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[+] Show/hide bicluster #52 rows and columns.
bicluster 52
Mycobacterium tuberculosis H37Rv
24x37
[+] Show/hide bicluster #52 rows (genes).
bicluster 52 genes
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #52 rows (short gene names).
bicluster 52 short names
Mycobacterium tuberculosis H37Rv
24
short_name
[+] Show/hide bicluster #52 rows (long gene names).
bicluster 52 long names
Mycobacterium tuberculosis H37Rv
24
long_name
[+] Show/hide bicluster #52 rows (NCBI RefSeq gene IDs).
bicluster 52 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
42
[+] Show/hide bicluster #52 gene upstream sequences.
bicluster 52 upstream sequences
Mycobacterium tuberculosis H37Rv
22
upstream
[+] Show/hide bicluster #52 columns (arrays; conditions).
bicluster 52 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #52 ratios.
bicluster 52 ratios
Mycobacterium tuberculosis H37Rv
24x37
GENES Antimycin ARP4 Ascididemin_Natural_product BZA CCCP Clofazimine Clotrimazole CPZ DCCD DIPED DNP DTT Econazole GSNO_CFZ GSNO_CPZ GSNO_KCN GSNO_menadione H2O2 INH Levo menadione Min_med__succinate_ Mtm Nam NaN3 Oflox PZA Rif Rifp SM Tet TRC TRZ UV X_111895 X_241 X5CL_PZA
ORF04372 -0.0457816865036649 1.26313143796152 0.00344323580034993 -1.58931440603847 1.06319302116382 1.85980658785948 0.523887268038782 0.549775858280183 2.44290538773464 -0.700631385056866 0.763243168166621 0.586823256185928 1.73856443750588 0.37338062978605 1.14291435219479 1.41669087334618 0.0591123926554632 0.176239350281223 0.0925183492918532 0.25328357626 -0.259150825818902 1.12188887952029 -0.62728284249139 -0.88850474490455 0.479095347463669 -0.238985128931385 -1.02624732727797 1.47074742475311 0.687569748552565 -1.08274437116329 -0.307254421768430 0.174367041295538 1.87810847580574 -0.84499054408848 -0.0780008726208674 0.862242837159783 -1.45826266822592
ORF05444 -0.121973927315472 1.84150990693618 0.679235790417133 -1.31435542932172 2.03770217035802 1.29314587387557 0.163476242861814 0.350920358360684 2.00662341065347 -0.784112515975131 1.92020356692423 1.79925096250256 0.15543666192418 0.348347633021860 0.63463176830606 1.19039056125845 0.464094078569269 -0.709897770363586 -1.12321458294176 -0.388849730748956 0.433577316850123 1.57377157834846 -1.61953998919804 -1.62482473576064 0.610974563802234 -0.433995619667172 -1.78833223303644 0.228776618945306 1.08166772659521 -1.26443544930564 -0.187510511537003 0.329908491898634 1.31127893638178 -0.879091253494473 0.432899744652850 -0.238342565775226 -2.01131155121555
Rv0571c -0.511725526138325 1.90153485392816 -0.034258251133951 0.111839229507060 2.91162753423254 0.324587448056282 -0.711358885413206 0.643620757448736 2.44929479932801 -0.177420877681725 2.47424967664116 1.23258695093571 -0.497168392089722 0.572537165689275 1.45775432945172 1.08251871969743 1.07964029335201 -0.576765929679636 -0.881283684405887 0.724781857240078 0.305966046299198 0.782032332680929 -0.681980024170614 -0.0277026538798469 0.221099610597062 0.887679027944981 -1.03074758061424 0.89336509447782 1.51949791952522 0 0.271048728671892 1.12140781732289 1.08871400684545 -1.38915089848573 -0.186431141972993 0.51271156351149 0.373279889119622
Rv0960 -0.90501257675949 1.78945279668278 -0.0187065672382695 0.00228968893845930 2.46524202817634 1.45485031885958 0.154629421681276 0.837253075088875 1.1451474111624 0.0682344511601494 1.93122870512917 2.02393800641951 0.0516080071320042 0.97422402424101 1.27836080081062 1.00126165741377 1.53006858824760 0.302716345718855 -1.31802321789740 -0.467276564460217 1.35793381417271 -0.0353077157733234 0.00157196468538991 0.204483209044879 0.410276417475535 -0.55873575399477 -0.524165452588724 0.74244934132359 -0.0583056569031735 -1.46010027540851 -2.0224957187449 0.229647235625289 1.81115474008627 -0.352352151988589 0 0.981980855987852 -0.267978362316777
Rv1065 0.0114003607751927 2.45221628250351 0.049927521914222 0.0686709040852829 2.06197419882443 0.380021825429916 -0.115004810212347 0.195586265430572 2.47606787730162 -0.530508412771741 2.80034895665222 0.819363732254229 -0.412149357616953 -0.165949668176368 0.231188681100399 0.256866489806011 0.519127295442726 0.255002139106485 -0.677521823671735 -0.515727448120364 0.111725548311661 2.45712343612802 0.0883741672189089 -1.08580110454408 0.0124704062417800 0.0947985470575727 -1.22813863085956 0.740394373198364 1.29058705555676 -0.076954424164645 -0.573399995954715 1.02044543577286 1.18204646056536 -0.552963058930523 0.285348505641608 -0.0365424640518513 -1.68512849211382
Rv1239c 0.530952390424913 3.29175857329215 0.486974741971376 -1.27337595790554 2.30618355863548 1.29563948495602 0.893244243526076 1.04647814454709 0.273742560305982 -1.50871490850815 2.08168140606631 0.233165480018648 1.22900929821423 0.00169676962138412 1.17935244082173 1.33894938443363 0.333859715353085 -0.395117416630818 -0.0889475534713964 -0.428700513167998 0.66753218643379 1.4554337707479 -1.54007224177018 -1.31282754073112 -0.316483306922475 -0.816567171040868 -1.31103909145559 0.160156845784981 0.435079677922468 -0.618373929005324 0.774343741942925 0.56127201091857 2.74854654454214 -1.28178192928956 0.230743203039289 0.416618382338144 -2.15091801133683
Rv1331 -0.90305927008752 0.0471477577729706 -0.527978375573742 0.542495566756181 2.29018165803769 0.235488576539079 -0.54494458401358 1.51440618724493 0.974263639465385 1.19759666383909 1.96104217561957 0.745166475015902 0.0107220920606828 -0.106664157294576 1.8591321686721 1.86784928997272 -0.13579871844494 0.134940444215668 0.385978922052711 -1.03386663897277 -0.0421484363311174 0.82991045492288 0 0.414654451239955 0.666379830490577 -0.323114255361061 0.148644717147649 0.658985590937412 -0.00352887101408055 -0.59246543005319 -1.17389215202077 1.10731486260554 1.48449913061828 -0.161759900163788 -0.332777197559508 0.87894268758012 0.388176266885856
Rv1487 -0.772223365499114 1.87484510948865 0.108936721893028 -0.638316584889254 3.47736336801038 1.14072460348620 0.0675523039806594 1.42536486787618 0.915133726272899 -0.473937989960945 2.12095334569665 0.536739251233372 0.220811464358812 0.105192433149763 1.70485661407791 0.120262558536707 0.0723677576048494 0.170740598972979 0.582242812741881 -0.151065002181232 -0.0661654259197747 -0.0770207324520406 -0.613615606175265 -0.815007775642699 -0.122076676654674 0.273733979624158 -0.93869874923269 0.337428271003513 -0.573289807028486 -0.260425612230664 0.403205030684676 0.42754850969184 2.25119398838781 -0.327213710444278 -0.0483260662793169 0.710441750406723 -0.81771588316577
Rv1862 -0.229426703272721 1.81219702933033 0.421706631932148 -1.07398491922373 2.23396819850481 1.29128883352917 -0.0767889498993198 1.75429103411627 1.36880699049716 0.680467729609811 2.24073534463705 0.675342601050431 -0.0216028481259117 0.613595134245646 2.06694169040678 0.703483833517223 0.154094249697721 -0.0482572346411579 -0.82958459556769 -0.536753769241097 0.594361718125693 0.710362164386925 -0.61002978403578 0.121912580805815 0.82163340891834 -0.669622265521637 -0.313793852350150 1.4102222476898 0.327672044861422 -1.17594425097871 -0.139126544539408 0.969077718729041 2.50798160880808 -1.43956275217145 0.335817816315301 0.394651102466583 0.182617759928258
Rv1890c -0.286709697831262 2.35386139371762 0.670351099063888 -0.792593552945589 1.91543737923188 1.30998210248490 0.0857170229825852 0.293496544508380 1.90701451987589 -1.36695335754236 1.70474028771018 1.63960448733818 1.00899938478312 0.078688137960491 0.856481210696504 0.765447623283633 0.326109803134321 -0.601991682428147 -1.92801181773487 0.243477946121704 0.36299393584868 0.425252560969164 -1.22249906431201 -0.72202618952978 0.38973341128171 -1.27747209466386 -0.648009277391075 0.489246429930001 0.530774317142492 -1.69922591526223 -0.0497411384927548 -0.0261036533451401 2.13540134835115 -1.78682072208409 0.350155307618693 -0.0597475532905261 -1.12761065193440
Rv2133c 0.296751935114629 1.42774212031506 0.694368764443477 -0.859866668769647 2.15354990935138 1.35971024587539 -0.121655163044434 0.318454025114644 2.50431709803417 -0.377637125492342 2.20797306390755 0.516664316728181 0.414161776795996 1.13935272469176 0.0619361814515091 -0.250913696817621 0.159707302852072 -0.443641332508705 0.356181957506795 -0.0547676163474874 -0.342007188144681 0.237455072353971 -1.16688670352936 -0.815023491133785 -0.808033599774595 -0.301406025061720 -0.728154176951883 -0.132921767562916 -0.244609331938116 0.175360718857220 -0.575157094639151 1.03615844116272 2.07449639475514 -0.346364489589384 0.475505179483407 0.509179614291099 -0.827504885801075
Rv2134c -0.374646511213972 2.74662597343655 0.652747226380508 -0.784692760040475 0.923172946909524 1.05612493749833 -0.0649098298360937 0.990302927516687 2.76464855417292 0.0208154310928268 1.80096028259192 0.594486545852344 -0.190688374358816 0.170964111552064 0.874898744827356 1.10147491961108 0.0313334957389873 -0.00363257193346933 0.649497031421407 -0.705345981124167 0.214768762259169 0.328311933506137 -0.290967701402862 -0.413730582207803 -0.0392577286934677 -0.192315461722016 0.394560728372163 -0.0491724512941081 -1.74857168753072 -0.971987447560913 -0.924123023995864 0.363246291231829 1.46641502660896 -0.287122333700954 0.142180461461734 0.931331824147031 0.0184397920370414
Rv2218 0 0.98896119661614 -0.212922628702600 -0.534209750390318 1.38773570847574 1.12418915817153 -0.183996108911127 1.14509744136686 0.513809853363555 -1.36912217505592 0.147307993996342 -0.34296986877029 0.835943457546748 -0.0980302677488646 1.70440528635938 -0.492210399810639 -0.196232272374538 -0.522718996942545 0.756242054022101 -0.830056458298589 0.0155707720171700 0.0395650471078132 0.326864953867706 -0.545742198286415 -0.141612808283868 -0.715169679492707 -0.911830359462757 -1.24438274379926 -1.11160362473135 -1.14734918062958 -2.17800831600091 -0.102668562138556 1.35510372460653 -0.348186482578597 -0.125777872245647 -0.97186744554688 -1.19930559907079
Rv2359 -0.311356502531765 1.67197466777634 1.28049211382107 -0.095347245869248 2.73433988024940 1.90973536700004 0.720020851441868 0.925094624290617 3.28660402178544 0.190763259915546 2.61650757034531 1.31110026288097 0.962406856254454 0.298022187601291 1.50707753198041 2.24407741518466 1.24059803099987 -0.496838136797302 -0.388264177062722 -0.687894338181691 0.669364739139988 0.446298903615105 -1.02800516620093 -0.249202030111198 0.380569461838798 -0.434199663029538 -0.71048017002669 1.17699130511528 0.638897349385738 -0.364703723058996 -0.925653365010769 1.27139305148040 1.547132739391 -0.990185498675825 1.06711755568584 0.688392558906085 -0.413166363958568
Rv2365c -0.155326649736343 1.45504141643208 0.325416994815665 -0.640666069125827 2.36850581753461 1.52002635969593 -0.183697274667911 0.60186210090479 2.35050929847337 0.157895848564512 1.23085102055114 0.996166774012651 0.262027823574325 0.200278140304326 0.750216342915025 1.50667653432273 -0.114714664525702 -0.184334798250095 -0.568115718756518 -0.0811453936254757 0 0.261964063617138 -0.603972608680485 -0.300819179809176 0.346693212873023 -0.0974919012943662 -0.484446223882473 1.07744814543552 0.634190937945444 -0.493858159783815 -2.18259929569687 0.535341311550243 0.155441505853379 0.174352073835343 0.327921139559162 0.304956140398767 -0.131602477858791
Rv2551c 0.773093859311413 2.63798190966490 0.835904589435851 -1.14001404769991 0.909212560360777 1.02937868729493 -0.296112956241235 0.157196025617006 2.81090074209883 -1.34544369828809 1.76128219917582 0.543622317999231 -0.301035623103445 -0.50176951601233 0.421794688696500 0.777693132848845 1.30822949416577 0.0826580467266275 -1.04702721572339 0.453030237705317 0.0914613649312976 1.25395305792899 -1.25479052811501 -0.8741142914739 -0.323565858721401 -0.570170293535289 -0.859919917012496 0.127704045403581 1.00936490572665 -0.863050752441917 -1.07494284496477 1.02005362903959 0.946840211501746 -0.629917996487978 0.727593553659287 -0.451682873752358 -1.10561697809619
Rv2558 0.0899544538464973 1.86759998180264 0.537575292118296 -0.5451257531978 2.23742144711111 0.989677773885642 0.182452637784452 0.226650862876017 1.93564141007581 -1.44338440903698 3.39124564389897 0.66577845368085 0.270554428488880 0.198815759346464 0.181422468079838 1.18708600335563 -0.236242879857956 -0.0282482258222022 -0.262589572856624 -0.303429750709896 0.20861433431932 2.36998094843289 -1.25999851419421 -0.997710214549364 0.557552210442497 -0.72265629936943 -0.585668908803607 -0.193181275281581 0.189191244196744 -0.960304313518871 0.207468417975106 1.22641540641536 2.35571931783605 -0.00226572611306725 0.239758619192191 -0.211949071935018 -1.60762635746858
Rv2575 0.603923389346274 0.395874666608963 0.592681857424740 0.101541725252506 1.68666446545147 0.555279433072689 0.538313728446865 0.548687101346689 -0.154504242254501 0.898063455892944 2.85685888084120 -0.128979799219438 0.617259643250806 0.298611142231714 0.57927645535428 1.13648077934472 0.738203746490888 0.227903723936802 -1.50747279615098 -0.9572726732869 0.379718491189641 0.216170524026246 -0.0208544804415035 0.0313533420742051 -0.0922303547122889 -0.520655408825836 -0.76270346421033 1.20213361086067 -0.52086435239743 -0.62338583075127 -2.18353456343551 1.40130192758807 1.02191887335327 0 0.31913442669752 0.261296767018383 0.435150406063734
Rv2653c -0.233821180852360 1.00980508358217 0.168562608578617 0.365495075265233 1.26655559534358 0.573656529298655 -0.393170604741499 0.110899147597491 3.10971961504834 -0.064301529334818 0.474079241415140 -0.217568599921105 0.253693930447840 -0.117769306903424 0.841113279441715 -0.249642509737018 0.55068164918319 -1.48997853203462 -0.09901962981528 0 0.166757392054533 0.979344414375288 -0.931383516419409 -0.164793419295641 -0.447087224158673 0.0528013576223974 0.204125800866493 -0.759276704031903 -0.405172350273014 0.315592933868924 -0.107903509887933 0.783128099943997 0.286352044852428 -0.80564047550188 -0.0813773253157964 -0.0763535179873567 0.529910734060904
Rv3159c 0.257618096076089 1.26310052291449 0.607660996233904 -0.409708593866886 0.384279250737338 2.16271746454094 1.14497855614305 0.92277575882937 1.98660621222243 0.606201111625769 1.64679818397143 0.292425758323084 1.70148298819494 -0.0421832078134474 0.356124745127219 -0.280115431409432 0.260333367770982 -0.309415246514518 -0.929571338138189 0.0772387578001888 -0.392943795204646 2.02187618349773 -0.765461056026536 -0.464761926053008 -0.293600492203064 -0.484156455833534 -0.697049076253848 0.978035094692082 0.176956472908458 -0.422420177385939 -1.46367675148959 2.52001672977915 1.76746692850007 0 0.632294421231307 1.80226561611419 -1.07295438375045
Rv3416 -0.0542340712971488 1.08528702963987 0.559415929598785 -1.88276842718952 0.0256514835319117 1.04585578896631 -0.259204115250424 0.477643942512152 -0.456916064576199 -0.321761041618392 0.887443929417446 2.00459307297213 0.147138222555479 0.303771139400236 0.147069091507262 0.9078935594272 -0.0995094397927943 0.240693874629936 0.0603652410286943 -0.114984326784469 1.04962890685874 1.38739856575629 0 -1.78439338820220 -0.115883924909878 -0.492100465256209 -1.69442554180990 -0.474230297880478 -0.551477367245243 -0.139455147681954 0.642181073732494 -0.0240766426271465 0.289891796028850 -0.162020492075825 0.654375655247489 -0.0160543851503851 -2.52559690547208
Rv3437 -0.341775119010332 1.54107476430075 0.954194661513768 0.167146929989702 2.10537055574440 1.36531316493086 -0.118856434253217 1.85814224665164 0.978268882828526 -0.653767027581567 1.40420872608037 -0.36641675677473 0.499976254994783 0.161592260855567 1.67993789450761 -0.0427546051909111 -0.460768921005922 1.02599912940044 -0.6574508925938 -0.504337203924394 -0.449433006256751 0.27143123637508 0.0693564623523664 0.0571563821133091 0.0447853823729292 0.120705756245323 -0.333595928626245 1.34086893324966 -0.364792074692573 -1.63445664034620 0.321011338685437 1.31725256650576 1.72589855846971 0.180744167850105 0.63711615265972 0.787095312689485 -0.0328956570644699
Rv3755c -0.119888822547401 -1.28733058909827 -0.441493224197138 -0.402492410662578 1.27498749188601 1.56924937655134 0.294536533526513 1.73643638989329 1.25366349250398 -2.69402315239690 1.51603174385453 0.264535351237018 0.84532610908272 0.425918513570807 2.67026004211070 0.910673328306522 0.916159770843165 0.481823669348427 -0.0994102255837768 -0.315912633861036 0.0205805398849226 2.54229056427629 -0.214848685308551 -0.407511237131401 0.228612230952048 -0.669226086791136 -0.585588857252365 0.470703133338087 -0.660441342497506 -0.98832543918152 0.225459202593659 0.375378191492871 1.60105733085423 -0.251754928698924 -0.270150804551485 -0.105108135024666 -1.01218122836519
Rv3757c -0.0450574699127286 1.96518619220533 -0.288852817483922 -0.840160118201659 1.74043345209514 1.88138938480808 0.185728375403105 -0.0632025072683936 2.31485541972564 0.158457192925028 2.57275507331310 0.554563540505579 -0.181825008428401 0.0891284796920944 0.0807923336061396 1.30424836661686 0.421569868674888 0.221362927790051 -0.449137489353178 -1.12240452606948 0.862614876945873 1.24947773403733 -0.762591188923191 -0.600082043673318 -0.303158360726457 0 -0.465414271545872 0.256930163420563 -1.11974270093221 -0.493278606256433 -0.627759070104254 0.427881254090724 2.46770901572828 -0.354579082782636 0.357805672341081 0.237939959472386 -0.522412917541522
[+] Show/hide bicluster #52 motif PSSM #1. bicluster 52 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 1 0 0 0
2 0 0.473684 0 0.526316
3 0 0.684211 0 0.315789
4 0 0.052632 0.842105 0.105263
5 0.105263 0.421053 0.052632 0.421053
6 0 0.947368 0 0.052632
7 0 0 0.947368 0.052632
8 0 0 0.157895 0.842105
9 0 0.421053 0.052632 0.526316
10 0.473684 0 0.421053 0.105263
11 0.421053 0 0.157895 0.421053 [+] Show/hide bicluster #52 motif PSSM #2. bicluster 52 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.1 0 0 0.9
2 0 0 1 0
3 0 0.3 0.7 0
4 1 0 0 0
5 0.9 0 0 0.1
6 0.3 0.4 0.2 0.1
7 0.2 0 0 0.8
8 0.1 0.5 0 0.4
9 0 0 1 0
10 0.7 0 0.3 0 |