270234592 -1.54684002169894 -1.82708220703334 -0.504541860821165 1.38705822992091 -0.374406625643872 0.282716336024272 0.115040421513215 -0.818156412883087 -0.0908524207610784 0.00669151862951313 1.23656787521791 -0.603533365851641 -0.278074371152023 1.53660092447573 0.788581800165532 -1.28737611832202 -1.15128621212550 0.23087116764665 -1.12054371219456 -0.213616660978923 0.942357126799465
Rv3722c -0.209123173005760 0.624854954376809 -0.78702101861838 -0.0119887078114890 1.42427023530965 -2.99303999442053 -0.00125224701111784 0.773409909670659 -1.30493965133001 -0.827953692861236 -1.92473442708249 -3.11233785163778 0.212587459574265 0 0.0508582640989347 -0.909861647057429 -1.23669663975612 0.214511558071533 -0.0430370940633994 0.224337002105768 0.252187475684578 0.998703754799887 -1.09311640383735 -0.55918326622421 -0.476523957717202 0.230318334039225 -0.350743558450663 -0.610897089712154 1.22910772144607 0.535320083568646 -0.856413227029402 -0.998588779568455 -0.297541107382513 0.185918693508259 -1.29669409184204 0.681924874445732
Rv3737 0.681965329272182 0.417523759284767 -0.428429091455875 0.158430559448491 -0.370211357877623 -3.19713396163201 0.575610965550676 1.33100234873729 -0.612621112559459 -0.42939240887695 -0.588833039648362 -2.71963777061772 0.91297248252374 -0.277568297863201 0.943019730328767 -1.99246101925049 -1.28966321618059 -0.5694804925075 1.07491045694470 -0.956680519837063 0.725515504998199 1.50722984483366 -0.96695940414427 -0.134115644812209 -0.830610934108218 0.865215734978578 -0.97298716814636 -0.154855206462884 -0.237609156555708 0.318214435932763 -1.46599835463556 -0.73259112850641 0.4741094165202 -0.268305687253773 -0.267804935518322 0.849376568522996
[+] Show/hide bicluster #56 motif PSSM #1. bicluster 56 motif PSSM #1 Mycobacterium tuberculosis H37Rv 22x4
POSITION A C G T
1 0.1875 0.6875 0 0.125
2 0.625 0 0.1875 0.1875
3 0.125 0.1875 0.25 0.4375
4 0 1 0 0
5 0.3125 0.5 0.0625 0.125
6 0.125 0 0.8125 0.0625
7 0.625 0 0.375 0
8 0.375 0.4375 0.1875 0
9 0.324066 0.519684 0.144684 0.011566
10 0.074066 0.582184 0.207184 0.136566
11 0.074066 0.269684 0.019684 0.636566
12 0.023131 0.164369 0.789369 0.023131
13 0.324066 0.019684 0.394684 0.261566
14 0.261566 0.082184 0.144684 0.511566
15 0.136566 0.144684 0.519684 0.199066
16 0.3125 0.25 0.1875 0.25
17 0.3125 0.375 0.0625 0.25
18 0 0.0625 0.9375 0
19 0.125 0.125 0 0.75
20 0 0.3125 0.0625 0.625
21 0 0.9375 0.0625 0
22 0.625 0 0.1875 0.1875 [+] Show/hide bicluster #56 motif PSSM #2. bicluster 56 motif PSSM #2 Mycobacterium tuberculosis H37Rv 17x4
POSITION A C G T
1 0.714286 0.285714 0 0
2 0.571429 0 0 0.428571
3 0 0 0.714286 0.285714
4 0.285714 0.428571 0 0.285714
5 1 0 0 0
6 0 0.571429 0.428571 0
7 0.428571 0.571429 0 0
8 0 0.142857 0.714286 0.142857
9 0 1 0 0
10 0.142857 0.571429 0.285714 0
11 0.142857 0.142857 0.714286 0
12 0.142857 0.714286 0.142857 0
13 0.428571 0 0.142857 0.428571
14 1 0 0 0
15 0 1 0 0
16 0 0 1 0
17 0.714286 0.285714 0 0 |