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[+] Show/hide bicluster #42 rows and columns.
bicluster 42
Mycobacterium tuberculosis H37Rv
24x38
[+] Show/hide bicluster #42 rows (genes).
bicluster 42 genes
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #42 rows (short gene names).
bicluster 42 short names
Mycobacterium tuberculosis H37Rv
24
short_name
[+] Show/hide bicluster #42 rows (long gene names).
bicluster 42 long names
Mycobacterium tuberculosis H37Rv
24
long_name
[+] Show/hide bicluster #42 rows (NCBI RefSeq gene IDs).
bicluster 42 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
46
[+] Show/hide bicluster #42 gene upstream sequences.
bicluster 42 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #42 columns (arrays; conditions).
bicluster 42 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #42 ratios.
bicluster 42 ratios
Mycobacterium tuberculosis H37Rv
24x38
GENES Amikacin ARP4 Ascididemin_Natural_product Cap Clofazimine Clotrimazole CPZ Deferoxamine Dipyridyl Econazole GSNO_CFZ GSNO_CPZ GSNO_KCN H2O2 Levo menadione Mtm NRP_1 Oflox PA_1 PA_21 pH5_2 pH5_6 Procept_6778 Rif Rifp Rox SM Succinate Tet TLM UV Verapamil X_109 X_111895 X_124196 X_241 X_59
ORF08429 -1.83074153459131 -1.75098563173042 -0.096292121662968 -2.01478394670605 0.041351336772871 0.446248902208988 1.20957661912074 0.112723652578654 -0.00344860708909455 0.160449195614304 1.22292822992134 0.991074297886042 -0.391435239118642 -0.165215066852110 -0.939674845443218 -0.924816135371864 -0.296524370929689 -3.23181992609795 -1.43279821893686 0.28530541369272 0.818553041817746 0.710000986804298 0.132315856547904 0.211254080112515 -0.957697088446973 -0.602155685375962 -2.31858141608785 -0.857653726896039 -0.509625757196556 -2.57590394778988 0 -0.0303991593703883 0.484135155132983 0.28737631093631 0.301210569874979 0.662874827635469 0.660944054563374 -0.470424426144508
Rv0272c -0.70116446974316 -0.446980322689761 0.144149468630402 -2.15124684620839 1.33407559038963 0.123671903216182 0.454660773225087 -0.182205440493754 0.388259597442264 0.0512989537478362 1.07334179255424 0.785668517610773 0.402141217487206 0.557339917341712 -0.563244802190852 -0.998171568518681 0.283510045902971 -1.20955222470552 -0.739360988221927 0.0141471064236512 -0.24253431384355 0.591799527983672 0.648425430138118 -0.138825989059624 1.05020260139218 -0.719909964320474 -2.54299241653179 -1.42349286544486 -0.499716732449457 -0.474990416820437 -0.987591083954684 -0.742532296616367 0 -0.19476249471112 0.756763391689399 0.0556580899755975 -0.042963904450823 -0.244527508541374
Rv0273c -1.81808234489338 -0.868771095320071 -0.181166789163372 -1.04439424356608 0.151655360630004 0.0320240672464026 0.527916850823411 0.0311299047590924 0.228442954400143 0.152045223102887 1.47468246742996 0.404214002733826 0.524201144047346 -0.994555943145557 -0.220175686420319 -1.55695507394492 -0.734577921699394 -0.81505507591988 -0.555610050405823 -0.505564023846697 -0.372758803296123 0.250690494766527 -0.0366147659310091 -0.0434462833438872 -0.508618998323612 -0.117583745942259 -1.38761497543220 -1.01955471607210 0.141681371585412 -2.59181837606103 -0.168443639809055 -0.814350120529652 -0.267034940207920 -0.527860255311365 0.0205510764887929 0.115933724454513 -0.34257377573399 -1.07287564260312
Rv0556 -2.35832370676761 -1.55781372315719 -0.137338522431531 -2.30389859436004 0.655647200051331 0.6038966872247 0.774482372921999 0.286582674281457 -0.34120085430828 0.658473831928462 0.288791623314643 0.491132443550205 -0.205875390447049 -0.357719121329621 0.0134725837724381 -1.59784324880002 0.583118011355589 -1.43243896432738 -0.312045456286488 0.389067859148734 0.361350545172337 -0.348713762577884 -0.0982492496531567 0.100279424342225 -1.38165470214026 -1.08156332635755 -1.61610839328852 -0.7622811506781 0.0401256608889398 -4.00575447119973 -0.00194804363819448 0.866239407966402 0.190914199445009 -0.0116766037114677 -0.157063887150792 0.493141743003168 0.00940957011314628 0.146855310984657
Rv0557 0.150281116875942 -1.26089140121197 0.0946371868028358 -1.08711830658637 1.31834635936009 0.387880436983916 0.0296600186471796 -0.291167728559665 0.00106966715160839 0.837595173127393 -0.0988952368125945 0.520991456119406 -0.188114267410308 -0.370685926480932 0.136831960145146 0.353676882546591 -0.675536808180903 -0.1885711344394 0.129520304166355 0.192783036210098 -0.00108580075662015 -0.285656641499417 -1.01185776756531 0.879946259920526 -0.148152452740185 0.4414584471079 -0.0617743303723225 -1.05189800171657 -0.157907207462039 -0.718561227027785 -0.154119476768324 -0.446846709640691 0.887235978819926 -0.378469724265636 0.159511822431073 -0.206395936129180 -0.197687627941325 0.0387315493348708
Rv1107c -0.385537631240219 -1.37917462868928 0.430062219893561 -1.25876167167532 0.828071400139606 0.720859981597547 0.498411701846752 -0.0277905900761922 0.521588818664851 0.536287246895217 0.680330962616214 0.298625144424438 -0.134456496051618 0.127622311105841 -0.0432381834060055 -0.717510103139907 -0.0053175826067847 -1.6352381982903 0.234072432975263 0.576763969920533 0.384790731616444 1.01013972749206 0.509035848610459 1.19647738910814 0.260134948120495 1.54154498832208 -1.42245112658483 -0.386961080603055 -0.213005462089225 -0.537812018676786 0.330445947071467 -0.59020129071524 -0.639956960769232 0.744275357070085 0.681393699951241 0.600818788160739 0.420420025661918 0.920696874750985
Rv1181 -0.742648922181706 -1.06672648999862 0.194319570808225 -0.0569157795105956 0.982061417997542 1.06275482057045 0.570228028933427 -0.0822941731273114 0.582790098974408 1.01415449239656 1.28587549785215 0.579839366378357 0.719546055779543 -0.495629575077614 -0.0480486380766305 -1.34815834214779 -0.246228338210271 -1.11653918643668 -0.673257983163901 0.352631433279393 0.182414659310854 0.16344851941989 1.33708719723314 -0.506368743020195 0 -0.659809476897263 -1.07754115447354 -1.12795285271843 -0.245043565752500 -1.85561372015057 0.798622642947722 -0.606069909678337 0.758271276295355 -0.149065730760833 1.09475413002219 0.614664604877385 0.228650993129843 0.177325511152791
Rv1183 -0.808174398769442 -1.42121566613344 0.177781421452556 -0.552611189741018 0.446994377476917 1.00169334038077 0.835856137766398 0.0366523158393815 0.396741600946606 0.81142453785313 0.231613188574543 1.0755974976765 0.301742083232544 -0.770455712664527 -0.0452267467470482 -2.15718375729126 -0.285583564424758 -2.00392799841841 -0.808214884572251 0.152584264073943 0.092609659099972 0.855407155759788 0.957278538466474 0.0310958492384368 -0.265693418757163 -0.0455639075968739 -0.617585715504939 -1.20932060031318 -0.213187983256488 -1.52548540561993 0.972461088893273 -0.612334925283224 0.670226223379244 -0.448263622075224 0.733432376471512 0.332188754907401 -0.34776656281444 0.0686461120897542
Rv1184c -1.59863716978164 -1.80570146320563 0.973562992816004 -1.13807017635030 0.594169388109887 0.26477367231567 1.42794277500745 0 0.758329975283717 0.275369292300038 1.63450070039326 1.86838581770421 0.253503620471711 -0.721349524318237 0.357560275424012 -0.819428069316246 -0.327280431806261 0.02477695951376 -0.436472184479539 0.144923373574110 -0.0260052276106557 1.09652957427906 0.187561995190875 -0.47226382102197 -0.645658779721114 -1.19011218563600 -1.08242564022721 -1.47838225584265 -0.0429589500406745 -1.32390816568857 0.491579795195709 -0.762818036622059 0.933631932473774 -0.094621159119908 1.24662391068855 0.393931347125419 0.311155761043801 -0.00863215914010781
Rv1200 -1.82369986630166 -0.780875883877602 0.892264486768759 -1.6790678419904 0.295851503249997 -0.30907307105845 1.27758388816056 -0.0662456019138683 -0.0405194020724879 0.0700519474767725 0.837537858018553 1.48629679331082 0.113051444448369 0.120345558793905 -0.092496800446464 -0.720530255494391 0 0.696480077832497 -0.45653785517361 0.287936276945757 -0.40494287365679 0.638900752944598 0.268135684341417 0.15105644221834 0.470187089136763 0.683000023872821 -1.91569771973453 -1.25840008251847 0.0847800803038394 -2.16035242388687 -0.337460350695844 -0.125498635611056 0.792676288025105 0.248796135241685 1.55111457531596 0.42234516408569 0.348896310749241 -0.46780712516981
Rv1217c -0.656564428834503 0.435610021260527 0.218086577745995 -1.34386570499808 0.699342835473805 0.144086202735068 0.66091802567838 -0.682054561097899 -0.28900444083213 0.186908329946919 0.0149380795556226 0.845459843613442 0.0074973838553757 0.0022532030914905 -0.652923769530164 -0.315646339241696 -0.439516656311289 -0.702916132506225 -0.494048554782513 0.231484765155945 0.199577370891483 0.418275782560136 0.161898872098039 0.57104501031674 0.0856920471132543 -0.935560367246177 -1.72475728704609 -0.145041953784161 -0.76975147182205 -1.94712327089003 0.986140901455233 -0.0824729922223284 0.777188058948467 0.128952014178422 0.451584913065768 -0.331593469726215 0.400967196208314 -0.17945478045358
Rv1410c -2.076888624878 -0.402407158682585 0.884905132995273 -2.01922138430931 2.16852288465673 0.863041723927974 1.77081136087138 -0.196996533498304 0.135262351499615 1.29293284103315 0.723306023304603 1.99059172516479 -0.181550010804112 -0.26294375647913 0.398153466261708 0.241231190192349 -0.277333335967511 -0.593101883022706 -0.0652065962820796 0.754901332067809 0.0677386719173166 -0.315297396033607 -0.328714480336779 0.45257090883884 -0.465159112242823 -1.05896158981257 -1.90156169027980 -0.82424867858847 0.572532495080905 -2.11912570399113 0.093904516165606 -0.409795161341501 0.638601115715452 0 0.873796785533967 0.322291529821568 0.293534503977729 0.836225702519113
Rv1522c -1.77802593116604 -0.56843181560192 -0.73693568470983 -1.42661156134497 0.489090048162257 0.767056796867823 0.502461979270624 0.0129404282704267 -0.793771399803723 1.15212975771522 2.05866430931599 0.931699440824054 -0.177769421870291 0.112237590302854 -0.000696487336238584 -0.307613356624013 0.441570784621682 -0.554547439864074 -1.24388384422766 0.316318952667235 -0.167035581176778 0.955527313949064 0.5338295940356 0.21416081916221 -1.61992520494765 -0.446898839592634 -1.94829519047308 -0.142571639613375 0.00218065971929767 -3.04971966110164 0.946434399419566 -0.0588359829138815 0.298691079262345 0.167879584350748 -0.512229489804075 -0.444878411257216 0.526596033774629 -0.045448182094398
Rv2159c -0.240997911237001 -0.848392049521831 0.0339262304898543 -1.75505035618112 -0.374057328957351 -0.227149821438460 -0.0662856056551452 -0.752454582765675 0.0385876076673132 -0.5074628890598 0.65448945391277 0.289329239720183 0.0972201096316647 -0.874234081558482 -0.208551009138157 -0.763009395876144 -1.17324027137126 0.433807978073932 0.203863399198573 -0.554939075407568 0.135285129125665 0.44580507211433 0.268624604902337 0.0707079049574613 1.96731536766656 -0.49137750011587 -2.56896833211279 -0.31203223533826 0.376669297614999 -1.30505050078011 0.253814611151470 -1.08932163270090 0.202148256133645 0 0.139402886235293 -0.57510680109969 0.265976112021044 -0.279608042869460
Rv2160c -1.63563772807043 -0.110642131636279 0.147094643526749 -1.66661292721611 0.758501106087145 0.372124245464225 0.282645111852746 -0.664462206978596 0.246689255921938 0.605026878501722 1.30842413288227 0.0381691517981019 0.872080821347953 -1.00480143778196 -0.856715729173576 -0.3389489763932 -1.12133172732608 0.59989088707595 -1.29096725577994 -1.03641292645375 -0.47989159777276 1.80248000979985 1.11555976552066 -0.223347931862974 -0.93515787304773 0 -1.67461211900979 -0.843556015937613 -0.071057091211333 -0.264349157930634 -0.264179142552661 -0.96209829564041 -0.452143394514792 -0.650777464031678 0.303904015719405 -1.00181478364149 -0.466217242227896 -0.42445868742587
Rv2163c -1.33674764801817 -1.02191054998640 -0.00937801856247801 -2.05939370983919 0.605222115055009 0.204518740736933 1.24051644768557 -0.111287288886802 0.405206970820068 0.122583738659891 0.266934493192226 0.985338854245462 0.718942413368526 -0.541474053815457 -0.666376409335035 -1.07632495479234 -0.516297251635952 -2.17558294916220 -0.6500245278245 -0.521795783195432 -0.0114201770992251 -0.298332933074440 -0.168295697590509 0.171416825280401 0.475156042972246 -0.266050021982239 -2.54549069599452 -0.806826483042604 0.437983984209221 -1.98260336294772 0.296927100531821 -0.401726374406281 0.0875475647208515 0.545816881646517 0.174304794604368 -0.577767459518601 0.985276733899301 0.941471983002165
Rv2218 -2.75370476599051 0.98896119661614 -0.212922628702600 -1.71658918744034 1.12418915817153 -0.183996108911127 1.14509744136686 0.175248124102340 -0.65459579550615 0.835943457546748 -0.0980302677488646 1.70440528635938 -0.492210399810639 -0.522718996942545 -0.830056458298589 0.0155707720171700 0.326864953867706 0.787967113068708 -0.715169679492707 0.0395431902651102 -0.0210667284567636 0.884407410904992 0.148519856678972 0.0141223839389459 -1.24438274379926 -1.11160362473135 -1.74749795463760 -1.14734918062958 0.223334658144526 -2.17800831600091 0.0862092736711006 -0.348186482578597 1.06360971111051 -0.769470079964693 -0.125777872245647 0.0635475246659299 -0.97186744554688 -0.815331260883143
Rv2409c -0.902103312426282 0.140005508876517 -0.0475428045413685 -1.99983205506189 0 -0.154847458041909 1.26773169806119 -0.315453317138427 -0.080059332707001 0.109658742650473 0.9807779420981 1.14213230410530 -0.895935977304937 0.507214780095556 -0.667730353463291 -0.192237842639676 0.468120173560418 -0.606464839765171 0.0607834342594746 0.680943316444598 0.290406466359909 1.80682290406704 1.66697795394285 0.0061533675730592 1.56323502782314 0.251554545655227 -1.95318906982165 -0.404198230687592 -0.827599874436075 -1.12118953066924 0.728480756358577 -1.03694251948894 0.0997714865572093 0.566618153045077 0.386284674101008 0.857725120585105 0.981574137291003 0.185805142077160
Rv2483c -1.21966371523573 -1.04874514618911 -0.0643558202112414 -1.67000880165673 2.22753970011422 1.12240285559274 0.857819465083714 -0.256404624957273 -0.0570105925393855 0.79176159381355 1.41671876400281 1.88565684618097 0.0292153437828582 -0.218026159240995 0.0193901069459873 -0.136896640826949 -0.0212296061446141 0.230262155689783 -0.232914358620172 -0.478020601955886 -0.575756992672842 0.571663367551667 0.575041184684861 -0.560937322561947 -0.314135624966148 0.0866168417463682 -2.36491832812395 -0.644569543321409 0.375311304740846 -0.660699803521885 -0.391068430951764 -0.113743474998912 0.242955529389705 -0.631855517047653 0.44802773656675 -0.160182602404112 0.0606242205802325 -0.198653220085204
Rv2933 -1.16301465407313 -1.10058876892331 0.847022143186712 -1.13851323388177 0.438113443986819 -0.313609654833147 0.55778528509982 0.178568419872616 1.40965558396978 -0.275693660759595 0 0.0128099396787511 -0.363099712601775 0.112449358314282 -0.640573373081106 -1.616917889202 -0.0673316450273945 -1.55628806991056 -1.07961222496062 0.217486296852314 0.275727567278481 -0.838423821293754 -0.573889277859653 0.6249478159974 0.0424069273156414 -0.354535110974666 -1.41933438996961 -1.33953193213353 -0.315492860505537 -1.81850532198893 0.792972152682183 -0.254161145432550 -0.582082131727544 0.382545462199580 0.798487122056973 0.506071707123264 0.542872245058547 0.396566020015013
Rv2994 -1.81237296803705 0 0.710944811392282 -0.651310805882784 0 -0.0286146137008356 0.901897820202537 0.237643951019145 -0.0185977314713815 0.0178321732432879 0 0 0 -0.572642062460793 0.523524598412362 0 -0.261297511821581 0 -0.102733767363246 -0.111151717721649 -0.209735302648828 1.60799633689280 1.76801754870834 -0.331462394117194 -0.305220907066193 -0.391418972352659 -1.52949493972436 -0.367350518679652 0 -2.32415907634522 -0.375009032921845 -0.494669587148791 0 0.287816490804329 0.694033034402433 -0.128373765062943 0.239695512114155 0.181170994006378
Rv3487c -1.58342685888238 -1.6925085980961 0.537054188234248 -0.724431091193901 0.355694595426646 0.181516340096673 0.283751566009315 0.266769666266119 0.553096069055177 0.161710358665367 0.806223724182647 0.205425369581778 -1.03580431944564 -0.585607948574289 -0.162652200603690 -1.28347220505088 -0.252938595629346 -0.558314545166102 -0.61301177540871 0.192893819532036 0.102526571000991 0.431920293292892 0.512882704479692 -0.36621321276353 -0.99603124585689 0.225864731595333 -1.41073074873251 -1.17638517874163 0.183276383939485 -1.54690527573577 0.269484580245470 -0.0923689626039282 0.484369321335485 0.391745595084637 0.59727471094696 -0.0304119482563999 0.330681638103246 0.580849770041973
Rv3577 -0.742471474185601 -0.498097743013028 0.274290384725877 -1.50923879120292 0.582280806051457 0.464542910115611 1.39938816661521 -0.256510232212559 0.384627015358719 0.775280423539043 0.446424470436557 0.86068356824689 -0.429542581554943 1.19352309183985 -0.368821199717168 -0.338045745530313 -0.176715550237912 -0.593768413951654 -0.033659777148585 0.207644462275973 -0.160483455401900 0.842539715664704 0.614132416565868 0.606460988719377 0.62332642865136 0.541672787471272 -1.75658052749901 -0.63756983977954 -0.683178707006485 -0.30227661908214 0.246967615868663 0.117314750326826 -0.296450190555348 0.422415730501125 0.718141597529896 0.369736698068791 0.0920127618758831 0.915578954799799
Rv3824c -1.36101162558108 -0.702497137129185 0.780724672461577 -0.866997196599506 0.23269268995115 -0.00614717717023616 0.691733564047738 0.0265771869955636 1.09572386842089 0.0255764713526189 0.962881600929902 1.34305236129656 0.221093920569822 -0.491222360770455 0.0355944272459079 -0.640339023762357 0.133318399641258 -2.15600782349638 -0.714266477481477 0.207512519579599 0.161052258031257 1.27130768561059 1.36266643177174 -0.693387978878851 0.0960826567803928 0.35990678895075 -1.00764421374549 -1.21431310219697 -0.204285454196783 -1.87371568537153 1.54627784595447 -0.635705750985422 0.919984059433429 -0.121235980916585 0.988652288579666 -0.0286030988513104 0.099269689170743 0.0341880725770105
[+] Show/hide bicluster #42 motif PSSM #1. bicluster 42 motif PSSM #1 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0 0 0.9 0.1
2 0.2 0.2 0.5 0.1
3 0.1 0.7 0 0.2
4 0 0.1 0.8 0.1
5 0 0.7 0 0.3
6 0 0 0 1
7 0 0 1 0
8 0 0.6 0.4 0
9 0.1 0.4 0.4 0.1
10 0 0 0.9 0.1
11 0.2 0.1 0.2 0.5
12 0.3 0.5 0 0.2
13 0 0.6 0.4 0
14 0 0.3 0.3 0.4
15 0 0 0 1
16 0 0.6 0.1 0.3
17 0.1 0.3 0.6 0
18 0.8 0.2 0 0
19 0 0.7 0.3 0
20 0.3 0.1 0.5 0.1
21 0.4 0.2 0 0.4
22 0.1 0.9 0 0
23 0 0 0.8 0.2 [+] Show/hide bicluster #42 motif PSSM #2. bicluster 42 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0.75 0.125 0 0.125
2 0 0.875 0 0.125
3 0.125 0 0.625 0.25
4 0.875 0 0 0.125
5 0.125 0.75 0 0.125
6 0.125 0.125 0.75 0
7 0.875 0 0 0.125
8 0 0 0.625 0.375
9 0.25 0.375 0.125 0.25
10 0.25 0 0 0.75
11 0.375 0 0.5 0.125
12 0 0 0.75 0.25
13 0 0.75 0 0.25
14 0 0.75 0.25 0
15 0.375 0 0.625 0
16 0 1 0 0
17 0.25 0.125 0.25 0.375
18 0 0.75 0 0.25
19 0.75 0 0 0.25
20 0.625 0 0.25 0.125
21 0 0.25 0.5 0.25
22 0.5 0.375 0.125 0
23 0 0.875 0.125 0 |