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[+] Show/hide bicluster #40 rows and columns.
bicluster 40
Mycobacterium tuberculosis H37Rv
18x39
[+] Show/hide bicluster #40 rows (genes).
bicluster 40 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #40 rows (short gene names).
bicluster 40 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #40 rows (long gene names).
bicluster 40 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #40 rows (NCBI RefSeq gene IDs).
bicluster 40 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
16
[+] Show/hide bicluster #40 gene upstream sequences.
bicluster 40 upstream sequences
Mycobacterium tuberculosis H37Rv
10
upstream
[+] Show/hide bicluster #40 columns (arrays; conditions).
bicluster 40 arrays
Mycobacterium tuberculosis H37Rv
39
[+] Show/hide bicluster #40 ratios.
bicluster 40 ratios
Mycobacterium tuberculosis H37Rv
18x39
GENES Ascididemin_Natural_product BZA Cerulenin Clotrimazole CPZ Deferoxamine Dipyridyl DNP GSNO GSNO_CFZ GSNO_menadione menadione Min_med__succinate_ Mtm Nam NaN3 Nigericin Novobiocin Oflox PA_1 PA_21 Palmitate pH4_8 pH5_2 pH5_6 Procept_6778 PZA Rifp SM Succinate TLM TRZ Valinomycin Verapamil X_109 X_111891 X_111895 X_121940 X_124196
ORF00796 -0.572306364993108 1.36525030605356 -0.231394580588829 -0.4008858821148 0.578721165482722 -0.426882710792527 -0.664332224085509 0 0.500051340390156 0.0735897326269896 -0.124761145874619 -0.32426177799747 0.177358558303833 -0.389302994648718 1.28221201738882 0.9976200243493 -0.929533349247986 0.102639402022282 -0.77677819177411 -0.935132925046626 -0.900308810373665 -0.241382275876358 1.85576166495494 0.337950240009393 0.333630208605687 0.405040567254941 0.78318818094158 0.0961964657575148 -0.316631130834366 -0.575648933561546 -0.0302017357051982 -0.364588597675725 1.84024872789202 0.335505960522599 -0.452074787088081 -0.369036043891569 -0.727520357300859 0.377941322116069 -0.248484806185234
ORF00917 0.670459542392864 -0.602143396063016 -0.370026264109511 -0.276449273296216 0.276027292418996 -0.215816472866623 -0.680991593736192 0.798573072293999 -0.868392736011915 -0.147544007130967 -0.554458711643204 -0.641994881767611 0.392085823617267 -0.382524877084197 0.076043842457436 0.152783047058628 0.608936463523614 -0.0637531647201542 -0.564711579018731 -0.576716460160944 -0.360214822908783 -0.175982458928132 0.163046177033610 -0.778053720883129 -1.23648550516319 0.367224818496924 0.346670070844117 -1.25716834137495 -0.49059911297947 -0.590216826630331 -0.437895066027998 1.57304003411971 0.297389327622467 -0.63240271241042 0.399437999382506 -0.537486612113377 -0.0700796299219355 1.65473471377099 -0.632761348114595
ORF01217 0.0146497900294304 0.190131508076862 -0.120233659090998 -0.252009315800059 1.36266112496710 -1.11725689297676 0.0878823229516726 1.1904464777084 -0.0870547200816464 1.79708813902951 1.58188317971086 0.435791706640968 0.289474557515343 0.172467025253991 0.401743030260296 0.561171363787849 -0.808569700505593 0 -1.42273132450829 0.0526605869515841 -0.203277593751603 0.0829919928560116 0.240692603192226 0.585024776588784 0.208079776780587 0.172649495080528 0.0506419228902677 0.897855593171918 -1.52097246389390 -0.866718628336075 -0.792364801560458 1.18096680301640 1.56561077193723 -0.241603328858272 -0.0708744443658981 -0.717284944855017 -0.415700355043713 -0.00744520106477053 -0.865740657247361
ORF01824 -0.45527401658116 0.0390029122244186 -0.170044685729613 -0.501337259299893 0.224842632389106 -0.398983132538756 -1.02816065725801 -0.102275950172100 0.834847058411681 0.117999654290780 1.29949395937375 1.15552058299399 -0.102275950172100 -0.523892558356595 -0.09078072389532 0.632757729148845 0.888611089345831 -0.102275950172100 -0.469132559383446 -0.85545208277626 -0.849690971238655 -0.102275950172100 2.12284756374746 0.908869824019149 0.255575618499016 0.256658805349189 -0.00646711061147325 -3.19539398000521 -1.28249594340292 -0.102275950172100 -0.0549509980425412 -0.102275950172100 0.789443328588686 1.18338353657693 0 -0.784097555842387 -0.408834829670424 0.70221999302407 -0.217430429192155
ORF06096 -0.131931596933828 -0.144249433340111 -0.235251900056952 -0.565474494697868 -0.447266548865325 -0.898152689370426 -1.00917137586857 1.06750466362241 0.451830554768025 -0.548812833641866 -0.408868281024526 -0.561875454879071 0 0.477012971284032 0.0278465231530822 0.224676336217643 -0.534058096680007 0.661702571300088 -0.391801611794211 0.121651484816369 -0.693430633119952 -0.445843403642141 0.285010128043205 0.367013612047609 0.451351072308185 -0.196463759649622 0.0811581376970857 0.428122447733178 -0.92230171407309 0.0647335415846578 -0.543721207330474 0.289241230463845 1.86871875723249 -0.776482218018691 -1.02000589021493 -1.42187989151803 -0.437007053563404 -1.55604494520729 -1.31453129201531
ORF07004 0.801965706527774 0.802376166664853 -0.742179246824238 -0.842639076739494 -0.118503317280130 -0.617453492687003 0.991541861301868 0.885194352319669 -0.0256687071507418 2.97869200604332 0.0528213419135716 -0.853514682448434 -0.0260501691197173 0.425371498833719 0.796813572809216 0.327767965454962 0.79760528196429 0.272977214888444 -0.863806779449245 -0.134919836132725 -0.239886348798089 -0.398640178952539 1.02146351032529 0.490093737512946 0.928083162085184 -1.04947048139991 0.728778649109819 -1.03124278337935 -1.30881932160091 -0.143830113789939 -0.931585596788703 0.196722169242052 2.53149376840993 -0.603006064787512 -0.127382156466112 -0.66315022343278 1.02436524829884 0 0.236074034734354
ORF08429 -0.096292121662968 1.30236206319334 -0.714021688358656 0.446248902208988 1.20957661912074 0.112723652578654 -0.00344860708909455 0.808709253548197 0.186334075188969 1.22292822992134 -0.537984137692823 -0.924816135371864 -2.66342988427077 -0.296524370929689 0.284363670305446 -0.110741442489923 -0.146663492794004 -0.305657303116080 -1.43279821893686 0.28530541369272 0.818553041817746 -0.853031321919003 1.36695258374425 0.710000986804298 0.132315856547904 0.211254080112515 0.22174448908895 -0.602155685375962 -0.857653726896039 -0.509625757196556 0 0.395455615490063 2.15802280939773 0.484135155132983 0.28737631093631 0.0619666911430566 0.301210569874979 0.375073288696482 0.662874827635469
ORFD0398 -1.23874586565548 0.463122467238376 -0.636417422503636 -0.0229265330037042 -0.35274208413477 0.382202011471686 -0.444626557445003 3.31218626385145 0.703540619770036 -1.19224762296296 -0.96618344896214 -0.92969101812152 -0.00759814199690773 -0.153894558087277 0.776833925417454 -1.64743101862514 -0.350754957321331 0.961140919642153 -0.386567131186818 -0.205433632215466 0.035892590570052 1.57990253992081 0.886483492443527 0.499566980966317 0.523979733726598 0.0467132911930768 0.544558504556716 0.02260544254136 0 1.09079930816396 -0.575505950601604 -0.0709400498126708 -0.538908799331702 1.38124032305370 0.345109444655501 0.295725723374757 -0.913700244700067 -0.234588014570448 -0.310366621774014
Rv0118c -0.0646798037184868 -0.28769949813861 0.281512652557339 0.48489877183439 0.452080160049623 -0.237034098017838 0.529520087736731 0 0.699844417133334 0.929984092356006 1.09988803619581 0.830468888182195 0 -0.0326342190954561 -0.644069341771702 0 -1.12383945380434 0 -0.797450378676614 2.09346686961162 1.01460579728764 0 0.57788001381759 0.715709855805628 0.837237401720975 -2.44906590304028 -1.20364576345066 -0.345467748593127 -0.835646727403821 0 -1.06278894463511 0 0.367734983260188 0.887847278494183 0.440237759472457 -0.169638565103922 0.842715049621807 -0.94166774686085 -0.452393219522362
Rv0578c 0.465047898049577 0.896743833185918 -1.32848102368442 0.343651107037976 0.275309694971714 -0.710697989478729 -0.074231720807751 -0.561399887430448 -0.742037957175377 0.858691203003624 -1.65839642833857 -0.95896417368154 1.70094135774632 0.181538544152792 1.36080247367845 0.496481455419554 -1.03048183726476 -0.327888274108212 -0.533832021046727 -0.50042576249556 -0.0733928091355408 0.67386294712801 1.12506928846025 0.453500929347982 -0.865807861867667 1.0231776641002 1.90446714412156 -1.52107472621231 -0.0412320987845736 -0.316812335858172 -1.07718456671347 -0.388876144887071 1.15127166514448 -1.44719686568606 0.68958095100543 -0.806054087178473 0.329265342003529 1.51431732509912 -0.0613228959555252
Rv0755c -0.258934499252182 0.562659518290194 -0.178493084912632 -0.0428819827838432 1.71925407954437 -0.354662991569935 -0.266378390956036 0.158351380310034 -0.040345091864251 2.46563674839438 -0.591531431568953 -0.0561720791658381 0.227618032041315 1.07971090517133 0.901707628398541 0.233535134691966 0.00819873014309956 -1.42585500308563 -0.472647707518479 0 0.358707468985355 0.113125810336021 0.862332838018463 0.359613168830343 0.752801219042297 -1.04155084371291 0.617330793370463 -0.823505866415692 -0.486479910644189 0.0842636752629169 -0.0328355319223468 1.31439395209571 -0.569389578314484 1.64322542145277 1.71733843650059 -0.0639160276713794 -0.0423681856140262 -0.625362428901241 0.318059939046153
Rv0996 -1.26263333892928 0.518168980081011 -0.17119296040739 -1.15758947157671 -0.0880032568360058 -0.673087394093787 -0.98077478173876 0 1.87543348928625 0 -0.355619846834055 0.633191163009142 0 -0.300341710014594 1.10477928784675 0 1.55118465078223 0 -0.335154524842058 -0.852827461025952 -0.45841848289166 0 0.346619073928039 -0.0834631304954827 -0.744910547581596 0.0529123892653745 1.51310223069932 -1.54752968973231 -0.525060745227461 0 -0.54366556848669 0 0.438588190151248 1.76155065584912 0.202065490018791 -0.893490206281446 -1.57175023683287 -0.635710041125516 -1.02802238613593
Rv2187 -0.427407451231623 0.827024662373584 -0.438040719155308 0.145241935492860 -0.105770994824145 -0.558862782500116 -0.0555339452582177 2.52370494979526 0.148055498131281 0.0197927075892894 -1.03264404366082 -0.672771499039967 -0.732521107315757 -0.307755644197504 0.401398894173926 0.62410356470606 0.850826206770822 1.05359408572905 -0.160264136343247 -1.61294746363761 -1.22157075376545 -0.117807335636201 0.796419398515469 0.175720000587268 0.661356708746506 -0.0782776397936615 0.880023613279149 -0.650389479736955 0.820495517048685 -0.613475177074993 0.486369079771064 0.818759068709564 -0.581520750702749 -0.641945637673784 0.269453590991341 -0.89144559209575 0.0378615491211535 -0.154632599281877 -1.15404354914376
Rv2332 -0.121962351979463 0.851018915584792 -0.122585143330652 -0.291753080925126 0.519397543910722 -0.302846726585572 -0.0439389064632205 -0.276810607302000 0 0.75060038746483 0.239909159675288 1.13710762623494 0.230365723723411 0.186134521899723 1.06736988165024 -0.878681816262414 0.293849472144558 0.81300449114573 -0.0278011153297827 -0.307915029162408 -0.231277663932229 -0.175539499008373 2.70925626606742 1.98306307346169 1.24128785827396 -0.34702505596949 1.92761201611128 0.384043950566532 -0.183630327887419 -0.516933771140618 -0.218370900063935 0.598407318864161 1.13952342437547 -0.158731010572894 -0.360237583858338 -0.351813529645365 0.0744293609161307 2.5621552399878 -0.00616944630009662
Rv2351c -0.451929476914949 0.614816541532036 0.107261775220451 -0.325314797653235 -1.18751977386020 0.461546421648564 0.100132995096528 1.87635131417917 0.623184534644323 -0.00440276821217072 -1.94548345882856 -1.73509182268899 -1.86235960759656 -0.47370452819187 -0.00104402260284024 -0.446668053683776 0.635322760743129 1.51338060207445 0.320841943912096 0.758977742466768 0.588385419908609 1.52217906105223 0.336604620691299 0.49951769552197 0.241427843685006 -0.333976928238973 -0.0612898309322396 -0.281550116812264 -0.933577242318197 1.54978979589533 -0.140823562970663 0.751379927459025 -1.52054374485879 0.968186180422553 -0.0735627103615989 0.228027128309063 -0.689978668568124 -0.414720723870552 -0.67800581738369
Rv2729c 0.886219644238924 -0.643722469908397 0.142523570333046 0.344593468605936 -0.421288425404402 -0.261080810051477 0.36165068965948 -0.104359976879887 -0.742483348763416 0.145206679810220 -0.149876468644672 0.113794941740154 -1.87771962037724 -0.66087572262407 -0.573643988800594 1.05723169945211 -0.628582113488411 -2.00048682345149 -1.15565371359104 0 0.0177957348938648 -0.094735163511852 0.656184549278422 0.521010725530096 -0.0145209504887558 0.0225816829629362 0.208134585596286 -0.303092346442112 0.315432050303829 -0.0905078976608802 0.144504471524333 0.138736713071736 1.04398342092268 -0.616846103272322 -0.346666278612111 -0.68022031830763 -0.040053755588143 1.17848839105799 -0.390872339493275
Rv3205c -0.715786452245143 0.226091408631338 0.157153860979044 0.721214460821573 -0.488507304021181 0.280601738492171 -0.628053717079488 -0.95370487622694 0.9482058400594 -0.505107601141802 1.38993949567834 0 -0.81961955678364 -0.744979516172564 -0.0149270835943207 2.60592701474380 0.784251277583146 1.28045852585525 0.736207487361686 0.822626711522704 0.943134994263013 0.36519808633448 -1.5132213892038 -1.35694194268119 -1.27251265124794 -0.110285982742508 1.05702077167618 -0.875719195779924 0.516912268572728 1.03842382080424 -0.319358807325770 -0.0294638135474524 1.12494515729031 0.154808253439777 -0.637387184941291 0.650010857099883 -0.714925104294759 0.964827709497565 -0.0957127646518888
Rv3755c -0.441493224197138 -0.402492410662578 -1.41144319956358 0.294536533526513 1.73643638989329 -0.858525631729084 -0.367144309329024 1.51603174385453 0.760536196065803 0.425918513570807 0.916159770843165 0.0205805398849226 2.54229056427629 -0.214848685308551 -0.407511237131401 0.228612230952048 1.44734026099615 -0.513321975362234 -0.669226086791136 -0.370645753384061 -0.438981700816805 1.23615478900562 -0.0154953382123896 0.304284389654706 0.318864360097482 -0.297188349716751 -0.585588857252365 -0.660441342497506 -0.98832543918152 0.709099741728578 -0.212550543749617 1.60105733085423 -1.39979264644356 1.26296900405849 -0.178550005440723 -1.23947754912570 -0.270150804551485 -0.685717795315073 -1.31451048245222
[+] Show/hide bicluster #40 motif PSSM #1. bicluster 40 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0 0 1
2 0 0 0 1
3 0 0 1 0
4 0.666667 0.333333 0 0
5 0.333333 0 0 0.666667
6 0.333333 0.333333 0.333333 0
7 0.333333 0 0.666667 0
8 1 0 0 0
9 0.333333 0.666667 0 0
10 0 0.666667 0 0.333333
11 0 0 1 0
12 0 1 0 0
13 0 0 0.666667 0.333333
14 0.333333 0 0 0.666667
15 1 0 0 0
16 1 0 0 0
17 1 0 0 0
18 0 0 0 1
19 0 1 0 0 [+] Show/hide bicluster #40 motif PSSM #2. bicluster 40 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.5 0.3 0.2 0
2 0.5 0.5 0 0
3 0.9 0 0.1 0
4 0.1 0 0.9 0
5 0.1 0.1 0.7 0.1
6 0 0.5 0.4 0.1
7 0 1 0 0
8 0.6 0.2 0.2 0
9 1 0 0 0
10 0.4 0 0.5 0.1
11 0.2 0 0 0.8 |