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[+] Show/hide bicluster #54 rows and columns.
bicluster 54
Mycobacterium tuberculosis H37Rv
14x37
[+] Show/hide bicluster #54 rows (genes).
bicluster 54 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #54 rows (short gene names).
bicluster 54 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #54 rows (long gene names).
bicluster 54 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #54 rows (NCBI RefSeq gene IDs).
bicluster 54 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #54 gene upstream sequences.
bicluster 54 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #54 columns (arrays; conditions).
bicluster 54 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #54 ratios.
bicluster 54 ratios
Mycobacterium tuberculosis H37Rv
14x37
GENES Amikacin ARP4 Ascididemin_Natural_product Cap CCCP Clofazimine Clotrimazole CPZ DCCD Dipyridyl DNP DTNB DTT Econazole GSNO_KCN KCN Levo menadione Min_med__succinate_ Novobiocin NRP_1 PA_21 PA824 Palmitate pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 Rox SM starvation Succinate Tet TRC TRZ X_121940
Rv0342 -0.519807617209836 -0.279505583939063 -0.150504569079472 -0.215418912158047 0.710649722362849 0.980974028959327 -0.183819961822988 0.289235915169511 4.73479058482293 -0.443044420764183 1.44896253612825 -0.228511810855012 0.718642005250845 -0.0927046509620453 1.18121568078811 3.73095618335401 -0.592595133018548 -0.54462427122127 0.187875690563209 0.744074375816053 0.419009681581398 -0.482484032624353 2.49252982517008 -0.322019904579939 -0.0168635394385617 -0.0416183588562912 -0.183879096946679 1.08491962688473 0.0305631157603934 -0.0448608779069467 -0.237220567902012 -0.23227438144735 -0.614728563575032 -0.446556122644661 0.287043512562934 1.35968540043430 0.0502601468904898
Rv0410c -0.410438277460112 0.15404786414709 -0.328021233383972 -1.32206087168152 0.153650827669408 0.446308101320508 -0.0712299993253029 0.39723751414546 2.75492630832212 -0.465020410250331 2.55989447274553 -0.166506541608465 -0.886876823464989 0.084988508504546 1.87932600003952 4.18427843479858 -0.123494456534877 -0.0522719902541284 0 0.805114599712303 0.658357364039312 -0.175535366876351 3.97910735860080 -0.729551075650875 0.419582591665472 0.0757745946017623 0.0524051350420526 1.21002229376134 -0.317884675688979 -0.754874744718813 -0.620296722976222 -0.851429519999342 -0.579694322657325 -0.574410616148538 0.691536246190451 0.932789432368588 -0.754424400194392
Rv0411c -0.865128911589739 0.17851819454729 -0.166023387797674 -0.970349434015265 0.84749966972226 0.664386793012082 0.134128297603354 0.930042714695968 2.83638941752138 -0.300787771063532 2.76726703224613 -0.116587376586876 0.399138620675451 0.270569786593610 2.17193313806381 3.91766778184341 0.214283304003072 0.284868720664441 -0.381844102279831 0.389076492721806 0.97837263437809 -0.0350765695909243 3.34806539524488 -0.614473830056574 -0.161201321465545 -0.205078687255703 -0.366332965060939 1.06634651592641 -0.324637013650073 -1.17311269792616 -0.632585558881818 -0.518706002563482 -0.689847165583491 -2.75778782084524 0.826742673961625 1.29497227717949 -0.447655400341601
Rv0412c -0.324650511047738 0.785073379029318 -0.26255670203621 -0.99260641915938 0.90869482501305 0.65450791232852 -0.250981478333417 0.65743134895518 3.24485379172198 -0.0832169174530621 2.94252057024622 -0.262444825932331 0.0605496902842833 0.0266474011255845 1.9058106321138 4.55821641655616 0.246356318094772 1.12166636648061 -0.34819118818227 0.480216131168810 0.765405226345175 -0.42246879085761 3.45279087096909 -0.919045828706685 0.181120521967378 0.0706620928965402 -0.0923732948289542 0.824123427893474 -0.3381117659031 -0.70228124213034 -0.111906177084994 -0.202607217555482 -1.1093898966219 -0.400447103504756 1.14269126124093 2.13107256332045 -0.488958250501911
Rv0486 -0.86270484032496 1.22041816144214 -0.0103159775176661 -0.750768687429724 1.28801385938790 0.769156944134151 0.0334818375223989 0.506559053467628 3.37737327033719 -0.0608767747238846 1.28976720051044 -0.593319152914116 1.42492212572631 -0.145545361738554 1.6256432417732 3.91876957763625 -0.488245041981076 0.379864032880593 -0.723145333945024 0.704754340295406 0.540002451593296 -0.313874067787217 3.06306340804721 -0.368388076909555 0.200520530854822 0.0155823040818039 0.500921991819728 2.29474761644355 0.975547053639254 -0.717421098830854 1.19216023370671 -0.733994097194765 -0.656839144788687 -1.49546046849977 1.12606104688045 0.787259125460269 -0.270613392923785
Rv0865 0.154399886872434 -0.647574120436263 -0.45312220989199 0.119456265635954 0.615395429144334 0.648545594159015 -0.121496456960147 0.170566209492413 4.02498899792928 -0.141919627273709 1.41217932822940 -0.940697133535115 0.229099259322688 0.702177940090987 1.21151575281502 4.08594763772495 -0.0129583914200139 -0.431881149397586 -0.365156497961146 2.272105896502 1.25875725437962 0 3.35348610222598 -0.690410411037147 -0.590289718558063 -0.406848558317992 -0.618238136564075 2.18005719680745 0.587868973995595 -0.676457141136667 0.059829340711546 -1.09655603783719 -0.663326323436968 -0.675702086114298 0.880378978355931 0.421409900068205 -0.335856108778161
Rv1600 -0.959074121273017 1.06334673221728 -0.488081498273466 -0.443519480107106 0.983548798840266 0.131737888857685 0.159165930806822 0.222350376332053 4.17058286956564 0.135576085362009 1.74307449989156 0.0299862276736506 1.01878579772834 0.0108008679169097 2.30426221037971 4.02105511467123 -0.302506693240231 0.583295750633227 -0.173452828583164 1.09353814565577 1.01034118793283 -0.0824164675763033 2.61283826004482 -1.06180221621611 -0.640335752295244 -0.196313720347601 -0.432191267663864 2.39482153587169 0.54415636517711 -1.75294213974548 -0.260251901544820 -0.447548036670989 -0.368290100229529 0.149249390009163 0.450274083077846 0.343661237466195 -0.158659798790762
Rv1601 -0.985333903017966 -0.0134903101067038 -0.375622595385559 -0.573137411132716 1.13667630280087 0.318256017098965 0.251224874999185 0.435171503927675 4.39014389409548 -0.843484944154247 1.96787442258874 0 1.17425002394197 0.0874672305771155 1.09493271088744 3.33115774841198 -0.185587204690959 1.24512778338303 -0.644250255794893 1.09773585738463 0.974418453057171 0.179618746914392 2.10953652478757 -0.459179404087362 -0.914872953481098 -0.642809776490242 -0.602331380121483 2.04812123116543 0.543816061822908 -1.96760635649485 0.193351148678785 -0.95954112902624 0.0798442191123917 -2.29698706671629 -0.092025632403007 0.900449780187733 -0.210823544137672
Rv1602 -1.3366427112462 0.780622034566266 -0.354031501708789 -1.20058381313097 1.46718122727149 0.622719057033651 0.0913341963986235 -0.0711412396943283 4.0459418570853 -0.0967741437063806 1.65852594023145 -0.255224529541937 0.816783083283827 0.483299007394815 1.95902884650932 4.31819375897322 -0.183799710823183 0.371198455443594 -0.229845318174340 1.47577562398292 0.411891923120619 -0.333818111051336 2.79980860918662 -0.342385315708007 -0.319236970369023 -0.352546879793049 -0.404088186975975 2.25292295142916 0.917514513776339 -1.54163990904967 -0.339943223498189 -0.248482295330218 -0.408577968420376 -0.638972633484863 0.172512328287137 0.509715578546225 -0.590224525681617
Rv1603 -1.13770576662150 0.265326094579589 -0.355762025477131 -1.45145616146262 0.705285081515864 0.606077166559834 0.197747656258103 -0.0147379732567547 3.66082144403642 -0.383898023392904 1.53984380290565 0.07030663316963 0.6842755222776 0.103626984888935 2.14040395102006 3.79306318624407 -0.381140397243118 0 -0.565436474974703 1.18615949818467 0.263795853292116 0.00678893180949458 2.62333266203928 -0.307620086110287 -1.12136432138831 -1.18344954046592 -0.888597463379506 2.00213603471857 0.984929486322289 -1.89584243734641 -0.400246925571931 -1.03990287681638 0.174784181543208 -2.63026700892687 -0.288318801840353 0.416585464645586 -0.214103235807222
Rv1605 -0.219213087680454 0.831193219076967 -0.215242717979486 -1.07137955523193 0.777279888047819 0.250335891456335 -0.0813967375197288 -0.0298841629434025 4.26413262578373 -0.586490600775868 1.81405601369703 0.0540209110641738 0.767960903147157 -0.255915881036586 0.517045045351613 4.57570926714355 -0.775653100348999 0.298113234686247 -0.208867076919678 1.03396992178765 -0.24797830486303 -0.0653798394769294 2.43661928854462 -0.393790283481698 -1.45236553846476 -1.33354838202128 -1.18702782743905 1.80607771023045 1.08224730075523 -0.760133748907955 0.214217330198993 -1.01408969853049 -0.000405659299643102 -1.14914128114221 -0.497523687268866 0.294908473362766 0.188589938937169
Rv1606 -0.996326283044274 -0.0413450470072593 -0.274535232316426 -1.92349686248406 1.05750536305625 0.399078475507551 0.0786524118381282 0.30444050889864 3.71535935619908 -0.48256014097784 1.92539439260138 0.000725185754332682 0.94316248481335 0.340632517556871 1.97722368707483 3.98927927379978 -0.281880346400864 -0.101197649448323 -0.669278665091909 1.25610369524270 -1.06170234005859 0.0256250760416991 2.2253790085017 -0.529956849575179 -0.154650178924517 0.348427551240881 0.445108751467333 1.96166767840169 0.820237544819782 -2.28614429484563 -0.898067947408202 -0.876975421513508 -0.533380956276701 -0.757500167577696 0.522496941278417 -0.0227865346215591 -0.452697385166216
Rv2234 -0.622712635212298 -0.647211057512144 -0.0984952906232798 -0.702678546074015 1.42113182437266 0.651297380171833 0.0782886977439322 0.406595108799666 4.43530923981168 -0.279937849501839 2.18672740869466 0.139517351632171 1.29889381388194 0.602432127258286 1.95041334199253 3.54785045348143 -0.136269293387533 0.641934627609939 -1.18856680071619 0.520166267656088 0.922493577865338 0.0500634079030555 2.74586646382380 0.199398709648709 -0.809610827695793 -0.114768381817733 0.0950084214345907 1.79230068761136 0.477051233648738 0.15145170204774 -0.355242316280494 -0.0546299859216229 0.520152681216936 -1.69914314430513 0.588880236448327 1.27548513990541 -0.0482205404151824
Rv2235 -0.725351222816145 -1.52024093726911 0.123046832164027 -1.56631992389035 0.818864937734428 0.975290094358251 0.320051094348613 0.624103333376499 2.90473099592209 -0.642352635179715 0.950351030748407 -0.470128750567890 0.434490983083669 0.607519654956356 1.78270334994215 3.39247042270599 -0.48773963300835 0.307651565312867 -0.225772739652151 1.01171523172940 1.22906997497368 0 2.85493402416387 -0.0592526847236204 -0.360546173263361 -0.86077284321871 -0.6026578262282 1.84550590758945 0.236069375804391 -0.991715425538634 -0.446098122876503 -0.153808331525523 -0.0368383031606467 0.231726455683582 0.212985396932331 1.49620086744365 -0.672489570270396
[+] Show/hide bicluster #54 motif PSSM #1. bicluster 54 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0.4 0.4 0.2 0
4 1 0 0 0
5 0 0 0.8 0.2
6 0 0.4 0.4 0.2
7 0.2 0 0 0.8
8 0 0.8 0.2 0
9 1 0 0 0
10 1 0 0 0
11 0 1 0 0 [+] Show/hide bicluster #54 motif PSSM #2. bicluster 54 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0 0 0 1
4 0 0 0 1
5 0 0 1 0
6 0 0.5 0.5 0
7 0 0 1 0
8 0 0 0 1
9 1 0 0 0
10 0 0 0 1 |