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[+] Show/hide bicluster #46 rows and columns.
bicluster 46
Mycobacterium tuberculosis H37Rv
29x35
[+] Show/hide bicluster #46 rows (genes).
bicluster 46 genes
Mycobacterium tuberculosis H37Rv
29
[+] Show/hide bicluster #46 rows (short gene names).
bicluster 46 short names
Mycobacterium tuberculosis H37Rv
29
short_name
[+] Show/hide bicluster #46 rows (long gene names).
bicluster 46 long names
Mycobacterium tuberculosis H37Rv
29
long_name
[+] Show/hide bicluster #46 rows (NCBI RefSeq gene IDs).
bicluster 46 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
54
[+] Show/hide bicluster #46 gene upstream sequences.
bicluster 46 upstream sequences
Mycobacterium tuberculosis H37Rv
29
upstream
[+] Show/hide bicluster #46 columns (arrays; conditions).
bicluster 46 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #46 ratios.
bicluster 46 ratios
Mycobacterium tuberculosis H37Rv
29x35
GENES Ascididemin_Natural_product Cap CCCP Cephalexin Cerulenin Deferoxamine Dipyridyl DNP DTNB DTT Eta GSNO_CFZ INH Levo Min_med__succinate_ Mtm Nam Nigericin Novobiocin NRP_1 Oflox PA_1 PA824 Palmitate Succinate Tet TLM TRC UV X_111895 X_121940 X_124196 X_241 X_59 X5CL_PZA
Rv0196 0.0680303801692473 0.809508677947761 -1.10447257392370 -0.095520713762331 0.603277360246673 -0.0641273445702236 0 -0.488456441034137 0.0113007429494590 0.204324898832174 -0.484706305873591 -0.637999493913 -0.170297119595772 -0.67593956653729 0.554233402439433 0.348050150259440 1.61447710791616 -1.11197777317580 -0.889891713526413 -0.0654869380612533 -0.00278382713135043 -0.543786554567391 0.85817534173583 -0.892442760688982 -1.71446175228783 0.471249270445635 0.223482496280457 -0.276522738576474 0.332439086418828 -0.241914376751766 0.83385296539858 0.0924573144670449 0.167359343868163 0.291373937562935 2.61451894468044
Rv0197 0.106469217900565 -0.234574456952526 0.152919598110731 -0.287817529402554 0.508279521474647 0.164216975563589 -0.106806576271068 0.98911088747968 -0.180741656253633 0.182010441189180 -0.511675582376124 -0.461143684231625 0.126319456573512 -1.46001145786050 1.09222191466194 -0.305410640626586 1.05301498307434 -0.473203993520226 -0.296937870730807 0.727446753909678 -0.470128758229942 -0.470472132617504 -0.126849518002625 -0.537995566709617 -1.00503930412345 1.31539104283078 -0.0222980219947282 -0.554647148688668 -0.169073940807557 -0.0262836745926046 0.674896890047344 0.0233750883708874 0.00849355009748354 0.0385783662760148 2.14318620677975
Rv0232 0 0.731525679851105 -1.00073138003919 -0.327059300323351 -0.22517920345408 0.944936079472696 0.996125943274268 -0.758593116673246 0.189324499915240 -0.872158168483038 -0.604603008042547 0.823645342100928 -0.96649749399815 0.442029215792215 -1.50785797285507 -0.809704694822616 0.348312903729743 1.48874555992672 -0.462048828422662 -1.10195051717861 0.118623958918398 0.120912191685353 0.168383858179139 -1.03783879653333 -0.818950962900838 -0.178091265419866 -0.123140014534207 0.0563845640283702 -0.817827733762405 1.21679648604497 2.72024974739505 1.09721176094811 -0.493546228826749 0.0626844119348864 0.729462083493118
Rv0450c 0.605126604086715 -1.80397557212551 -0.429150966251399 -0.348983221111086 0.0849733029036752 0.29421148727312 0.999963146097353 0.296001891475147 -0.135189142725435 -0.481494231769672 -0.49529700250883 2.82973548842753 -0.785971088618677 -0.739952609828824 -0.0046587944647042 -0.0425387575701259 0.293836778626972 -0.381360167996016 0.0101080589710635 -1.57632006354795 -0.658474401648826 0.182631766739518 0.0773743459390665 -0.623292215834354 -0.420281376903297 -0.743421200725464 0.409440181285602 0.777289338761579 -0.42818362090239 0.706756860522124 -0.350493570279922 -0.271429405847059 0.374939034663187 0.111815808752077 0.38726682252934
Rv0451c 1.67084188118995 -1.04937894906222 -0.242448709031275 -0.210421009158408 0.773631341490376 0.902753554281889 1.58515116248229 -0.0725382473657172 -0.138943957888672 0.818906079192264 -0.28450433298198 3.02216048044617 -0.393201867492990 -0.633008363060333 0.0735105653194836 0.0101274685273807 0 -0.306067102025964 0.300000067304213 -1.22189298129137 -0.62615194971234 0.501110110061326 -0.849440139790823 -0.8253797137608 -0.727565111985998 -1.51843658677834 0.625390340484237 -0.00521803471460605 -0.269210761654148 1.39327914507537 -0.108942297193489 0.479798011924961 1.20772952478165 0.558148539463066 0.411374058459856
Rv0846c 0.0822614168262016 -0.290591189346761 -1.46953095072568 -0.311830891382484 -0.366024165042461 -0.700608200918611 1.62400081637889 -0.402331304754868 0.223773622968813 -0.856407424378559 -0.305042833129292 0.212668319337695 -0.480442469994748 -0.104680315073917 1.25776849305618 0.194138976619058 0.496226880309126 0.353880072959439 -0.216928737635569 0.764014725471498 0.908172760199879 -0.381160956948310 -0.575424596638743 0.0365016867092606 -0.0300441274661051 0.212668319337695 0.613572117270241 -0.269867781520245 -0.185089040883696 0.606269586693251 0.195280863541902 -0.407674734961382 0.766373665585727 -0.698508616313843 0.956333392275714
Rv1057 1.17658299560829 0.829180499418153 -0.344384610684146 0.366010476025627 0.0302238773493652 -0.457239655737558 -0.246793294177443 0.0348260504717713 -0.57533998931074 1.21840925684121 -0.238486092716762 0.487329193577911 -0.315526322559345 -0.243644444155187 -0.720575290765218 -0.367308345707659 -0.151110448991998 -0.720485429449009 0.63058352454143 0.295700489396049 -0.500749622880878 0.0878384821485738 -0.181748016219841 -0.82322470492068 -1.28721124207327 0.563312958489621 -0.0241468676823051 0.332588757190966 -0.48430005619896 0.209128172486663 0.849423534045974 -0.145432095972645 1.14059822077105 0.96415432608117 0.159826239709737
Rv1245c 0.7638158198156 1.08278941230602 0.121983615710421 0.0982179870576732 -0.765885797933859 0.158533670911952 0.00836058333244844 -0.447175097538232 -0.486268868629676 -0.375958576604116 0.61552583737514 1.18281806834006 0.54361143405523 -0.674697530732483 -0.230446814974113 -0.742303047899102 0.592636180846232 0.537826843663513 -0.56736925683367 0.439821682049205 -0.291530185669653 -0.4006320430232 0.263490711315839 -0.269206812017308 -0.6590573546721 1.8983392931826 0.110486761163098 -0.679713202234735 -0.290980908758799 0.70059419572277 0.201932082379263 -0.0398667126400612 0.0647560628553831 0.00521990417126281 0.999590515143122
Rv1442 0.0180199712338679 0.53878627495984 0.161978556184652 -0.0565444474836835 -0.0426938966753726 -0.536807074798436 0 1.46531113193881 -0.566738337441427 -0.316441040259068 -0.574740549179054 0.45593690162446 -0.66982230263352 -0.369880247001496 0.448853244509416 -0.292182941110016 0.682264023609292 -0.744750068042294 0.0907434697310876 1.45716903127539 -0.340876528217125 -0.206242398974865 0.846247565867696 -0.605068118108588 0.181123871005864 -0.19107344327536 0.0114118737934054 -1.08954615049171 -0.282245866927954 0.654718635177807 1.81749888738803 -0.210457112671637 0.350212192014853 -0.470677646767452 1.46823873655114
Rv1674c 0.439732861482518 0.661709705596601 0.364255435588259 0 0.847225383782651 0.306767930070947 0.63644578192274 0.188408726675352 -0.345844269537129 -0.543420339229157 -0.325353873219946 0.122221861264361 -0.335836381376382 -0.265063224880342 -1.97736151469197 0.365497873448857 -0.142193737374630 0.0753919529649548 -0.226539506505058 -0.6179287755932 -0.381030590091633 0.364721782431582 0.287675761751086 -1.01791695637337 -0.834177894584737 1.01042974736425 -0.31409946006763 -0.236771135776227 -0.315673522372801 0.440614688790334 0.173410344551199 0.255005891508283 0.0500570820395375 -0.152363491825903 0.427779911871999
Rv1681 0.436713773798512 -0.659530378427549 -1.91441453929202 -0.344987145777119 0.61441700959321 0.094139329456341 0 -0.210673306876881 -0.202268702327835 -0.62690810157576 -0.111276270163167 1.18423417941092 -0.19360893485019 -0.0148277144397831 -0.217857257972314 0.000244370490038206 -0.763822962249684 0.525732011078153 -0.983933168587165 -1.28836424923856 0.0669926481027922 0.264575416135710 0.000548460119680074 -0.627933540460313 -0.414573294007172 0.479144780108477 0.141342903441412 -0.852053895177119 -0.238395668217274 0.75669869502925 0.0794999338859367 0.311395052608741 0.285680438955894 0.918173941194438 -0.66005546693011
Rv2016 -0.158469087550540 1.52918665352136 0 0.0498801840002952 0.695351119476692 -0.149471179613204 -0.0818787864642301 0.155727752131795 0.187460464980465 0.264389163894716 -0.865345041940933 -0.0508503477605775 -1.38119712553966 0.763052300902426 -0.950163102393559 0.229854075673049 0.229854075673049 0.00101111748472209 0.239766020394521 1.81295384143374 -0.335357470694871 -0.182776676038516 -0.39248542307876 -0.218751783467178 -0.154696377476013 0.647770938578528 -0.237629150957619 0.737383384428401 0.229854075673049 -0.304955592445986 1.0644457626323 -0.0818071481525735 -0.426543318042345 -0.0181305720264242 0.229854075673049
Rv2017 -0.370950400048757 0.134426535102678 -1.27711531818374 0.440030946940244 1.10328198212778 0.210710243594165 0 -0.128154069101253 -0.148648000280076 -0.790511935641137 -0.250952650866075 -0.652403777526417 -0.49455133967786 0.341248675930356 -1.35595861579878 0.0861841140192457 -8.82314261205311e-05 0.2228411777252 0.588406594555678 1.43501524489244 0.295472668367654 0.160649595091802 -0.313733664442117 -0.74353874343961 -0.149970216319306 -1.08267738990296 -0.00729011192900775 0.281148953251712 -0.343657125016942 -0.080977018184159 -0.110803000140978 0.346860097047573 0.204354532024952 0.0125881791443267 -0.0310070750351641
Rv2379c 2.10163795438588 0.311027289565706 -1.40927268024475 -0.289787088343906 0.178022684717266 1.21837882434314 2.38109050746317 -0.291994751720107 -0.19358244786724 -0.379343514012494 0 2.47267599276100 -0.0568216048655064 -0.0352945739031898 -0.85707649623912 -0.309924745225773 0.0812300117518934 -0.190342049716768 -0.0138829187151808 -0.328664612320071 0.00615164218417322 -0.129800848176723 0.779197553776704 -0.887204957246023 -1.27597828842731 -0.614274780183368 0.045613773201227 -0.0577897386317562 -0.179651530038992 2.00927916863243 0.708113559331444 0.235375864407694 -0.0573163535761587 0.467305480428604 0.277021875502587
Rv2380c 2.64003246773641 -0.836889038250954 -0.696524322859681 -0.180567084320295 0.168237439779108 1.48094548758807 2.74225836492266 -0.00966175046807595 -0.291258249880195 0.182733081412641 0.0267398933110777 2.76833776769907 0.0181116279061187 -0.276832544914972 -1.69385202487340 -0.0213069075426852 -0.0315753403511675 -0.0632702334046925 0.328552214693574 -0.263848188950021 -0.169066018639232 0.213166780624636 0.553456107484022 -0.826010292382634 -0.78354972991268 0.244788005811165 -0.0328205610989361 0.0600682444472248 -0.00252510787399640 2.15805159175885 1.13626215841392 0.416618450082171 -0.103223988691150 -0.122960568126974 0.309324650727510
Rv2381c 2.27015664161563 -0.355412037819485 -0.408732420177526 -0.0887241732831568 0.0930385001492311 1.38293534649341 2.55092249489980 -0.080761808977782 -0.09622977761894 -0.0159828312697451 0.167447264155529 2.98622227930073 0.05663537413034 -0.0230627566844685 -0.451603234187733 -0.173133315153536 0.00859703109993252 -0.241375337024165 0.357129004473325 -0.293114086196598 -0.0149202801863312 0.218262738051673 -0.199984884929697 -0.717942739412445 -0.858764564984535 -0.464458170843732 0.185544272239072 0.364882723420289 -0.111982873968852 2.04115845319352 0.985819512848653 0.444125423341142 0.359924021262220 -0.000175173535055831 0.262265209223436
Rv2386c 1.65126968385239 -0.537353682485784 -0.471930043470208 -0.448031930770879 -0.157625588338371 1.06675124807203 0.13687643189304 0.141309528567299 -0.739075577486016 0.0830890001290269 -0.676252652561905 2.19018200557677 -1.04243263069904 -0.0963209895715438 -0.0729430632401668 0.536231316782223 0.479302691030946 -1.00151244464672 -0.00774779413974493 0.409061559059823 -0.253386037568952 0.308008807001664 -1.14672007356930 -1.01899374711218 -1.18249949427393 -0.449206845374341 0 0.45360267028739 0.231891826192229 1.52771215875236 0.940967123966438 0.46516884130404 -0.214970702176194 -0.35746794649328 0.244010310140032
Rv2619c -0.373561084793896 -0.377503579663856 1.62320120161009 -0.259118166293038 -0.356807180151269 -0.364854300765036 -0.106790693518966 1.45458401672218 -0.324829214119669 0.859810056994518 -0.694812659796546 0.287104606055536 -0.960377953952655 0.00129222576347887 0.227177995257254 0.172983489954652 0.284614063608678 -0.835568961613108 0.571468015071364 0.415108656340298 -0.20181520792167 0.198121453724639 0.349336992188744 -0.389162862808206 -0.511433324900064 -0.568758995318073 0 0.559413213089733 -0.0858147573380047 0.0974015940845012 -0.386855568348567 0.109553210484549 -0.265770004825576 -0.270628594906206 0.105086934606764
Rv2620c -0.237052946154275 0.03287563490141 0.947234286059248 0.00406181031994234 -0.162178367548532 -0.354102922551712 -0.132233042847982 1.09467834247038 -0.169961935464085 0.804914647419439 -1.31718452868354 0.75321781670535 -1.00470286712823 -0.218661244158601 0.616315652134264 0.289022047650672 -0.0710481987698695 -0.371960192984985 0.334619465781 0.162708196610610 -0.245993940039097 0.358652669863241 0.329374994616293 -0.0885023412829575 -0.675176724334847 -0.663421370230752 -0.0480767238908038 0.579909428994732 0.41220658039812 0.322392542206011 0.196407460430378 -0.0354142011977188 0.228131713776653 -0.503510253014388 -0.089164715712135
Rv2621c -0.00307878529814428 -0.0317460639844567 0.561789676474026 -0.0300136668222758 0.47201755401453 0.173463024042543 0.254391750479545 0.588574343124815 -0.169638161162169 0.766800365836684 -0.099848027247095 2.10728408045192 -0.337586584736002 -0.223318295266425 -0.664159325530546 -0.220357252399411 0.245527169074025 -0.297617721469915 0.606528441120528 0.460297491038749 -0.477561524802026 -0.140567394433294 1.30878269133271 -0.364646153392138 -0.517890511927745 -0.0235910269994485 0.110078340765886 0.489492331439103 -0.456709571397577 0.0757373643616645 -0.323074025892439 -0.302293286140156 0.612288020239598 0.694281932291101 0.267837851725348
Rv2677c 0.104895288077136 -1.12401951260073 0.308688785428342 -0.0236647354782083 -0.287846792392716 -0.179917214912565 -0.0132282078999373 -0.67322376296977 0.271267097812608 0.453656821319885 0.194288198892759 0.0990008011105452 0.419951880178550 -0.274754985427414 -0.979136693387432 -0.300324559847582 0.046853494368943 0.207464666623254 -0.678277727615387 -0.0627844796336976 0.169642405316012 -0.210267330061545 0.809133524463602 -0.436144285472108 -0.403676594000031 -0.782417198226397 -0.00832470591371425 0.654381354670804 -0.278826041167423 -0.281552811931182 0 -0.220604173803676 0.0206729849251836 0.197624827358956 0.195882255602469
Rv2794c 0.240583405218866 -0.729798832745908 -0.229698732636122 0 -0.245532386850874 -0.0164096755183260 -0.01100981116947 -1.58692104120497 -0.552494777737348 0.511290094760901 0.557442700555941 0.92069856618912 0.96960426110024 -0.50371047962239 -0.0861467799252678 1.32723635563546 1.70795602900462 -0.487689300900872 -0.253240921356352 0.561648256269366 0.0348852190719566 0.602509334188349 0.288892291236441 -1.56612745535111 -1.30652786962534 -1.13327702547793 0.424852115559325 0.500184426252124 1.30447329153838 0.671622299156603 0.139338167738729 1.03175820840020 -0.112677607802975 -0.0677548765393447 1.4842089730868
Rv3084 0.826933924911882 -0.77603571935246 -0.919143932139056 -0.354119508965057 0.0843551558088499 0.710095790738033 1.38549151946491 -0.438556017056058 -0.278605430383461 0.108212464866695 -0.0739538757948346 0.271668993617721 -0.149191701262367 -0.304983283694347 0.153111071526602 -0.0623271476679972 1.52866225892465 -0.544977219543801 -0.587140721728004 -0.583092985023663 0.0401746254138289 0.108324044346351 -0.194067568525517 -0.201389475696635 -0.263606013344698 0.625448535323371 -0.292886782753745 -0.269929561385031 0.0984663297297737 1.12257022299775 0.095101093829372 0.582306595477958 -0.177115405645279 0.0397971785632552 1.52718722479797
Rv3085 0.650159622242614 0.728351569229129 0.342734070572879 -0.0435780685545468 -0.0161162405072709 0.509006608700596 0.733517599447175 -0.661597164881531 -0.367643859120342 0.317929821093748 0.0320205002773451 0.788712597719475 0.212713637589228 -0.428855622896378 1.16626842922796 -0.967045299752592 0.482343642823183 -0.688022700733237 -0.890810324482435 -0.109091353331513 -0.319204530218223 -0.133974488748409 0.0145402426503693 -0.377049342221203 -0.156619660426147 1.06309424285965 -0.123626989684267 -0.546746088243973 -0.140560040960797 1.08421427479223 0.539637100784599 0.546453940168504 0 -0.0466482850631219 0.79424643709281
Rv3088 1.19252908668954 -0.513446408117389 -0.354742483758087 -0.0840729686517517 -0.133033785254539 0.532309848784738 0.88516012964069 0.733928836192003 -0.694161879352797 0.0493739959738196 -0.330064882998965 0.254108099455979 -0.47376580393477 -0.097233098182542 -0.209821924519041 0.018453738699695 1.13286082902325 -0.602825235231618 -1.11867602920727 -0.57928520079241 0 0.413155855364083 -0.19175969177893 -0.600998778024095 -0.595809276980098 -1.29069656167237 -0.062654677776919 1.05807634578490 -0.222289459195544 1.52289648547429 0.268466807201434 0.331822953561894 -0.631326571124237 0.0279893531818268 0.768319638155715
Rv3407 0.46411989670759 -0.937177737002083 0.281620991559156 0.227619165176278 0.457392926494015 0.429908627236703 0.175612392879669 0.284577035041148 -0.101522243123157 0.0531849431751751 0.8732316071583 0.366396370210143 1.09910470604909 -0.400773439382931 -1.58262423833278 -0.597819171274176 1.12364033309859 -0.659463370919579 -0.369925637241426 0.11038422385667 -0.232023587210624 0.856169070567778 -0.364594457475321 -0.199107747114684 0.118763633110422 -1.43380467601875 0 -0.00190472201003540 -1.49017015448183 0.243986607754234 -0.245003419472813 0.775684054117917 0.0363530150878515 0.373750399035901 2.75955918342062
Rv3730c 0.284856797514337 0.17058255147875 -0.518028650041824 -0.219275857591715 0.355045501377996 -0.0730424286923523 0.0199446717417595 -0.65046486492162 0.593128933365475 -0.393255938072091 0.0246150367446866 0.0627153885576945 0.0550510465473457 -0.192570414499661 -0.403437398786349 0.122420357027100 -0.516715343128875 0.284436027540603 -1.23505990799785 -1.01021575254152 0.239440170552053 0.310025661350495 0.480169539560979 -0.669641818131266 -0.831800655278582 -0.375421378096866 0.0740830533944588 -0.84760723229407 0 0.440786012299199 0.0599998151708932 0.0436517422547878 0.256199556393476 1.20092172502575 -0.806261131582198
Rv3862c 0.642868948580408 0.355340969894933 -0.329653445995290 0.592201891306709 0.735903884843043 -0.242848773150677 -0.0245874665103049 -0.60028429868112 -0.576844592284855 -0.556331224769178 0.399617451938169 0.176259890484675 0.811650895078682 -0.219019139577342 -0.406870488124011 0.0504026495141373 0.0431511297314678 -0.0549912247066591 -0.138665535935042 0.108876062909318 0.786871054393447 0.515238177186382 -0.169435034867886 -1.12252033953115 -1.415407751958 0.176259890484675 0.466916075897663 0.272251112373596 -0.434622644983357 0.250595899603038 0.438752549388313 0.0494342785019109 -0.508523675688537 0.593617211069278 -0.33515739663285
Rv3879c 0.646177331262088 -0.267305219356387 0.730404640588302 -0.12837939922388 0.213976426853154 -0.141429606264790 0 0.309755586444831 -0.505670310320603 0.42638172511655 -0.0903269166889434 1.57016893170184 -0.241969168710962 -0.958334269454976 -0.0797874638903856 -0.718740938882486 -0.652898416835995 0.655801460331248 0.113398939231890 -1.01909304861182 -0.917974560675572 0.295451906274373 1.36640608098622 -0.955176372387728 -0.362774139739221 -1.34167989828260 -0.0290727173275177 0.336990454390634 -0.264696527973864 0.835982600844335 0.536703326768325 0.0669942147371306 1.08852965047013 0.768572937204306 -0.0672516536460153
[+] Show/hide bicluster #46 motif PSSM #1. bicluster 46 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0 0 1
2 0.777778 0 0.222222 0
3 0.222222 0.333333 0.111111 0.333333
4 0.666667 0 0.222222 0.111111
5 0 0.555556 0 0.444444
6 0.111111 0 0 0.888889
7 0 0.111111 0.111111 0.777778
8 0.888889 0 0 0.111111
9 0.222222 0.555556 0.222222 0
10 0 0.222222 0 0.777778
11 0.222222 0 0.555556 0.222222
12 0 0.111111 0.888889 0
13 0.222222 0.444444 0 0.333333
14 0.111111 0 0.111111 0.777778
15 0.242763 0.035015 0.146126 0.576096 [+] Show/hide bicluster #46 motif PSSM #2. bicluster 46 motif PSSM #2 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0.8 0 0.2
2 0 0 1 0
3 0.6 0 0.4 0
4 0.2 0 0 0.8
5 0 0 1 0
6 0 1 0 0
7 0 0 0.2 0.8
8 0 0.2 0.8 0
9 0.2 0 0.8 0
10 0.4 0.6 0 0
11 0 1 0 0
12 0.2 0 0.8 0
13 1 0 0 0
14 0.8 0.2 0 0
15 0 0.6 0.2 0.2
16 0 0.4 0 0.6
17 0 0.2 0.8 0
18 0.2 0 0.8 0
19 0.2 0 0 0.8 |