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[+] Show/hide bicluster #38 rows and columns.
bicluster 38
Mycobacterium tuberculosis H37Rv
22x35
[+] Show/hide bicluster #38 rows (genes).
bicluster 38 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #38 rows (short gene names).
bicluster 38 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #38 rows (long gene names).
bicluster 38 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #38 rows (NCBI RefSeq gene IDs).
bicluster 38 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #38 gene upstream sequences.
bicluster 38 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #38 columns (arrays; conditions).
bicluster 38 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #38 ratios.
bicluster 38 ratios
Mycobacterium tuberculosis H37Rv
22x35
GENES Antimycin ARP4 Cephalexin Clofazimine Clotrimazole Deferoxamine Dipyridyl DNP DTT EMB GSNO GSNO_CPZ GSNO_KCN GSNO_menadione KCN Levo menadione mercaptoethanol NRP_1 Oflox PA_1 PA824 pH5_2 pH5_6 Procept_6776 Rif Rifp SM TRZ UV Verapamil X_109 X_111891 X_124196 X_59
ORF02877 -0.71123766360453 1.32486789996236 -0.184371656331426 -0.0822487683967415 -0.335124308613649 0.210138569883714 -0.484060391244226 0 0.0348536993709429 -0.5300655890504 0.038917915147791 -0.231659121419253 -0.371594712374437 0.0127112980195396 1.80147212873750 -0.242839027235702 0.381275954221012 -0.503747637279524 1.60861073683005 -0.876502539177732 -0.98884274907181 0.706585124464945 -0.399155824735242 -1.18121340851842 0.945514931735484 -1.46323335584552 -0.231182188671878 1.38861269086751 0.943538127953976 0.285349810518758 0.190704396064665 -0.213438100718693 -0.456810315736829 -0.661338128497447 -0.539934764231242
ORF08109 -0.228400263619249 1.20874872581114 0.159931551232939 1.38256771398692 0.763953768335612 -0.138071548844469 -0.0895306675031733 1.49359087099692 0.0553856159051787 -0.114571309974770 0.128461686726567 0.461350457729078 0.435435821197925 0.331742696992103 3.27154184352266 -0.058386163682172 -0.514382247065916 0.236025189475597 0.451831997361965 0.128507477209268 -0.252682844356781 1.98688353517511 -0.606960505033458 -0.53295733978142 0.855783053966695 -0.887536302730344 -1.24502808215863 -0.171457833338059 1.68228134058504 -0.515619696404445 0.465646499700944 -0.48066878561577 -0.0456586496739235 -0.472574276113395 -0.0347231450975819
Rv0238 -0.308661624032371 -0.459097249560169 0.0345985706047667 0.888479963238053 0.255396326730053 -0.232711487463098 -0.231594432308280 1.22232097701659 0.263704884332495 -0.255912507704538 0.000710405526187091 0.934070000594111 0.477681822991887 1.80371159141298 2.41215143851278 -0.35308207014286 1.54594614395687 -0.787472920059968 1.05610456504412 -0.171042868775713 -0.0354271297170021 0.507000946339712 -0.824575108111469 -0.626066074765266 0.869429328650076 -0.69530680519819 -0.738023429580433 0.70251008340704 1.13658652299656 0.0552048911029381 0.525813236809316 0.00868465541514203 -0.314366353090279 -0.043567767080987 -0.0366385752737497
Rv0476 -0.416891036979854 0.995523123341308 -0.564800283878837 0.096305492445248 -0.399438186752982 -0.344593450288808 0.240880708292384 0.560921851578342 0.0943013514766797 -0.111482618806860 -0.174600023619572 -0.0633454531783437 0.64481696805503 0.764324014432413 1.26042079073831 0.267039410131684 1.85775088068064 -0.0277012769557215 1.96697916238634 -0.259241364471449 -0.220013994525065 1.03651972159783 -0.09917719077015 -0.147695008151661 1.15123397899109 -0.365743803211137 -0.12218190215158 1.04463165745126 0.87589438814348 -0.331573205686423 0.366668624858516 -0.113321876996190 -0.259276032379647 -0.241613909888644 -0.256472514274202
Rv1082 -0.236731847924380 2.14668356395499 -0.325592438650301 1.42359314319361 0.182681233103437 -0.291702339397333 -0.593046009613767 1.62771777759007 1.21980446142523 -0.236471102264826 -0.190251004903598 0.612686965427883 1.11147047146384 0.910728914359915 2.01288816934263 -0.714518887579801 1.19577319640455 -0.34934268104751 1.46366358950804 -0.485070931973889 -0.176486380299929 0.0976803691653248 0.164521679409424 -0.334946866079277 1.16459327098902 -1.49452775877752 -1.31536485612850 -0.235922576856839 1.54924610497462 -0.483813543357267 -0.203311115673857 -0.201237152258590 -0.199326166896938 -0.427112733824011 0.0526386193845951
Rv1083 -0.142578759871865 0.34506156913097 -0.184298650989862 0.8819102131747 0 0.0506157178986527 -0.561257283884185 0.372584255616483 1.3070782986324 0.6356686576596 -0.382218953773709 1.18597184984701 0.58238021254242 0.419921514027416 2.12694909013079 -0.843724577811108 0.342354065631836 0.0990617367658984 1.30008809283713 -0.84861485163016 -0.271230775316314 0.119565990305936 0.304354783147296 0.538398193471413 1.54850119177494 -0.321709431565078 -0.311029951238199 -0.644963580663629 0.632408242638059 -0.170045523796526 -0.0393309471344822 0.0389466882428254 -0.0737592196156207 -0.0498532688819912 0.552680394231296
Rv1102c -1.02476814587088 1.53512041658874 -0.159382245409222 0.87083054711226 -0.102214582721188 -0.298360216902542 -0.234558488601424 1.64915252874539 0.8093128178193 -0.131987648596149 -0.155752270619839 0.467659409233117 0.914668392892145 0.934875780590151 1.61705871421254 -0.819078086469296 1.00716289380024 -0.358556564248256 0.354805534599422 -0.937831808111634 0.0303956211847602 0.711142795310814 -1.1183898412083 -0.484367233012934 1.25770733115743 -1.41800419809838 -0.318377232371115 1.41118845520277 0.436035704014669 -0.251160079817558 0.160522836678545 -0.360464005171167 0 0.136242561861841 -0.323607689570612
Rv1219c 0.504829571262715 0.476748114509603 -0.420924347790319 0.726213119067725 -0.0261507136627726 -0.301606032729835 -0.0423667300920407 0.893004106551694 0.121848807578555 -0.121539782274062 -0.219612998910407 0.513075786924863 0.115115053373915 0.166691355777543 1.08361505262450 -0.334495465838475 0.186458767300906 -0.180097685772161 0.872452812299403 -0.239392227581763 0.188071596211846 1.37520535504767 0.273253023318341 0.170164518892430 -0.170992959511143 -0.450812032963583 -0.669833607949172 0.262915596041588 0.83915399273924 -0.29228200656284 0.875239776764356 -0.194260069390718 -0.0777687276663365 0.0506702120969105 -0.219264504983281
Rv1288 -0.230224121944489 1.50477604704792 -0.0964342292343386 -0.633166377683086 -0.0419539325573916 -0.060508770315117 -0.819942223663307 0.112633172308952 0.290310533223877 -0.106928289019999 -0.160073340335442 -0.330010024114758 0.87648379263338 -0.214375177349022 1.47206608396354 -0.221641824130878 -0.525467291480527 0.70466416706928 0.911837262349244 -0.320585390034501 -0.0743424462406952 0.563530960689672 0.286184332735958 0.0322245438173466 -0.103149523691248 -0.832438081598932 0.747901942452228 1.14951299386894 1.20691222433827 -0.0291707547266446 -0.180768502569383 -0.166520719566900 0.150552513687800 -0.330433644448197 -0.562158253389887
Rv1574 -0.209034679521015 0.927519894049391 -0.152393961399331 0.144341383961598 -0.1835966303238 -0.463054091421517 0.00401282299830371 0.0681206390274182 0.408098208700952 -0.319901416704366 -0.604143435041785 0.111996833044266 0.125257580834258 0.221668454966759 3.07225306613382 -0.341499562137544 0.224063663144703 0.184951505880993 0.96986420201666 -0.110106017487803 -0.0581810237187523 1.00284289917713 -0.164274158950439 -0.238914536302864 0.256422458158652 -0.268997815277829 -0.00694853773067357 -0.5408812205861 2.58557393432954 -0.642255621662106 0.814014454633992 -0.402376671872272 -0.315525411216611 -0.254562809742350 -0.364014867890581
Rv1584c -0.588269352179152 1.68748917711788 0.101093424509876 0.60455668539524 -0.0551259603941503 -0.366106973057992 -0.142401543145614 1.24175412690651 0.589167531633607 -0.288686832548934 -0.247260259305688 0.937811707694462 0.930084868064473 0.267163477133724 2.17004231958204 0.253452061464551 -0.0571452419218753 -0.354007938938233 1.73882495664218 -0.0829473744332692 -0.564806518296094 1.16519514337958 -0.21407884258187 -0.389035717278505 1.16371452226027 -0.532720836290579 -0.426704260836161 0.382803322570341 1.95136571876321 -0.488938917287299 0.133248575022093 -0.484950011998922 -0.311674358951997 -0.347365954171436 -1.11763319591283
Rv1929c -0.453581981923288 0.0884878977504926 -0.192323836102230 -0.485633835849508 -0.0854655741088659 0 -0.0227810430601263 -0.343965944662581 0.284473876365987 -0.365544619072032 -0.475388875096157 -0.00990182430748837 0.327690011527321 0.325827020586061 2.05722461696834 -0.0849713227920342 0.595629690545042 0.170593198532149 1.64963623838055 0.0703236613398066 -0.430229300453624 1.15599044172263 0.229818888141680 0.229818888141680 2.03121803572594 0.164208891872866 -0.117034465395202 0.156730568194929 0.618905907945063 0.229818888141680 -0.458258933227508 -0.368610988220442 -0.274792990215285 0.114200359791672 -0.480348297679875
Rv2034 -0.300230284722390 0.0258894525018827 -0.196373056250751 0.510062073210651 -0.272118311570554 -0.473366882047608 -0.130669321725482 1.70537112888928 0.634186689791188 -0.434347993756654 0.141612360220597 0.350708271765802 0.766936777770334 0.300279113718845 0.412302234851072 -0.361010523472302 -0.300475170310555 -0.233076867580755 0.67387000841039 -0.531987505512434 -0.272738913813292 0.314072051043526 -0.112446524307606 -0.109515634760066 0.489267263221536 -0.44869735435989 -0.308235879914859 0.839309928188416 1.93024253602899 -0.761559192239325 0.272019335056333 -0.483777961540825 -0.60998509754701 -0.261415201460546 -0.556590809678058
Rv2304c -0.423022886114415 1.85400580736434 -0.276543216415027 1.06859475466425 -0.179178799443817 -0.195438240002800 -0.404774805931173 0.680832935560653 0.480222443276103 -0.76184904366359 -0.00751362313903369 -0.0232576589182520 1.61228761535174 0.26581783693035 3.35435991537372 -0.454339664315225 0.36495512898976 0.268456093685936 1.19884669299574 -0.715099161060516 -0.268684527088912 1.82975946971285 -0.315263747982613 -0.828359437144085 1.34447109861912 -1.44198860670771 -0.932001623228118 0.0756208099402551 1.98787831084934 -0.835690931297022 0.402673815940894 -0.670336016405344 -0.552258147875795 -0.617627450275111 -0.64565238967795
Rv2374c -0.444977604233274 1.57802383442972 -0.352330320576122 1.00208044102777 0.0163170763869567 -0.475260272894941 -0.276407167438256 1.9136158005747 0.593772940388147 -0.513371069192837 -0.567301501679837 0.596276955743887 0.657431243004622 1.09299157647772 2.91982659176242 0.298670101670408 0.966283915717696 -0.503473450303170 0.566373779034686 -0.537726707982482 0 1.22055660159135 -0.261262692073971 -0.604271423590951 0.95432513555885 -0.461936347810311 0.208544346815114 -0.3743231763252 2.41034327708293 -0.70652522808829 0.067119778307342 -0.370778958339924 -0.352072484564443 -0.360795515629942 0.165097148588179
Rv2516c -0.251598022021851 0.66020967949927 -0.679786986037085 0.125351825158792 -0.263927565206228 -0.456115273856195 -0.283719856834885 0.5455426833414 0.821517657145998 -0.327619052646181 -0.608084380734596 -0.488146023180401 0.74974435826547 0.0806877011120677 2.58469089028553 -0.245019047578421 0.481168926681985 -0.31101794791888 1.71975784814224 -0.438623803389784 -0.734881073465637 1.39544505505800 -0.152824622895712 0.097730265502725 1.49263266773536 -0.195689524819547 -0.289841608762599 1.02861344422089 0.634484132532735 0.287280691580248 -0.127960569547641 -0.0633387654704496 -0.655641959293659 -0.155310693397851 -0.210654199817047
Rv2517c -0.731451151266946 0.873581731551787 -0.400364508599824 0.657220688888867 0 -0.315288518897147 -0.182805103766615 1.07123208655304 0.349560554418197 -0.247667010829217 -0.0869756218694275 0.216127725160357 0.327214123518037 0.406300485984919 2.27036904881210 -0.255000564446289 0.404034846897687 -0.231030196884250 1.62590523286569 -0.280153172019705 -0.71540947749827 1.74569598799269 -0.384669283142832 -0.476637198126311 1.11796226053671 -0.320054599188835 -0.367256346320733 2.04719225123782 1.35271291884726 -1.08816299204982 0.0599054386641091 -0.316529233451907 -0.371860925666867 -0.332193341775911 -0.519644351339745
Rv2650c -0.450340688754867 0.0441071512907482 -0.0110501152919428 0.162300205871253 -0.190651549087149 -0.240838693551886 -0.424099858837117 1.31559068501902 0.975209882985739 -0.586641873324626 -0.126177843748525 0.374194049272682 1.29115913629794 -0.387932377576395 2.15080184138295 -0.199153879510118 0 0.183322158673742 0.417119610210375 -0.304314105035559 0.171695621933997 1.52485307299822 -0.0407679658284564 -0.347011045720545 1.75926665101224 0.205628326465799 -0.152422155676481 -0.0357706579246352 1.36768874868858 -0.282945215366749 -0.364732821923482 -0.49168536766859 -0.208946728054943 -0.0436277004757178 -0.109529132307313
Rv2878c -0.285458772821449 1.91418787394787 -0.0577795613730296 -0.295986851917025 -1.05939244422738 -0.566673975653199 -0.257775893063021 1.31142550050819 0.66405699298176 -0.892549863822281 -0.697394425515209 0.369329170886375 0.00370514316522704 0.889312168976608 2.48452250520371 -0.224918920694866 0.408162449332408 0.483000941135884 1.32393410444694 -0.391273103410275 0 1.44841387264466 0.389036832771101 0.197126187619408 0.517195379475729 -1.16297911674688 0.466369472913544 -0.146190566652611 0.904116385561438 0.370558080822286 0.469696289833051 -0.288601158824567 -0.354372877349921 -0.244023052901030 -0.336228585171995
Rv3182 -0.319195626259799 0.534432676976187 -0.139857446396314 0.86644188186391 -0.122818557970916 -0.350470121855217 -0.349251743392557 0.987988548619983 0.648745752630277 -0.0838638092075787 -0.245321919529283 0.172166579230348 1.17581712741797 0.794866050292739 2.73098195051351 -0.248342492418324 0.414349202954396 -0.299233318578318 0.168040786966254 -0.0333740949732832 -0.500339178385304 1.92094175481761 -0.376199471003013 -0.438498161998866 1.52132004566532 -0.429725683350241 -0.20697702684277 1.23222350417835 2.09424162837415 -0.349652418118768 0.191781735402683 -0.0247407201786692 -0.33320266646788 -0.268319262565836 -0.0299315396968304
Rv3424c -0.209838273088494 0.561645580217663 -0.45663907162982 0.449569061857576 -0.197952674383234 -0.169181802006831 0.51478005813424 -0.327419543783049 0.66051577780957 -0.354547814055089 -0.495077076650037 0.462184195002179 0.74882637893541 -0.018418652974275 1.65148017539834 -0.354691041935211 0.529004258066478 -0.184910528673351 0.247739005299114 -0.581676507748634 -0.445303669771248 0.896213072149506 0.387832080712637 0.557296232089104 1.72540746728022 0.338368129347834 0.341740390772747 0.0222847695339738 0.754613455849953 0.318658532769554 0.533094266494967 -0.599197173786695 -0.199883700538905 -0.160390793146814 -0.201547755528468
Rv3610c -0.99580015098249 1.63269983748537 -0.497374476688671 0.894521020044583 0.113437559662793 -0.489966559251528 -0.816672090025615 0.817527680256508 1.39349470994629 -0.170771492708379 -0.79458183969893 1.1114261427607 1.49982495300527 0.393836263057609 1.65299559715043 -0.277206325606024 1.02678537650558 -0.502612720155447 -0.279396644306713 0.395335780896300 -0.412417889936332 1.07561329404431 -0.279664031488837 -0.967883830550304 1.82368217197994 0 -0.754207353637603 0.174627638995772 1.48864399313531 -0.106174429709084 -0.105581489789356 -0.240781444364131 -0.476902362116024 -0.0619926966529559 -0.656728819027898
[+] Show/hide bicluster #38 motif PSSM #1. bicluster 38 motif PSSM #1 Mycobacterium tuberculosis H37Rv 7x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 1 0 0 0
4 0 1 0 0
5 1 0 0 0
6 1 0 0 0
7 1 0 0 0 [+] Show/hide bicluster #38 motif PSSM #2. bicluster 38 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0 0.764706 0.235294
2 0 0.176471 0.176471 0.647059
3 0 0.705882 0 0.294118
4 0 0.058824 0.941176 0
5 0.470588 0 0.529412 0
6 0.058824 0.941176 0 0
7 0 0.235294 0.764706 0
8 0.941176 0.058824 0 0
9 0.058824 0.529412 0.411765 0
10 0 1 0 0
11 0.411765 0 0.411765 0.176471 |