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[+] Show/hide bicluster #55 rows and columns.
bicluster 55
Mycobacterium tuberculosis H37Rv
22x38
[+] Show/hide bicluster #55 rows (genes).
bicluster 55 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #55 rows (short gene names).
bicluster 55 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #55 rows (long gene names).
bicluster 55 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #55 rows (NCBI RefSeq gene IDs).
bicluster 55 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
42
[+] Show/hide bicluster #55 gene upstream sequences.
bicluster 55 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #55 columns (arrays; conditions).
bicluster 55 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #55 ratios.
bicluster 55 ratios
Mycobacterium tuberculosis H37Rv
22x38
GENES Antimycin Ascididemin_Natural_product BZA Cap Cerulenin Clofazimine Clotrimazole CPZ DCCD DIPED Dipyridyl DTNB DTT EMB GSNO GSNO_KCN GSNO_menadione KCN Levo Min_med__succinate_ Mtm Nam NaN3 Nigericin Novobiocin PA824 pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Rif Rifp Rox Verapamil X_111891 X5CL_PZA
Rv0038 -0.161004232215146 0.263956472744216 0.564581302345553 -0.0744947024614081 -0.206422125455083 0.934540138531167 0.185659566722224 1.13065961962800 2.14115012851289 -0.112208761778789 -0.281617773582651 -0.796090793712693 0.489838810089521 0 -1.25601767143935 1.24013465707010 -0.223979085714454 2.59414646831979 -0.173459952491592 -0.541361103201403 0.088111204542899 0.298855292849149 0.684650248696278 -0.676131086570708 1.01359823031376 2.08997747101586 -0.297157401469057 0.210178995717006 0.161894619916078 1.81497006376047 0.355270090019989 -0.281670620288578 0.609368565763247 -0.159351819787545 -1.80363293112180 -0.486106029806173 -0.193171319362573 0.571908431179892
Rv0486 0 -0.0103159775176661 0.887880237141794 -0.750768687429724 -0.640316539106592 0.769156944134151 0.0334818375223989 0.506559053467628 3.37737327033719 -0.855510618966537 -0.0608767747238846 -0.593319152914116 1.42492212572631 -1.06771651498973 -0.488381747107349 1.6256432417732 0.109653983451928 3.91876957763625 -0.488245041981076 -0.723145333945024 0.0276882648972216 0.716612344448541 0.89539394222966 0.0113031912982294 0.704754340295406 3.06306340804721 0.200520530854822 0.0155823040818039 0.500921991819728 2.29474761644355 0.975547053639254 0.203323889840116 -0.364485747506215 -0.526547232008193 -0.717421098830854 -0.471146478486841 -0.126488300174057 0.59419417308569
Rv0491 -0.256276096702656 -0.153327934826658 0.60092943711025 -2.57836379923294 -0.673714180125521 0.514037763453751 -0.331135549504402 0.605462115904795 2.18311184261719 -0.463988304600326 0.102707965652849 -0.295368700742946 0 -0.454495166575545 -0.358241213702816 2.26504745863637 -1.45581435332272 2.94958213402294 -0.136818619011759 -0.956665445776218 0.383587549483627 -0.47773870621506 0.851254913299232 0.71203329029575 1.22476991892819 3.16146220252105 0.742226399946813 0.578962456731575 0.200378882112948 2.43319795599120 0.777074251500835 -0.223013550950927 -0.169323214954138 0.494173720197099 -2.13750751727056 0.091578881050092 -0.0814064118037828 0.130500943326616
Rv1076 -0.364060179045647 -0.493610966873801 -0.0267706787680451 -0.467514543320851 0.038297672808368 0.173378166864680 0.259157009691783 0.0589529237536247 1.16054777432957 -0.448410827854405 -0.0745860109120608 0.613551977740053 0.920702595611528 -0.0115060358803478 -0.117399954798305 2.53199694138772 -0.984280164239682 3.01388094142975 -0.33835478343955 -1.96518872952048 -0.544459836025299 0.0328943542437938 0.843348702030945 0.133893704824250 0.128976110863974 1.86692024504426 0.577107180428713 0.54799775827983 -0.0223510618282537 0.929267876039648 0 -0.191861201544899 -1.45085479901549 -0.783321639028997 -0.0344275559993008 0.559015673155613 -0.265705357565119 -0.380528503012509
Rv1594 -0.31297987699511 -0.0940151269655308 -0.560685047371422 -2.09025392187933 0.143160377952011 0.54819562081149 0.110734214758577 0.717431820097577 3.87990220747604 -0.194918366140868 0.115501719670223 -0.732695416681547 1.0558581686338 0.158412456789272 -0.424225630553857 1.14555878329906 -0.626355634500598 1.86775364577068 -0.445150194930792 -1.69717938391474 0.323553489021401 -0.130780834571585 0.600477484726665 -1.07359496117381 -0.261050703349589 2.18637207835405 0.699470051762048 0.30427498192247 0.233393328309250 1.93549112947251 0.334372864307117 0.131718873594391 -0.939015544406742 -1.5441408709944 -1.90665928157715 -0.778351138200166 -0.49862567347321 0.422507995639219
Rv1595 0.0725159121965702 0.425208527690894 0.0199159233593966 -1.73603415131554 -0.0496723555668897 0.704209412651283 -0.165891498473662 0.6114425977681 3.41046883797518 -0.128679819273230 0.148477615893873 -0.368244166496372 0.594395832559345 0.0759526394913086 -0.185659265461377 1.17908977990053 -0.864223446929052 2.63860696687944 -0.515509536946086 -1.62804957793789 -0.0825377051645444 0 0.731823067800241 -1.12376073851917 -0.0159005698895901 3.08807513549728 -0.240996742550327 -0.331697215687822 -0.334213052471724 2.79790528492958 1.15142163012180 0.453127329649402 -0.826212345627835 -0.655561259728831 -1.75065559692627 -0.286595058996284 -0.386369269837396 0.941992735762155
Rv1620c 0.133497686048488 1.08194118694418 0.0752934233867566 -1.16833846921946 -0.645893003406047 2.60374868753406 1.51562077059510 0.805245834758762 1.97364993778947 -1.30303625547481 0.74818881443111 -0.299022134743114 1.21789939314495 -0.796262070297665 0 3.28219916216493 -0.216653110614757 3.17953089955158 -0.291656350802434 -1.21382154578129 -0.619331600424031 -0.271424803155053 1.50164778949562 0.791975819461636 0.942021749570808 1.40463034293457 0.0614695445077236 0.455790028039392 -0.0290479299000699 -0.224366132003296 0.0218364134374092 -0.403682742953513 -0.474980320342898 -0.111848855683774 -1.61786285618675 -0.222459858552761 0.343274824577626 -0.572611397180876
Rv1621c -0.0943308786365419 1.17532151182143 0.339890932418028 -1.37573157095954 -0.590917663372533 2.06934963781643 1.14528040416441 0.424895236649153 1.63716105044692 -0.149481583839909 0.844464013627843 -0.9735909802613 1.93792522448793 -0.214687139647704 -0.139274260288207 1.52690672743327 0.0377550567005811 3.29495762234296 -0.854216955919431 -0.0223784431360457 -0.445349709342205 0.119362031150014 1.93517319496652 -0.21108847552592 0 2.65751561736451 0.246818638862737 -0.109297387243446 -0.114976740651014 0.488251952040598 -0.166578290088056 -0.235401373801009 -0.686396281908363 -0.145921399365397 -1.76613566550633 -0.586277124980108 0.523818937745119 -0.0900420104957608
Rv1622c -0.305131489608548 0.671004637166528 0.542290079802522 -0.538976955025248 -0.505959545164214 1.79047281327020 0.814343515879814 0.644529156802884 2.54062430011818 -0.799375459712576 0.560366131979924 -0.371221531818263 2.25270268884066 -0.534153853886976 -0.304532184896237 3.74864255398095 -0.915813400054202 3.55656365914424 -0.547001886495261 -1.38009668647691 -0.22796495579394 0.419418893697256 1.10746374556281 0.496691726004394 0 1.92255972692397 0.166286988808330 0.563388240516953 0.368255030453309 0.068805427712843 -0.638466522343884 0.294180668175397 -0.274546873500427 0.0171719300530099 -0.840472241306642 -0.6262534721978 -0.108873621498258 0.841008654565441
Rv1623c -0.353628376017436 0.619479692378325 0.782025302107142 0.181952233849852 -0.698859424382803 0.779242865194106 0.398638273830557 0.268279502736564 2.09089543644884 -0.427371150843484 0.280081567118571 -1.05055770186983 1.91446108912356 -0.750692783480996 -0.37280970635551 2.79321002045087 -0.616735336464414 2.95258307624186 -0.351110785681802 -2.37520215866011 -0.761531264623425 0.63369400410676 1.74950089375056 0.722430092095357 -0.344314213247439 1.71688409995913 0.545305888184415 0.377363549114384 0.236844673879770 -0.119257215193328 -0.690187627360435 0.961107958900315 -1.32412490465138 -0.507467746825224 0 -1.56687183442083 -0.0730185162050344 0.9119693752014
Rv1625c -0.065655582418212 0.394611037539231 0.742052192916346 -1.38977676790658 0.193709000523439 2.00041102961221 0.751058109320878 1.77067452808813 2.23512318034046 -0.253307244467121 -0.0108772868182047 -0.132721057814692 0.835859152463252 0.694884483688787 -0.15469469385906 1.26701106668505 -0.41049426365722 3.20091644229372 -0.312316170196384 -0.167471988532103 -0.708767023466968 0.342295448029934 1.23900771108250 -0.218790989457571 1.87984541789561 2.03560085760847 0.64040702995992 0.905554304690105 0.177975493881019 1.28186884764830 0.327047201132564 0.383936766466359 -0.193008290950642 -0.431814058184834 -1.36972704811811 0.0471617559989697 -0.152610856964971 1.62971322622771
Rv1653 -0.0174281586234624 0.387960284081379 -0.169806008037178 -1.46088553250440 0.183512364162968 1.30686864864551 0.895662695249872 0.222931853689359 2.92155648394296 0 0.272269788212493 0.406816604404309 2.99445438041984 -0.40553689768564 0.625662647962513 0.207216588729319 -0.834038158292489 1.80765733385456 -0.765471620452802 -0.915637554067579 0.525657214083595 0.351953332229709 2.61638456428807 0.681242969853748 -0.378125790006841 1.21585221534219 -0.808920750754325 -0.0848995749569561 -0.186392412898412 0.910863673106781 -0.150083266118082 -0.333478490650006 0.246488058452736 -0.204544535213474 -1.58381026745524 0.167530302615969 -0.0838048036874622 0.643170718732163
Rv1654 0.0160341385729941 0.411934372572052 0.414948058968598 -1.96145783235274 -0.388866110302698 0.587212304059572 0.230238818247003 0.227779851534501 2.30702446140794 -0.399436472049781 0.0519763635977956 0.439182433089851 2.68120766194048 -0.417617296596435 -0.315709276839707 1.49190050374455 -0.635879119541886 1.67041930355184 -0.41284116360173 -0.123470401764809 0.233123201355292 0.709267654528204 1.76526263485896 0.379582447092944 -0.578819771341057 1.07010615259579 -0.169146781598310 -0.193111582989918 0.254357139308903 0.62350326548517 0.0907734114530967 0.236950386639757 -0.212724561888575 0.151668342180599 -1.45424585197846 0.183151410413766 -0.280313215655353 0.468450213235956
Rv1655 0.356552930341339 0.652672924657407 -0.317617764616012 -1.30379410384287 0.203978054875309 0.741492196862725 0.631303501650171 -0.329136967313917 3.31845894298714 0.00125342604485939 0.623978970714765 -1.31274086255118 0.704812862896061 -0.217813935942751 -0.126775704089792 0.418723086159881 -1.57787711990060 3.53280235985003 -0.257015594419497 -0.676103879310937 0.334088789253543 0.0736720715749601 0.912384684136525 -0.44403132973064 -0.982589560566417 3.22653632495001 -0.625428422093376 -0.369332435164143 -1.03371529188247 1.08624483124712 0.392189299148046 1.18776640864934 -0.995488552163205 -0.231080511318342 -0.867516521771137 -1.13748548016709 -0.288600679561363 0.864103622108736
Rv1845c -0.712328875011293 0.404225599300899 -0.184564514551287 -0.758083146041797 -0.898039092740559 1.43193999792065 0.511245636850216 1.36812363125695 1.79698138325993 -0.786614174898256 -0.0209546250951266 -0.750592886000863 0.274792400261665 -0.609490617846363 -0.243809394227469 1.36770304653401 -0.720438970002444 3.47780768785684 0.0312015071826041 -0.498160546878119 -0.631938452710683 -0.382363314352145 1.22980306499866 -0.416032695093543 0.56608349270019 4.20705447802394 -0.355802496555885 0.072420606101897 -0.39380766888301 2.07837188408561 0.910885329495538 -0.373953564146993 -1.21980607315276 -0.237530731210874 0 -1.02900643945671 -0.245095242067381 0.0719505093383431
Rv2444c -0.131279823335373 0.98991519331794 0.418463520733232 -1.04151529056492 0.0503683816963682 1.45575207244377 0 1.00616833535198 1.93194832445205 -0.330405653999477 0.327350856197922 0.131126187788347 0.956488380257087 -0.134963740549269 -0.00184646279332241 1.72242367271565 0.699525421778739 2.24190372039948 -0.465188406875334 1.19216592239981 -0.485513169348134 0.330198929814152 0.488689097224232 -0.129843929514294 -0.0598805477180889 1.73757633630739 -0.317497108049872 0.155307447909482 -0.0189798103708637 1.82747975496031 0.817847699746806 0.0907223053136459 -1.01690361002691 -0.81409371861068 -2.03662889127027 0.274732934783863 0.128031669829772 1.07409372255761
Rv2537c -0.156662558071545 0.181423641139317 -0.360046278633076 -1.94577070664801 0.597532311020228 1.22838963778829 0.84044048801517 0.642801221299337 2.2119175953128 0.44601680649898 -0.377469158323591 0.617571327803616 -0.0646186248489604 -0.479617400333405 -0.531075943335874 0.656743556990707 0.302701882579311 2.96466964897354 0.00355723926114276 -0.677303841491602 -0.698824697503631 -0.481707444337942 0.434766126963566 0.0577329755303098 1.5179581683803 1.71606958734754 -0.548918636199182 -0.80984638627858 -1.20627670924821 1.79468757639472 0.56175049471412 -0.379492403686559 -0.248664162318457 0.121548684443077 -2.90345705740002 0.472175738735894 0.0668031465881569 0.417408252654564
Rv2539c -0.473704925384823 0.269955606033425 0.502209869254545 -0.638763537394383 -0.329704288836755 1.04001508471311 0.051221847599453 0.0353954956537356 3.23311057441730 0.470854617572695 -0.505982126130689 -0.242767491253905 1.57169248079675 -0.0357739108171939 -0.730661926909144 1.44458081216243 0.149601533794483 2.72840065366900 -0.168963764286363 -1.05023786198994 -1.42909596686047 0.0565793356803861 2.74336511430747 -0.185658411561706 0.834084994354916 3.65682396883921 0.00370937723607345 -0.582158433818195 -0.904826603316654 2.1416257656715 0.799093925385074 0.229694772214013 0.644222215394908 -0.431704431725487 -0.904327442153808 -0.220503076818353 -0.680232330699381 0.445094179866915
Rv2540c -0.0595101501499991 -0.127379163274408 0.567690175045211 -0.486856084716692 0 1.39003162731419 0.465631597332265 -0.129818207766503 2.81406751150978 0.247751526964409 0.0703321122188815 -0.0516618680577455 0.569908325831047 0.140759748840015 0.381080076537899 1.90414447555910 -1.00821742575343 2.40502617768226 -0.150333865138949 -1.30981990353347 0.592681762321787 0.591064193247651 0.241027466714563 1.13271367769103 -0.422281310414768 4.82927539961439 0.161111355067242 -0.102492965402534 0.432487849892821 0.955100432932796 0.575523771633095 1.01949918446427 -0.388687338713356 -1.14075554249115 0.341981083876143 0.678620960990655 -0.160772588889131 1.88100807197664
Rv3212 -0.460468956290585 0.664928982540421 0.223951609936226 -1.86935350840239 -0.395709370715159 1.31504352176764 0.0490874117024744 0.718927069495057 1.23910982852990 -0.269183118113602 0 -0.124557746177219 0.300823295023726 -0.343680531931564 0.190166168136227 1.42564548576693 -0.0718773451039098 2.49706144236631 -0.235551282331737 -0.252320804870947 -0.132837812613362 0.0107913697555566 1.21063100433700 -0.422769638259352 0.278840957567596 2.4803051468895 -0.979834399784598 -0.753964831878867 -0.606830975486686 2.8077996293902 1.02764768739460 0.108339378752033 -1.12224873673889 -0.456890369922046 -1.77410125972675 0.156208901164694 0.274068237025843 1.07173186380661
Rv3411c 0.0324236445785776 0.185220724603460 -0.115964855995728 -1.03505671276995 -1.35016028443643 0.701064822233831 0.137778772131476 0.199918542714108 2.57067833210041 -0.193241235024249 -0.186486945175985 -1.67031489275923 0.492628427269764 -0.0937523934908732 -0.514820366993712 1.02622975725897 -1.21392427614298 2.95730905630374 -0.177966350116718 0.0165060839580483 -0.0133059667311882 0.281499620912366 0.624472232084578 -1.01098266140401 1.92497132347784 3.32552849677850 -0.453737496690576 -0.520800049828304 -1.09265953994354 1.75400916549083 0.813942260043217 0.88650177968582 -0.865320473442646 -0.171433010942146 -0.244361018323159 -1.34574255786168 -0.834814250554225 0.211390607022875
Rv3627c -0.311676851585072 -0.0213755455137362 1.75483636005559 -0.967866680927963 -0.262744300795564 0.807184364172458 0.234088887746881 0.930724945455743 3.29833429571419 -0.40831625290505 -0.352108258538842 -0.86992796537496 1.05334478927678 -0.381856861624266 -0.39719182394847 1.46567842599322 -0.104721649305049 2.66128259960986 0.157728952506169 -1.27417061794086 -0.0600163933853884 0.84033585174802 0.916142098660225 -0.301840659684812 2.10995487679014 3.08623599312427 -0.354488577338196 -0.557554217094218 -0.246360805067322 1.54267619463078 0.0451158303509471 0.97447500888209 0 0.166851910171201 -1.66688060813013 -0.415341602287949 -0.401805958252778 1.32820013084237
[+] Show/hide bicluster #55 motif PSSM #1. bicluster 55 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.2 0 0.8 0
2 0.4 0 0.6 0
3 0.4 0.2 0 0.4
4 0 0 0.6 0.4
5 0.2 0 0 0.8
6 0 0 1 0
7 0 0.2 0.8 0
8 0.4 0.4 0.2 0
9 0 0 0 1
10 0.4 0 0.6 0
11 0 0.8 0.2 0
12 0 0 1 0
13 0.6 0.2 0 0.2
14 0 0.8 0 0.2
15 0.6 0 0.4 0
16 0.6 0 0.4 0
17 0.2 0.8 0 0
18 0 0 1 0
19 0.2 0 0.2 0.6
20 0 0 1 0
21 0 0.4 0 0.6
22 0.6 0 0.4 0
23 0 0 1 0
24 0 0 0.2 0.8 [+] Show/hide bicluster #55 motif PSSM #2. bicluster 55 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.142857 0.714286 0 0.142857
2 0.857143 0 0.142857 0
3 0.285714 0.285714 0 0.428571
4 0 0 1 0
5 0.142857 0 0 0.857143
6 0 0 0 1
7 0.142857 0 0 0.857143
8 0 0 0.571429 0.428571
9 0 1 0 0
10 0.142857 0.142857 0.714286 0
11 0.571429 0.142857 0.142857 0.142857
12 0 0 0.428571 0.571429
13 0 0.285714 0.285714 0.428571
14 0.857143 0.142857 0 0 |