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[+] Show/hide bicluster #51 rows and columns.
bicluster 51
Mycobacterium tuberculosis H37Rv
20x35
[+] Show/hide bicluster #51 rows (genes).
bicluster 51 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #51 rows (short gene names).
bicluster 51 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #51 rows (long gene names).
bicluster 51 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #51 rows (NCBI RefSeq gene IDs).
bicluster 51 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
28
[+] Show/hide bicluster #51 gene upstream sequences.
bicluster 51 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #51 columns (arrays; conditions).
bicluster 51 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #51 ratios.
bicluster 51 ratios
Mycobacterium tuberculosis H37Rv
20x35
GENES ARP4 Ascididemin_Natural_product BZA Cephalexin DCCD Deferoxamine Dipyridyl EMB GSNO_CFZ INH KCN Min_med__succinate_ Nam NaN3 Novobiocin PA824 Palmitate pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 PZA Rif Rifp starvation Succinate TLM TRC TRZ UV X_111895 X_241 X5CL_PZA ZnSO4
ORFD0315 -0.0595623551884749 -0.310313929394053 0.0154361801998035 -0.00366737128566737 0.58427414770516 -0.105126046865134 -0.217947029851256 0.0877777727902375 0.246373343434139 0.199964485060376 -0.401235955018336 -0.0280260115101778 -0.235919172873449 0.644526718571382 0.223744229345301 -0.583325837476347 0.00181387291144072 -0.162991120916836 -0.104759074014774 -0.219761764333113 -0.497045444061117 -0.238867423277908 -0.114656881122425 0.171397620300778 0.268008065861591 0.219925487881818 -0.100988847678278 -0.284893056098242 0.0184525682395112 0.370603141204414 0.958498516807042 -0.245064357563463 -0.145802578125027 0.148907333279763 0.228728600074579
ORFD0316 -0.0918300089490714 -0.0404209482628252 -0.164964967031278 0.0403783377617649 -0.00412835005441996 0.0202627711369153 -0.217126648486550 0.0903043903369897 0.889176438583735 0.556848209304177 -0.76581440588784 0.126372040981504 -0.217023086755698 0.0414021806551765 0.0467567160800958 0.0183410896882125 0.206435152668476 -0.22019077218634 -0.224611817932798 -0.375712675818112 -0.470313788788798 -0.189570938705035 0.0728119263909202 -0.611057931666212 0.184089508709817 -0.0154037262941959 -0.086402052233349 0.0434529846869515 -0.174315596115692 -0.096136951253586 0.830701632342317 -0.267454180207177 -0.063386044958917 0 0.371872075072787
Rv0050 0 -0.414303192371373 0.25684020618149 0.395090950602682 0 -0.21844502119157 -0.344391572456568 -0.0959273001594619 0 0.0820718327588615 0 0 0.0683054427752783 0 0 1.00061911938918 0 -0.83985584288517 -0.295797325009263 -0.000164655597824583 0.670509878485818 0.874516184948782 -0.391039606733091 0.286926015203645 -0.296844513514904 -1.24128494167042 0 -0.168113576574952 0.971640838623537 0 0.544663127165291 -0.0622479810709799 0.58454166551831 0.304022716500884 0
Rv0163 0 -0.195390499669602 -0.706223508637175 -0.0831187007189645 0 -0.286368372448805 -0.311275471706494 0.0104385864661706 0 0.121528786057846 0 0 -0.369727679258142 0 0 0.855278271899768 0 0.0689682534869153 -0.328442343439992 -0.623267432007902 0.0219616376105801 0.0595473352312616 0.473607677151774 0.119987320802011 -0.64497156882673 0.166206885885297 0 -0.0677117379864712 -0.0753472497432049 0 0.00941806914488985 -0.453350355122461 0.0548566910703668 -0.225091221219189 0
Rv0382c 0 -0.817214302842008 -0.230088007843714 0.241460987513103 0 -0.476242718918527 -0.351565351336283 0.123470739341096 0 1.04853704178239 0 0 0.336751706845815 0 0 1.40700454110262 0 0.252082250905799 -0.177342644454091 -0.375896308315935 0.906231317476294 0.612885194218726 0.983638822414452 -0.599896098733707 -0.800425838915828 0.596728314284826 0 -0.079917108192654 0.575109006007343 0 -0.100672563620815 -1.03939741558169 -0.0529786393592761 0.957903495045887 0
Rv0605 0 -0.241725324272080 -0.574265106121732 -0.377940901620783 0 -0.401475274956528 -0.0778702668416554 -0.632299482377167 0 -0.229735512073743 0 0 -0.509065613353438 0 0 1.66731450897909 0 -0.815917080764893 -0.957454622188344 -1.00484302203197 0.270267709005186 0.605879669709584 -0.132868774461092 -1.12687555257712 -1.15129911272902 -0.404740532655839 0 -0.500670330827019 -0.465496814829384 0 1.62301611364563 0.130896257691047 -0.19644132067607 -0.414274077975119 0
Rv0609 0 -0.323579760093303 -0.651200281886606 -0.156567806776328 0 -0.495711719600332 -0.261371864090527 0.0614833437327174 0 -0.0799192225252415 0 0 -0.48313332768957 0 0 -0.0730309096337765 0 -0.594494668220506 -0.367801577252812 -0.498176701427669 1.48407822023720 -0.0861489710480637 -0.338370292269232 0.352717019880938 -0.0568403379802723 -0.337166742889981 0 -0.474458296615102 -0.223185573763468 0 -0.364795090358885 -0.386775299652309 0.0778603888308692 -0.187041043923957 0
Rv0669c -0.694831041803355 -0.277027871995195 -0.325751857844415 -0.128509425012848 -0.335442973593016 0.378477382384655 0.122796067547489 0.339804882303563 0.976377196520292 0.0875841359673764 -1.02710146881752 -0.372699145345285 0.0530055299267815 0.49537877472369 -0.57718130079836 -0.499257334060246 -1.21207558158560 -0.291630938999307 -0.285708034607879 -0.214261060656922 -0.153997586484797 0.252027374072949 0.0238489425135317 0.102220852842828 0.290347416661402 -0.771733651040137 -1.22968135334263 0.0494416458325186 -0.216158711501251 -0.0740602290773538 0.354820616471400 -0.404337816316337 0 -0.213802694345850 0.00487990871179143
Rv0829 0.130773496514707 0.00642149262736416 -0.243522930021588 0.674303631034689 0.140507317445320 0.0310105956722057 -0.269116315927544 -0.114624318136577 0.130773496514707 -0.087551843061599 0.130773496514707 0.130773496514707 -0.524016764503909 0.130773496514707 0.130773496514707 0.677686924673572 0.130773496514707 -0.296767035652695 -0.393577458871474 0.0275848455355382 0.43976896988589 0.440968032858056 -0.326283052801611 -0.122129383583473 -0.709320969159044 -0.137453577756646 0.130773496514707 -0.193260823288385 -0.0408550183600077 0.130773496514707 2.06011976881534 0.409406998329314 -0.178012552624088 -0.0189178981495296 0.130773496514707
Rv1446c 0 0.401492047379885 0.558901471997499 0.116483689196796 0 -0.251803538516655 -0.0773748156177981 -0.115921502685557 0 0.119136940612786 0 0 0.351154230493031 0 0 0.0711239582743937 0 -0.280599641393834 -0.0368199357215209 -0.320584709984436 -0.412967159548165 0.123001933750966 0.696832928346134 -1.03348789375661 -1.59153899624895 -0.586104626688278 0 -0.128700018440944 0.311417086568628 0 0.748110746911156 0.203697871152988 -0.134748986487047 0.522020726706291 0
Rv1448c -1.27196127220572 0.181888416935874 0.383033014769226 -0.0728945551504445 -0.0175898985368473 -0.242365616195214 0.129262328429074 0.284780733242593 -0.547383520622602 -0.0898463148941839 -0.419762675467377 -1.31123349120191 -0.0794420598879142 0.377431626088353 -0.115128993136985 0.207335102826854 -0.474970135726643 -0.279959889639004 0.299012628426842 0.421130337894356 -0.0799999353244014 0.222163872277252 0.118869519313605 -0.4481909602995 -1.73041964557391 0.0425045945829629 -0.36668718590165 0.158039598615906 0.446858795169995 0.210994865133724 0.683250064192498 0.229339752712202 0.166178782481180 0.209254587159087 -0.277671851536450
Rv1836c 0 -0.338560457374873 -0.254141872099845 0.80325878305386 0 0.421158968202159 -0.254736139285568 0.716077291032533 0 0.981990369156653 0 0 0.0534899866179688 0 0 0.286450050046034 0 -1.09785629753561 -0.561916518490536 -0.229155777821554 0.472636505675693 0.540118347757452 -0.191845784070809 -0.321732383141661 -0.74724676949922 -0.256224350689493 0 0.498944961900448 -1.09118644758310 0 1.01920114754841 -0.213767819643309 0.755183151893737 0.328842472568992 0
Rv1840c 0 -0.176887943933906 0.230436893681516 -0.167647251384613 0 -0.555774891053569 -0.354006971890803 -0.0995855246021747 0 0.320147050694512 0 0 0.156651008502148 0 0 1.53724487259541 0 0.0777177750270496 -0.290007510496868 -0.795772425239996 0.467924402565257 -0.0173701427122949 0.653967659071565 -1.38060231805753 -1.54339915722004 0.00438207497584263 0 -0.670576057417523 -0.792369571314583 0 0.498186264819994 -0.0915737819704589 -0.198679850818779 -0.0638655197763677 0
Rv2487c -0.105884091377769 -0.0736967599443977 0.113111957933130 -0.145539260440319 -0.0992552713395927 -0.382329534883233 -0.165986488711883 0.24879616591049 -0.118143571867192 0.732028968867238 0 -0.538419850329648 0.274961202750012 0.333625510405211 0.459053110333725 0.387346759656046 0.0948084375009695 -0.107259873370032 -0.98226079728294 -1.31541060721323 0.511449535966094 0.18604946664487 0.769290543710258 -0.71089439937024 -1.22229653436251 -0.737345091950 0.322267112782919 -0.450835701527481 -0.849800091799215 -0.280227979437801 0.440519114774082 -0.0242813649144404 0.022172912974887 0.230618394146391 0.391299630404299
Rv2791c 0 0.0507155210853612 -0.0617787372584201 -0.0109293367978728 0 0.0740563102060782 0.0247215412683986 -0.293259429502014 0 0.812968479547301 0 0 -0.232356605551218 0 0 -0.10587467332901 0 -0.611531361155196 -0.71229307274566 -0.631660360361114 -0.0481964438286148 0.510061209949597 -0.601130837877309 -1.2559104163979 -0.271665992715140 -0.851811360299593 0 -0.000488797993260363 -0.121961445437885 0 1.95892824019807 0.227192320138383 0.253930619059026 0.350914345926232 0
Rv3030 0 0.405247850652202 -0.389138739821625 0.350500524387777 0 0.198325677416798 0.627134613023486 0.134130961563035 0 0.165405738199682 0 0 -0.0659127899942636 0 0 -0.821800197285874 0 -0.893926356446555 -0.491876767335895 -0.176453836801609 -0.552167558244279 0.355607018012465 -0.127976783034720 -0.171154453119083 -1.30222835954049 -0.580838645649697 0 0.67232188863647 -1.11473844758510 0 0.637974581289816 0.18578731558324 -0.311298566621777 -0.639806017284347 0
Rv3115 0 -0.0382754188556486 -0.394797270900687 -0.237810364593723 0 0.104952275196469 -0.49715207788554 0.293740189897288 0 -0.255467895877696 0 0 -0.330590604014402 0 0 1.07265995801806 0 -0.413824629149923 -0.744847963990726 -0.459339962057197 0.864300816830847 0.133043344914111 -0.381042231791449 0.308341638506813 -0.364138416729987 0.73242136021768 0 0.00234025847428794 -0.221840505110423 0 -0.56919518015504 -0.154587863000953 0.281998146239195 -0.20929932372411 0
Rv3137 0 -0.0367194555880415 -0.694966554511154 0.283641986690266 0 0.152984717417021 -0.73588422926812 0.319112186046694 0 0.713485341878346 0 0 -1.00619809773420 0 0 -0.208901613218398 0 -1.48390885831451 -1.52146602782118 -1.30213800298234 -0.614639118637644 0.251252163020044 -0.364184101136331 -0.385095629461666 -0.38058067851031 -1.13515864793195 0 0.0268427029558158 0.0739384441464526 0 0.212976504931421 -0.304344564816659 0.385369249010519 -0.796458188863888 0
Rv3157 0 -0.700058257166545 0.190656167694061 0.584788829445957 0 0.468067485043257 -0.604981751972659 0.116554259283223 0 -0.100217551302088 0 0 0.524630920719964 0 0 0.794348901082181 0 -0.481536354575984 -0.355152400372996 -0.110143619298691 -0.528364086501626 0.668623255555747 0.495890485581698 -0.263447896113775 -0.201408787285613 -0.840247500428748 0 -0.0648966828628902 -1.20902334491037 0 0.360673279256928 -0.642062736850647 0.0507102116659342 1.27667556498935 0
Rv3488 0.414555472650233 0.535779577318186 0.414217100577655 -0.0908942463040106 -0.516169507103405 0.0568643451257789 -0.109069458874581 0.166994879981993 -0.809204120329376 0.855679321795632 -0.0752135111041203 -0.341593294746885 -0.0965231572023795 0.65756226440294 -0.89203309588502 -0.116927954548512 -0.386613109538104 0.365159792024822 -0.227839103581282 0.098821282469512 -0.288007867127882 -0.093647453503224 0.234926985867136 0 -0.304062336837509 0.115672460826365 -0.0350033342850366 0.450073243327661 -0.582075137428223 -0.120786991257805 0.304528443761626 0.252030315682996 -0.164181073706798 0.224899522038869 0.88430247652115
[+] Show/hide bicluster #51 motif PSSM #1. bicluster 51 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.013217 0.022497 0.951069 0.013217
2 0.084645 0.593926 0.022497 0.298931
3 0 0 0.285714 0.714286
4 0 0.214286 0 0.785714
5 0.071429 0 0.928571 0
6 0 0.5 0.5 0
7 0.071429 0.071429 0 0.857143
8 0 0 1 0
9 0 0.214286 0 0.785714
10 0.5 0.071429 0.428571 0
11 0 0.785714 0.214286 0 [+] Show/hide bicluster #51 motif PSSM #2. bicluster 51 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0 0 0.1875 0.8125
2 0 0.125 0.875 0
3 0.125 0.4375 0.375 0.0625
4 0 0.5 0.3125 0.1875
5 0.8125 0 0.1875 0
6 0.125 0.0625 0.375 0.4375
7 0.1875 0.5625 0 0.25
8 0 0.6875 0.0625 0.25
9 0 0 0.9375 0.0625
10 0.0625 0 0.3125 0.625
11 0 0.125 0.125 0.75
12 0 0.0625 0.6875 0.25
13 0 1 0 0
14 0 0.1875 0.8125 0 |