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[+] Show/hide bicluster #37 rows and columns.
bicluster 37
Mycobacterium tuberculosis H37Rv
21x37
[+] Show/hide bicluster #37 rows (genes).
bicluster 37 genes
Mycobacterium tuberculosis H37Rv
21
[+] Show/hide bicluster #37 rows (short gene names).
bicluster 37 short names
Mycobacterium tuberculosis H37Rv
21
short_name
[+] Show/hide bicluster #37 rows (long gene names).
bicluster 37 long names
Mycobacterium tuberculosis H37Rv
21
long_name
[+] Show/hide bicluster #37 rows (NCBI RefSeq gene IDs).
bicluster 37 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #37 gene upstream sequences.
bicluster 37 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #37 columns (arrays; conditions).
bicluster 37 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #37 ratios.
bicluster 37 ratios
Mycobacterium tuberculosis H37Rv
21x37
GENES Amikacin Amp Antimycin BZA Cap Cephalexin Clotrimazole CPZ Deferoxamine Econazole EMB Eta GSNO GSNO_CFZ GSNO_CPZ H2O2 methoxatin Mtm Nam PA_1 PA_21 Palmitate pH4_8 pH5_2 Procept_6778 PZA Rox SM Succinate TLM TRC TRZ UV Valinomycin X_109 X_121940 X5CL_PZA
ORF05164 0.234187219593873 0.131083433537647 0.449406561214358 0.0206965382899000 -0.0825850234527977 0.301787343485116 0 -0.785358452897458 0.385632162601671 -0.407214467439809 -0.0833290317676569 -0.167062232514176 2.3573293561765 -0.313214639838408 0.238110929517282 -0.306037184572351 -0.00734880121427941 0.234028269069256 -0.0888650761062963 0.551464976305012 1.03056239618396 1.19840098919268 0.980848785422315 0.66802382966035 -0.624835901946456 0.580457875839549 0.207696251320368 0.670394178350564 1.02028191598528 -0.229940379961062 -0.391786772079347 -1.31425146332113 0.189348562671152 0.0134330607692766 -0.0598363985898122 0.320670198034367 0.53177378131647
Rv0496 0.173431989945462 0.553159866885767 -0.106822465527034 0.0772335517546632 -0.211050364431702 0.539057369597744 -0.169683831452748 -0.536557067810713 0.515030192336493 -0.602700612766644 0.64159957960121 -0.320539555491235 0.776019434096866 -0.0803345947330655 -1.56274599910346 0.78781431561801 0.311802243874569 1.06002505234173 0.176376097363230 -0.00435815253758396 -0.695174542678654 0 0.00902003704531837 -0.136773644378219 0.636780087492108 -0.0947415697925394 -0.696953797445999 1.41034207117965 0.501801211016606 -0.173749170925878 -0.580922867062805 -2.39058447560763 0.987412014782468 0.152582220095935 0.319641890547236 1.05658512053061 -0.0658985217148442
Rv0501 -0.0241755162759259 0.323543208198525 0.480250759175503 -0.549774288768971 0.39215696607073 0.00506645486594652 0.102477634352596 -0.196883333380728 0.276759531962375 0.0112505919533846 0.30620370116199 0.180713298220661 -0.0238910906923457 -0.155641064759950 -0.733772231024459 0.264995234816635 -0.321060027005258 0.60036743189736 -0.69433435967339 0.66234963769376 1.23574258931766 -0.342697637674274 -0.081362778003894 0.478314060998642 -0.863407452184943 -0.462613182988245 -0.175030511696127 1.79061495812447 0.250850857633277 0.688925398490393 -0.588632501972625 -1.00891741126378 0.369833362204802 -1.05416056441841 0.742867386531182 -0.313955591872088 -1.26263493677217
Rv0510 -0.0162726722725436 0.429050272378646 0.32120484428926 -0.0646744024490012 0.382136505698998 0.448872623760871 0.527011460086894 -0.291510913746599 0.695644477455034 0.369312288696312 0.614771683745485 1.38183371675066 0.126147242853525 -0.0418930172666848 -0.996425661267435 -0.603809282649823 -0.117115370839443 1.02852694244016 0.0673611176455564 1.10248065372721 0.684479338374945 0.209373381251832 -0.578971651381692 0 0.443203860881927 -0.309154280265076 -0.312379567496385 0.788634357776678 0.149603312530357 0.574856337123783 -0.962851079880634 -1.73265658902757 0.780479001472832 -0.0400325245017528 -0.00703038365484871 0.118040742183519 0.339690970202326
Rv1076 -1.23332326498418 0.157707803826221 -0.364060179045647 -0.0267706787680451 -0.467514543320851 0.0511005305309213 0.259157009691783 0.0589529237536247 -0.0495721407471499 0.150787086630762 -0.0115060358803478 1.12767438329081 -0.117399954798305 0.596455860470973 -0.0335262683454602 -0.426601316162054 -0.0833556028773653 -0.544459836025299 0.0328943542437938 -0.352078342180631 -0.110518879612817 1.06216087438282 0.577107180428713 0.54799775827983 0 -0.191861201544899 -0.0344275559993008 -1.02893489264847 1.31817450717801 0.313958291569045 0.133102367041679 0.978626206423461 -0.0457067854592864 -0.19024847663393 0.160460152775961 -0.318376728975400 -0.380528503012509
Rv1194c 0.365417460893962 0.0210923727150043 0.321211052444754 -0.411934226204059 1.07461730664447 -0.537531443118942 -0.394770776270358 -0.825998538514155 -0.0140992115292573 0.162144570601681 0.117732818956893 1.11753896004242 -0.290944291383571 -0.267137192865454 -1.62925230401596 0.761078464919009 0.583205876335142 0.751266523803038 -0.0904731990922501 0.146471727443350 -0.0504062264859886 -0.264361807022079 0.125824748453015 0.129746018245351 -0.310092617987948 -0.107345698654154 1.45463589986355 0.14757290264956 -0.367524909648679 0.676203648105946 -0.215985307961592 -1.20250150168235 0.651170108244973 0 0.217313991733392 1.31239205672507 -0.528220558195902
Rv1396c -0.0630953106591821 0.254892860290616 -0.0751370386701703 -0.448371798096995 -1.03775105845314 0.494723635009997 -0.139832303404991 -0.710321655557496 0.496029582486037 0.0279302898392857 0.672397818752847 0.625689693848314 0.0559307759734245 2.08176308240862 -0.77726845761896 0.212122222973740 -0.476975174548338 0 -0.448544218486920 -0.305421388828567 0.0602568071694884 0.545758717334879 -0.889885973115995 -0.720920838145831 0.271527809315413 0.173271716606848 0.745547231885566 -0.424277718685185 0.312725229947852 -0.0976463034586797 -0.479884550879319 -0.779908964272003 0.743209243890823 1.58454468357494 1.35858418884848 0.627597452388913 -0.329079473183889
Rv1707 0.419473055346549 0.24979841143323 0.0378165225854523 0.314678992007738 -0.621524998836396 -0.186180777065304 0.247906958367400 0.312319814133583 -0.471845647791192 -0.195011416883025 -0.138292863624133 0.0381144309987009 0.0440669207790706 -0.736626279118779 -0.886522530839928 0.046042780493193 0.531290128738564 0.176819517517981 0.184589358077446 0.179026604350150 -0.153970115611480 -0.894160454261003 0.178974527178821 0.101722912631023 -0.694504458878049 0.65965962311184 0 1.0421915734889 -0.522143030719477 0.119301593778547 -0.695176471367427 -0.892568839389105 -0.212173174994717 1.15610159681837 -0.602965808285201 -0.0373254369908736 0.808166251924242
Rv1826 0.375044545692633 0.510170676602188 0.290805887653242 -0.178972860325950 0.651803194331031 0.239831791356126 -0.134395721326443 -0.548551908443244 0.420968011652181 -0.132965022840729 0.198289970769924 0.165072742617161 0.310033893540062 -0.865634739825297 -1.11931689529821 -0.5523218040398 0.234846298054441 0.61072556449748 0.0142600529640270 0 0.0995610527998818 0.274827944018130 0.429348476998304 0.30095251600698 -0.0151877140355691 -0.215805946605131 0.585763328327667 0.245710768788468 0.236936660619731 -0.0251632590198125 -1.62151342901104 -1.59630585021628 0.466231883392397 -0.338956089922334 -0.195320743421448 1.41322509952118 -0.216266488251637
Rv2398c -0.235317873212769 -0.541852787001597 -0.187689224950912 -0.54790347693821 -0.818019358984847 -0.0442462724485414 0.323450135241066 -0.230321460468727 0.00416701013416292 -0.0367272561260071 0.201508374184791 -0.297054108851949 -0.299195451548445 0.389815960563196 0.236863251176549 0.260324081628188 0.136495479107569 0.285505933464255 -0.365675907947643 -0.234735582241032 0.207939525802744 0.269409817383288 0.549985849469688 1.09418768097657 -0.149218479460213 -0.385133168815443 -0.199610017604456 0.150730272924047 0.0316013327147863 0.0991194718487048 -0.0344141224371526 -0.527663229347902 -0.70051602102335 -0.548434227499775 0.14292976527885 1.0024125679783 -0.614415897347582
Rv2399c -0.394500413097643 0.00510449034537225 0 -0.820490680356582 -0.809459058799761 0.04725200692217 0.0812926167711498 -0.299109538965751 0.270601587407996 -0.52973503059565 -0.364208303750271 -0.441374292793521 0.0633853789138691 -0.00616084176398169 -0.303329379293601 0.0536976365697368 0.575028429142761 -0.337149883343056 -0.803541216905011 0.076376688735255 -0.315961290964714 -0.993673249853361 -0.181479826328248 0.323985925156407 0.274112873898748 -0.391009018006731 -0.981773502237153 1.05112359416598 -0.500191704060775 -0.0760151771752703 -0.310540921604004 -0.00325761859092828 0.00120211177167811 -0.089709702181529 0.235260459825640 0.172515375015604 -0.673552194627593
Rv2435c -0.124010961958050 0.166036152638504 -0.0381167330956501 0.687473912603258 -0.961468626389851 0.321780662437155 0.39754984674495 0.207416127638473 0.132286619159448 0.069677677845424 0.210026076561660 -0.332533298545251 0.300400918713131 -0.246860643388565 -0.124638920044512 0.665524875299705 0.186058007097155 0.508319377525007 0.305020734210463 0.814969504642304 0.4965024823929 0.861681558071812 0.675998163508265 0.650840585952405 -0.193564585362108 -0.111997813308327 -0.222551011577893 -0.238905597327742 -0.0977900168225643 -0.541060298246355 -0.253351149271097 0.235041937085824 -0.0140960933004802 0 -0.052109638314762 0.613956224942704 0.524767208583764
Rv2594c -0.0915592315033095 0.0708161249665781 0.0202868565272099 -0.782123236545277 0.212066058939436 0.964831105368342 0.182927802825617 -0.413608725926847 -0.138805848292875 0.0345115784215996 0.397799570870468 0.859480658587385 -0.155392230023322 0.390985223815392 -0.789987085899737 1.30139685797474 -0.350794340057221 1.12299021740649 -0.239891892769468 -0.065109197681284 0.650173817668901 0.280280131206045 -0.218259447235721 -0.548807085320718 0.924440813587964 0.633999439620718 0.95918871298831 -0.235004895991761 0.285485761698503 0.345192680201223 -0.93446856290027 -0.306812814601950 2.84814339529914 -0.593532340104152 0.31177849223274 0.517801596411143 -0.281266202334608
Rv3025c 0.0631687321205558 1.01486867274575 0.534236856840589 -0.257852557628294 -0.450438999297548 -0.0419775115378094 -0.0632706604636361 -0.109852709294075 0.240524426659457 0.0306570021179144 1.28288531575473 0.313021891095367 -0.187359432621000 -0.0492613795960202 -0.696707755767424 1.22121681516718 -0.000642251373572846 0.909028505881915 0.0353811490413799 0.8802264348681 -0.228707130051236 -0.0490584295808993 -0.797598690413493 -0.83195764962632 -0.021375688457442 -0.140695211015799 0.483188099145338 0.578939775829524 -0.286086730306203 0.888663347992547 -1.18931547919613 -1.92906538152137 1.14684115040795 -0.698975486740525 0.847089699481343 -0.0779823865230035 0.163772001930882
Rv3221c 1.10850570201016 0.609188190987823 0.372323504695209 -0.66763064689998 0.605725995221424 0.44435535444828 0.0231074097309350 -0.788988683402014 -0.283294985108377 -0.160012117278669 0.960826197871669 1.10056741195561 -0.325078503107443 -0.397921784496104 -1.22655831943647 0.831027477378948 -0.675799097380076 0.489128904959884 -0.63754747449911 0.0935688749473814 0.495393675378858 0.965852836551227 -0.536056553458458 -0.847507860256884 0.86507287652777 0.145084139099424 1.26100421476015 0.110191779905385 0.449129361208451 0.420913892374654 -0.631019757809944 -0.663665535833803 0.925470495358967 -0.545251279441015 1.01427669539700 0.377164543923921 -0.691415225115134
Rv3341 -0.61587584517412 -0.177501573117827 -0.421111970628552 -0.785499483627534 -0.450173147790741 0.0958942959077372 0.340604648771045 0.168033408119029 -0.00567838515009872 -0.0359218946290204 0.0872128329721261 -0.126234823794637 0.024583932681756 0.111171796828016 -0.764572661185327 -0.103618255596882 0 0.154943465959829 -0.376002177483268 0.337453209640453 0.144247055316029 -0.200881527481458 -0.135341801856206 -0.00921314076479069 0.0795227165722165 -0.295724249991791 -0.558889146345348 -0.499557804993922 0.313176353786631 0.199961077130746 -0.270423584473199 -1.03403549952508 0.673593452357143 0.470296291220852 0.392626502320263 0.232452872418155 0.4584385325679
Rv3342 -0.210147619039174 0.175142927930739 -0.136723011390516 -0.233074574198326 -0.577713581142073 0.0231928953250864 0.553221522957034 0.255643042021817 -0.0850695552888805 -0.104941757159548 -0.160554387256769 -0.101069543801871 0.340011249491070 0.380784034198686 0.0469093829064891 0.0935437466557173 0.393051379423596 0.172370564653355 0.0908119295902311 0.241440035196147 -0.0178405216916611 -0.260520976458514 0.210485785152337 0.325634473758652 -0.234925399306327 0.0491750107585323 -0.595651542855029 0.159219085861286 0.648653234681957 -0.0297658815523367 -0.500075331119101 -1.12573299343585 -0.148055086183463 -0.471761034627018 -0.0847106499407011 -0.381848218889512 0.579547991489892
Rv3360 -0.777147818067188 -0.0155553004068380 0.395607345740143 0.0563932328034752 -0.502347512410663 0.0240799831959817 0.044420636781572 -0.136501113059874 0.205990584209394 0 0.187358149785808 0.346773028277647 0.116409601319391 -0.495342437696835 -0.176399473468152 -0.0424734322825259 1.03017079094828 -0.665342472083367 0.0739739004584273 -0.172265325094601 0.0794388204351016 0.0833947053946991 -0.32278004152649 0.0530532048857356 0.509225397717982 0.0239204621797975 -0.797494033128613 -0.232932618748887 0.677865769855758 0.224249957241229 -0.0782448354128905 -0.830002221137334 -0.62073041810657 0.912668599763185 0.00812367949493143 0.186956960047042 0.686018794307418
Rv3370c -0.0551968598685849 -0.182882080041124 0.295263381272806 -0.139411617992716 0.379550110215855 0.131557194825380 -0.138832852988391 -0.215160934990921 -0.171640357564654 0.351538661265492 0.367827378433038 -0.138825246159555 0.0193704717339363 0.257445570762756 -0.430649660725215 0.554001940364875 0.596921697524583 0.372489067942654 -0.149466657005184 0.537261315120344 0.0943609859841312 0.0165417509490214 -0.431473616529881 -0.463858070158790 1.08029165263607 0.0102816566616260 0.194593609349295 0.0815265331971245 -0.0592984120217441 -0.260924291665678 -0.131959611965679 0.503754188924416 1.02006081937789 1.18065693796079 0 -0.151705477296636 -0.324135290858815
Rv3613c -0.433502642811446 0.614396422205406 0.438688649434226 -0.417654674700713 -0.198702766769551 -0.218592356571680 0.294547178247471 -0.396703042708688 0.249748752820945 0.340484597765542 -0.484007923472083 -0.68416257740256 0.144004598905781 0.796080071815275 -1.50561580442146 -0.357368792279392 0.153789253663972 0.124133332765621 -0.60086878789599 -0.134548290957847 0.00211675533048283 0.619478757472964 1.09945058304677 1.53125401028925 -0.507048757266953 -0.654472518673345 -0.244345354089752 1.30832955404808 0.0358386179826596 -0.734358865302794 0 -0.771124675538339 0.112599430459006 -0.865670089889905 -0.110501634473341 0.0584774831296951 -0.887413411895796
Rv3753c 0.608150673804174 0.657330913805618 -0.181654285023292 -0.572643920249548 -0.124099786978861 0.0143908786756873 -0.29250156696226 -0.06831622838038 0.188765207087961 -0.429172298538721 0.328603746257322 0.811669124902094 0.598790802627034 0.71664272810935 -0.449562654038311 -0.605503252197517 0.128303776642229 0.0762465503106387 -0.61995411757768 -0.606875839690062 -0.527186542810935 0.328921620612465 0.0147412512412999 -0.0530972002409659 -0.478935308537642 0.209279924304454 0.49135970256216 0.553601063133544 -0.0405486533676242 0.393493954141854 -1.06453472237952 -0.713777626476817 0.0740862932350614 -0.571942154678255 0.133979110990328 0.489958778633556 0.252092535151045
[+] Show/hide bicluster #37 motif PSSM #1. bicluster 37 motif PSSM #1 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.1 0.7 0 0.2
2 0.1 0 0.5 0.4
3 0 0.1 0 0.9
4 0.6 0 0.4 0
5 0 0 0 1
6 0 0.4 0 0.6
7 0 0.2 0.7 0.1
8 0.7 0.3 0 0
9 0.5 0.2 0.1 0.2
10 0 1 0 0
11 0.3 0.3 0.4 0
12 0.9 0 0 0.1
13 0 0.4 0 0.6
14 0.2 0 0 0.8 [+] Show/hide bicluster #37 motif PSSM #2. bicluster 37 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 0.3125 0.6875 0
2 0.9375 0 0.0625 0
3 0 0.6875 0.3125 0
4 0 1 0 0
5 0.8125 0 0.1875 0
6 0 0.25 0.6875 0.0625
7 1 0 0 0
8 0 0.9375 0 0.0625 |