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[+] Show/hide bicluster #43 rows and columns.
bicluster 43
Mycobacterium tuberculosis H37Rv
18x39
[+] Show/hide bicluster #43 rows (genes).
bicluster 43 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #43 rows (short gene names).
bicluster 43 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #43 rows (long gene names).
bicluster 43 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #43 rows (NCBI RefSeq gene IDs).
bicluster 43 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
32
[+] Show/hide bicluster #43 gene upstream sequences.
bicluster 43 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #43 columns (arrays; conditions).
bicluster 43 arrays
Mycobacterium tuberculosis H37Rv
39
[+] Show/hide bicluster #43 ratios.
bicluster 43 ratios
Mycobacterium tuberculosis H37Rv
18x39
GENES Antimycin ARP4 Ascididemin_Natural_product BZA CCCP Cephalexin Cerulenin Clotrimazole DCCD Deferoxamine DNP DTNB DTT Econazole EMB Eta GSNO H2O2 INH methoxatin Nam Nigericin NRP_1 pH4_8 pH5_2 pH5_6 Procept_6776 PZA Rif Rifp Succinate TLM TRC TRZ Verapamil X_111891 X_59 X5CL_PZA ZnSO4
ORF08307 0.0124309838789108 0.0595499964018381 -0.158795251580704 -0.756856827916896 -1.42094897946377 0.204193911996002 1.19349204723143 0.452989688460094 -0.945569120175224 0.338249875130957 -2.15943972736775 -0.179809051814537 -0.415008728231735 0.602240176825861 0.409162820681093 0.443224886656587 0 -0.154915003639435 0.409473402596629 0.375977442738895 -0.514779956221745 -0.0147082334041835 0.274558410883465 -0.314197100502316 -0.173910358163307 -0.197578967961284 -0.554648855564028 -0.599505189557004 -0.708958843382613 0.410655017963493 0.523109512207671 0.243588516605279 -1.70021934861212 -0.749364532369039 -0.201978336089400 0.294325448031285 0.290383271970703 -0.817373645588442 0.394216492478974
Rv0640 -0.300216098753128 -1.76516280263253 0.0438888862529895 -1.72067506943009 -1.15229052260188 -0.183476203208653 0.341613794463457 -0.37539431727447 -1.82065308187148 0 -1.85314275838984 0.330878736471273 0.113978223786677 -0.168660064372402 0.40375545842413 0.342465208524312 0.183262943333853 -1.25765279068651 0.540153000990985 0.033048718551557 -1.09114011714208 0.122709336180135 0.0234521684062935 -1.09005942170399 -0.83484987597588 -0.479147830515825 -0.637037793627518 -1.12471561484447 -1.07175223377770 -1.15105509252641 -0.187087498089787 0.244160644554361 -2.02551654508383 -0.982819918918851 0.118499603368938 0.44265088696833 0.206766686012149 -0.854730775476919 -0.394304853727824
Rv0714 0.145648252573478 -1.16230750738633 -0.302745978415407 -0.65727294968669 -1.80578083467571 0.205555542052729 0.525017070683436 -0.228960544559121 -2.52915377392861 0.43339626776627 -2.12070142149908 0.296758305496644 -0.841782080323305 -0.220878331995223 0.163100831996532 0.144443561201993 0.308976299521394 -0.231686616284190 0.366969152684197 0.344438257079132 -0.360545638807374 0.776730613668024 0.130548879188836 -0.00669360577523927 0.178410500215912 0.203769369748234 -1.02948370154247 -0.273865607771972 -0.751113254798628 -0.438951961704226 0.235942903565105 0.0810293821501817 -1.02189914309329 -1.56194703804337 0.318381892738909 0.310922255754509 0.197059361329997 -0.449050508873917 0.216001228936500
Rv1409 0.125207916130182 -0.112955994191693 0.361990540139474 -1.08919882340987 -2.21973965043329 0.7330341624398 0.970706850354507 0.877288095213974 -2.42330208639480 0.701739410501793 -0.618875681171175 0.363067150481417 -0.833444937500049 0.638027319127983 0.248585549330187 0.759499560175295 0.39060271192941 -1.62204804222046 0.862205252199033 0.942255165901145 -0.901053285413603 0.977993202790488 0.438392547772885 -0.652487194538886 -0.7937036011749 -0.46269029630459 -0.118817167251616 -0.94632203076567 -1.10360748759831 -1.07135351166880 1.20683448263294 0.284328616155096 -1.14537425368546 -0.682489595292338 0 0.128938437820987 0.554199142740324 -0.512567027355964 0.0479818437021424
Rv2021c 0.590539975973644 -0.362696732421293 0.308650887720443 -0.353417246984294 -1.05263179505014 -0.268321449430605 0.477450828789842 -0.275970259635606 -1.60577772040678 0.113764740811994 -1.80983725518452 0.194984437991917 0.341133208886014 0 0.241156687100301 0.784397004524487 0.177541123383821 -0.678059325546094 0.831508361478155 0.0104164327144691 -0.990432667686713 0.315428803594901 0.377098261497136 -0.559194384291562 -0.370679186505167 -0.0655635977774321 -1.57025855147249 -0.508353072225019 -0.397226478700883 0.152337568350393 -0.0222941915413453 0.225233925367726 -0.0202597405687519 -0.68314132699161 0.175779182179703 -0.0681836505653781 -0.358411125465319 -1.05820937899893 1.71358896705925
Rv2127 0.153451201917741 0.0147903895823071 0.0815191031043283 -0.278564551879649 -1.40316111112322 0.197248052941835 0.0647598364349797 0.544260494762386 -1.43151821473457 0.6048753105245 -1.43369002374054 0.457372898377954 0.437107100943617 0.284441673486052 0.907992623350564 -0.109780067818118 -0.182191193054915 0.154973125650649 0.0430264396867246 -0.22705206296921 0.22946365107872 -0.553467616648064 -0.171124447417164 -0.554914895312687 -0.398795756235647 0.0514432441599756 -0.539905833013690 -0.371520347353802 0.669772415528424 -0.999287316442606 -0.151384830427322 0.091044868702773 -1.08761245876452 -0.646640570883246 0.785423101997883 0.328699798039854 1.37200910644957 -0.138210149518617 0.974637774117092
Rv2128 0.0900334063818917 -0.348241836015438 0.0230467304829132 -1.04510914628112 -2.73248830516822 0.0207827269177237 0.670590196248125 0.601826246226465 -2.43234068242678 0.557489341011288 -2.13043156608371 0.986675978002247 -0.236663691958096 0.730450143164297 0.114732760710374 0.199570702736826 0.681513296365211 -0.735160670235792 0.294843115838389 0.64015113068663 -1.06027312380782 0.96407678872327 0.200703721331264 -0.88993121913657 -0.285416021744439 -0.512546329541833 -0.320391950003508 -0.770805939812455 -0.693265585495237 -1.44600683502643 0.284443390265138 0.0922413390874707 -1.23978042311709 -1.75804745349797 1.36697910983327 0.805488402660414 0.233527452129998 -1.29338222210739 1.23593096177752
Rv2404c 0.469877768316339 -1.26115655309994 -0.270633230427025 -1.19551708464416 -1.93559662901935 -0.0340326588888773 0.369042422413804 0.942761900224385 -1.93118191437628 0.703332695022646 -1.56463742520521 0.0352192143527158 -0.754803690949839 0.969969711750878 -0.318641565987191 0.100260742280670 0.939212168612262 0.0902355411122825 0.118237988697751 0.943898544884988 -0.516599944061261 0.100469063687173 0.365791635955713 0.095772128163208 0.106954821744645 0.564010925354755 -0.725174498568634 -0.358601388499038 -0.121026986958507 0.0913431423733073 0.683740898478598 -0.0315971640970248 -1.09664649857602 -0.773975501791375 0.315531879598077 0.601433322238191 -0.0109216916425423 -0.0317989591176811 1.51672881081199
Rv2534c -0.000878279316805747 -0.293305629506532 0.803294156750413 -1.24737221828713 -1.75927187401219 0.282579613565809 0.302384600922848 -0.0821370657367614 -1.31898311577896 -0.0279817160135082 -1.77955768616186 0.346380973005075 -0.68066351099795 -0.0636082808608553 0.446921035019997 0.438914812301919 -0.213768806076452 -0.95805750968137 0.176329624860974 -0.309014317050534 -0.337783151987445 0.130006246284854 0.840250072290701 -0.205153723286196 -0.415374054766088 -0.269210338106537 -0.100282327376286 -0.0120336859216706 -1.37046076500280 -1.45404238085607 0.186683545175097 0.603674658473344 -2.20140822451866 -0.84063298734148 1.01746475140026 9.65224274627847e-05 0.615847294454803 -0.0215366441044331 0.0203930760884296
Rv2903c 0 -0.359612339277506 0.0465940426716023 -1.04253308321760 -1.84351388831803 0.0374817273386077 0.0367250153081467 0.175506121618215 -1.06926248057937 -0.124246087654525 -1.8399272559852 0.0850198510554608 -0.0535504616873654 0.436741790596081 0.114172363750395 0.411927305727423 -0.129480685320455 -0.726090127785835 0.369491975598734 0.287071021032923 -1.05015209730821 0.815909023871396 0.148335947163827 -1.51073651309586 -1.05761300197288 -0.934668342288096 -0.567406606829296 -1.05256745378591 -0.227141318934447 0.0279176927124959 0.265016929316841 -0.313799141329623 -1.48379221363474 -1.55022317231303 0.613818737335849 0.283533032273267 0.655012893946323 -1.01472552284334 0.236692201434566
Rv2909c 0.33655140952028 -0.66969907973023 0.115628978777996 -0.00984144634659782 -1.84062581754807 0.331961605694580 0.810441900912231 -0.149219601616548 -2.02124250491652 0.317349814244511 -2.32071980395478 0.28490683535272 -0.624661954820196 -0.254104204998121 0.378635654154129 0.508569392774472 0.256830733604772 0.364880515034453 0.90538397092206 0.214136726682966 -0.0598922606317965 0.494529395717681 -0.0434592621799239 -0.383048648373695 -0.429287182500102 0.0366238238545845 -0.743985596256198 -0.0719373908929935 -0.0962446072125629 0.201180025606040 0.302495058726839 0.478365455727415 -0.93922286808203 -1.04621189060194 0.0432887637516365 0.250803058825277 0 -0.0986549215475025 -0.0314215721556812
Rv2916c -0.116610653403724 -0.414808363846796 0.197436446961725 -0.676971887622553 -0.235869123752203 -0.341058277048243 0.456173356820647 0 -0.669046037341181 -0.173116770638851 -2.10969148689481 0.219953140050852 0.112623855630479 -0.0113533427914125 -0.0748402942594047 0.526297961624233 0.565762577813166 -0.860120780956115 0.442547856046278 0.335064227304466 -0.832535827922552 0.548827929240653 0.79127726306784 -1.01676572440718 -0.552756062090353 -0.743101036624871 -0.416889024371637 0.117176107624011 -0.93299426124443 -1.54604701919366 -0.372361599102244 0.168911663372623 -0.0403404026788447 0.245916609276701 -0.0633982697362649 -0.0211052588028872 0.203294898096535 -0.308036570125699 0.300554581546264
Rv3319 0.566285295592362 -0.447323992518557 -0.207695026625470 -0.192149325698240 -1.87107279352719 -0.118853439184222 0.507743996166109 0.662578219310293 -1.67563908031099 0.149606205884785 -1.98322724259837 0.390809012003172 -0.934231114601396 0.519194426513336 0.674616912959082 0.395522532857257 0.330860540549377 0 0.311886919346175 0.410591462381585 -0.478974020132475 0.457832178684722 -1.25645617671026 -0.103709912445062 0.123314445438079 0.262087090381600 -0.251516996605597 0.0241252424114323 -0.146573491412769 -0.626853952108605 0.186480489044136 0.396628468897877 -0.702092508834879 -1.10407012824910 0.258420204641809 0.194327254715302 0.484329197480868 -0.344801878335667 1.06881861119157
Rv3363c 0.403948515782137 0.410154626037894 -0.160052044545213 -0.659644494848917 -1.57389897383148 0.372529231142902 0.502839208831795 0.107911918076292 -2.14112588904172 0.585387989496861 -1.72244487932753 0.414074345472522 -0.727791456156623 -0.0704350928383459 0.187089321875826 0.280836703193031 0.727122788799437 -0.471841355586544 0.738238899496653 0.619571145390459 -0.915922532441883 1.23717767724014 0.895948224101929 -0.432163437305054 -0.417756815436567 -0.0940097957854764 -1.66943732639071 -0.652503917720143 -0.577975457125202 0.265853045156881 0.340216602136048 0.145004498253803 -0.777631981887206 -0.718078121414976 0.311806049559419 0.288681083107390 0.471525758126111 -0.447725882257072 0.917901072662606
Rv3686c 0.242598553118653 -0.953248603471526 0.104885861935759 -0.911254009956263 -1.70084949980861 0.0899909413416673 0.283107505491734 -0.0862746191623526 -2.58111372406668 0.417655798743649 -2.54326022665336 0.368712216323537 -0.641353969412494 0.127908103643809 0.568051829457077 0.665955410602418 0.235590918910369 -0.319167853100784 0.78067059200334 0.341271411324836 -0.853184476586679 0.472889017973786 0.128142685871408 0.0429694576264531 -0.00700420941340509 0.285743806743725 -1.29940147287628 -0.383577998787127 -0.0991590239595862 -0.0906225544229005 0.587568454979127 0.144561998076922 -1.05932896958298 -1.49362944278205 0.847729517442378 0 0.246817371178998 -0.866482320431842 0.318697516631707
Rv3715c 0.200693132002241 -0.534115174975886 -0.166034490969514 -0.424171701466793 -0.476116626834165 0.851643951417395 0.528180199660795 -0.0234181473932491 -2.19352717296196 0.322776958158454 -1.41545387745442 0.777611652155052 -0.871269895064879 0.0284525075824823 0.398202053283571 0.717619441131903 0.140512548541003 -0.649508373240174 1.11437737825278 0.076223677809531 -0.688291672862417 0.0363606674866801 0.325829468317453 -0.289206262443271 -0.142448632204396 0 -0.425699690178488 -0.529493092867181 0.221804209321692 -0.656124936361095 0.192699205445713 0.310513573654368 -0.66470722406738 -0.581412825898742 0.215965426386781 0.161104417433152 0.715014112340594 -0.899278144574123 0.433534165002699
Rv3716c -0.305128876878429 -0.132924526608594 -0.466586998492414 -0.699868490001121 -0.295938135100634 0.424227495154356 0.525577207213773 -0.0311932902706811 -2.82464190949181 0.429396557333121 -1.53558586651964 0.821298568937613 0.12012360815493 -0.245379967870241 0.333545198223578 0.58922101867313 0.438799496101689 -0.357486644099753 0.594716068465153 0.526705584828107 -0.585412428430001 0.72927892820565 0.446881818895536 0.128255579813027 0 0.235407448921866 -0.110694530524524 -0.391572925836183 -0.064900532885101 -0.176897915489812 0.505905936486797 0.430914879414461 -0.613256854269608 -0.419458110050989 0.274074090116716 0.0888642607567221 0.153814480692869 -0.593847837393421 0.152995831156036
Rv3923c -0.0707210959449757 -0.486914400187469 0.171457366765282 -0.190678711702516 -1.16118900147931 -0.0380620715230839 0.290961679733361 0.110091061194975 -1.68640699074624 0.0241734075955479 -3.52451315460039 -0.0699220654208101 -0.398614527281015 -0.603375039271019 0.176515587279412 0.143073410066515 0.0595320028965117 -0.127014386420824 0.502128914207513 0.475315290510456 -0.266849115140732 0.312667347778832 0.481410828513016 -0.470989546549875 -0.353970109364328 -0.56469300702415 -0.664013129872688 -0.107959831482656 0.197322773392200 -0.300057336890905 -0.393701625702593 0.0825416471181853 -0.352592779548041 -0.816609699540888 -0.0905131248108752 0.0867366081428437 0.881523565910259 -0.508486979158099 -0.118749276649402
[+] Show/hide bicluster #43 motif PSSM #1. bicluster 43 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.066667 0.2 0.2 0.533333
2 0.066667 0.466667 0.466667 0
3 0.066667 0.066667 0.866667 0
4 0.266667 0.4 0.066667 0.266667
5 0.133333 0.466667 0.333333 0.066667
6 0.4 0.066667 0.466667 0.066667
7 0.133333 0.466667 0 0.4
8 0 0.266667 0.733333 0
9 0.333333 0.466667 0.2 0
10 0 0.2 0 0.8
11 0.066667 0.066667 0.533333 0.333333
12 0 0 0.333333 0.666667
13 0 0.066667 0 0.933333
14 0 1 0 0
15 0 0 1 0
16 0.133333 0.666667 0.2 0
17 0 0.6 0.333333 0.066667
18 0 0.066667 0.933333 0
19 0 0.466667 0.266667 0.266667
20 0.133333 0.2 0.333333 0.333333
21 0.066667 0.133333 0.8 0 [+] Show/hide bicluster #43 motif PSSM #2. bicluster 43 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0.777778 0.111111 0.111111
2 0 0 0.777778 0.222222
3 0.222222 0 0.777778 0
4 0 0.555556 0 0.444444
5 0.222222 0 0.777778 0
6 0 0.777778 0.111111 0.111111
7 0 0.111111 0.222222 0.666667
8 0 0.111111 0.888889 0
9 0 0 0.888889 0.111111
10 0 0.888889 0 0.111111
11 0 0 0.555556 0.444444
12 0.555556 0 0.222222 0.222222
13 0 0.666667 0.111111 0.222222
14 0.111111 0.222222 0.444444 0.222222
15 0.111111 0.666667 0 0.222222
16 0 0 0 1
17 0 0 1 0
18 0.666667 0 0.333333 0
19 0.333333 0.333333 0 0.333333
20 0.111111 0.555556 0 0.333333 |