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[+] Show/hide bicluster #36 rows and columns.
bicluster 36
Mycobacterium tuberculosis H37Rv
28x36
[+] Show/hide bicluster #36 rows (genes).
bicluster 36 genes
Mycobacterium tuberculosis H37Rv
28
[+] Show/hide bicluster #36 rows (short gene names).
bicluster 36 short names
Mycobacterium tuberculosis H37Rv
28
short_name
[+] Show/hide bicluster #36 rows (long gene names).
bicluster 36 long names
Mycobacterium tuberculosis H37Rv
28
long_name
[+] Show/hide bicluster #36 rows (NCBI RefSeq gene IDs).
bicluster 36 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
50
[+] Show/hide bicluster #36 gene upstream sequences.
bicluster 36 upstream sequences
Mycobacterium tuberculosis H37Rv
28
upstream
[+] Show/hide bicluster #36 columns (arrays; conditions).
bicluster 36 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #36 ratios.
bicluster 36 ratios
Mycobacterium tuberculosis H37Rv
28x36
GENES Amikacin Amp Antimycin ARP4 Cap Cerulenin Clotrimazole Dipyridyl DNP Econazole EMB Eta GSNO_menadione H2O2 INH Levo menadione Min_med__succinate_ Mtm Nigericin Oflox PA_1 PA_21 Palmitate pH5_2 pH5_6 Rif Rox SM starvation Succinate Tet TRC X_109 X_121940 ZnSO4
Rv0338c 1.62028891571499 0.404808911393807 0.224222270921035 0 2.50197804627869 0.864447540089330 0.662350502396134 -1.98323392776202 0 0.225717045064958 -0.237249036995732 -0.425399208718868 0 -0.377121810182446 -0.512804954932057 0.845379564932292 0 0 0.865373975619277 0.840594671776702 0.926716800615088 0.655499686885558 0.87252583445777 0 -0.619738476249251 -0.479987386972673 -1.57305829688879 2.66092277545576 0.61892601501832 -1.51600386088690 0 0.621325815041832 -1.31691723318513 -0.351352721313428 -1.57862169364381 0
Rv0431 0.590294321323928 0.76733245651719 0.0886449131435435 -1.25346415413085 1.36134336552325 0.705285640692693 -0.219412806889174 -1.01518027343493 -2.46243001693970 -0.24514912292396 0.0929804475891021 0.675020278465413 -0.769853174790629 -1.39948188996464 1.07954541239251 0.462423747858732 -0.478900530242656 -0.987325039512344 -0.445452931956767 0.588332370595706 0.546548680115697 0.220867143632067 0.00691409622743675 0.185144180381942 -1.08817844991148 -0.777414437540064 -0.0888436338847578 3.15872650075352 0.808109330147145 -0.259702595825109 0.622105469803461 1.65051287465947 -1.19621245834070 0.433350911815029 0.0374506281785904 0.285043624174742
Rv0504c 1.07469683546810 0.478023497547024 0.121078837192253 0 2.78870489212692 0.634128664915299 -0.594751237309922 -0.210572363171343 0 -0.572423246286476 0.339371527259346 -0.358008317274616 1.78320080524024 0.0217603870183119 -0.371639688794677 0.149378111145501 0 0 0.502189620064227 0.97004128753046 0.141400173974086 -0.723415195894387 0.056035464205389 0 -0.456295579758556 0.0458828111719815 -1.04199082241579 2.77975124058709 -0.0608785668749492 -2.17711523372292 0 1.72646926858814 -1.18486490305354 -0.138398476698793 -1.19519230144162 0
Rv0638 0.548751967608203 -0.294937638464840 0.0308670752732277 -0.842063677812348 1.70731384344626 0.241207098918911 0.0836830862619175 0.1596287295569 -1.49053644396654 0.136846364832512 -0.189466238654632 0.278535513542359 0.347853904615464 -0.181313738020877 0.98269152170777 0.177747342747507 0.546821149928551 -0.127635127622378 -0.187616543992831 0.131216428287747 -0.309541472602330 0.246663202181649 -0.131476972572929 -0.316423020624223 -1.04827155061257 -1.22235860987523 -1.50841537952668 3.04154133633866 -0.0605141055983089 -1.60523370809721 0.195490322625210 2.14042948040549 -1.52570420595718 0 0.233639255776338 -0.043534393103653
Rv0639 1.14727421992904 0.747458863432796 -0.0143405691623535 -1.37547233866514 2.38839195124229 0.110489969179078 0.0953739904404905 -0.048249239722655 -1.18927291077247 -0.188345383496399 0.0767717657736692 0.132227947172705 0.446849285122381 -1.17433610667434 0.548528849274707 0.764704774407217 0.438266301486374 -0.283341037852999 -0.597256878507392 0.433790597090133 0.657392643731265 0.373021711715486 0.260827636244998 -0.436553848350403 -0.509226472326599 -0.762243736242421 -1.95915061255705 2.99924501947623 1.38857317270565 -1.23108841089734 -0.068380476460032 2.62404341612144 -2.1037522718889 0.258581787570915 -0.236588268620645 0.222784474678804
Rv0640 0.225000284729529 0.480016032103881 -0.300216098753128 -1.76516280263253 2.24701165655072 0.341613794463457 -0.37539431727447 0.240049751397889 -1.85314275838984 -0.168660064372402 0.40375545842413 0.342465208524312 0.0616965917533682 -1.25765279068651 0.540153000990985 1.45895071954008 -0.00668776498717495 -1.39738400090134 0.202250900302060 0.122709336180135 0.777074543693792 0.278643879233842 0.296459815953987 -0.704212749766671 -0.83484987597588 -0.479147830515825 -1.07175223377770 1.71363949373747 0.597038574235117 -2.43337339701169 -0.187087498089787 2.28495233571242 -2.02551654508383 -0.0148125522326644 -0.653781379614484 -0.394304853727824
Rv0641 0.495131282552637 0.35631458771925 -0.208560379778826 -1.53084298447888 1.06042128375231 0.37435955663741 -0.366324457107618 0.519050519935094 -2.07700343654917 -0.582376171257665 0.0868494060724082 0.463485608292197 0.0174394476476310 -1.02995237449723 1.73291822535041 0.898873646258377 -0.240656314556150 -2.04918758449406 0.133001717241645 -0.116080066120416 0.852409411920598 -0.000716753016845746 0.0233776102084753 -0.93716139736069 -1.14704207827285 -1.55607925044652 -1.10705393881865 2.71552602117927 1.37313527077644 -3.12795734795926 -0.308934621014471 1.57247982888375 -1.83100070592186 0.455475680914101 -0.301108453231297 0.636420743651489
Rv0702 0.91827368150076 1.08210652981769 0.47424116580786 -0.764265589480014 1.07180526236368 0.419003575272199 -0.316568665149901 0.177903980022604 -0.656502406543635 -1.03845580215162 0.204926034152086 -0.199519417090072 -0.877495493035793 -0.903896099272375 0.640180067347013 1.01475958778831 -0.326888549034387 -1.14126131544618 1.14590220789707 0.0289187188583124 0.959871203024543 0.361417074975206 0.480921506633966 -0.0344897307927717 -0.124163240971704 -0.0861380841614975 -1.34120218172611 2.15109067620361 1.43078866237913 -1.96285783903366 0.332095391106942 1.65756977533659 -1.13373040199942 0.250073287002451 0.226017431432222 0.132570602419017
Rv0716 1.14917204161801 0.492140956011764 0.507472624778967 -1.52261484118874 1.88791725845733 0.355665557566339 0.079201955063082 0.303250092391347 -1.98055647951613 -0.309051127703686 0.0333300444155683 -0.111291519450627 -0.234118966050143 -0.600886111807353 0.178217575655506 0.373718214933898 -0.14350813017552 -0.149100083423091 0.4354377602683 0.242618740810555 0.488604274812361 0.485684002661393 0.507993810820667 -0.178110460693125 0 0.0301682229822658 -0.77699322664537 2.23345082990536 1.46486065153225 -1.29047631716909 0.201597440880001 1.96564896615487 -1.67341866566232 0.321622553415811 -0.304949215143812 0.684569424059774
Rv0873 2.34565182663711 -0.390939326629139 -0.169223683241455 0.161096035943738 2.49338976775544 -0.0806932210862466 -0.230369839223796 0.0171142633891355 0.730190455957593 -0.219352893951888 -0.312754864793308 -0.059195601664134 1.7850566093902 -0.751677109646132 0.0813810862394978 0.212291076354826 2.1504057276698 -2.28729496943425 0.0745235284244264 1.01076298884372 0.278012065146120 0.345050639727559 0.0531532645329046 0.0380968928754496 -0.158703941834648 -0.00554986332985618 -0.625813303131742 1.50788336837945 -0.142739707264244 -0.596815872990723 -0.0153652435300958 3.11234350598785 0.347366265449433 -0.968393677914989 -0.350193602752309 -0.41538686898394
Rv0905 1.04147727535765 -0.531946115091149 0.176088046616157 -1.51320283316759 2.03534846956237 1.15693456841142 -0.400446807148074 -0.299453422487261 -1.13373128018551 0.07121943322189 -0.149768682142868 1.75658118994528 0.937207789228789 0.00347730581344773 2.02617368681866 0.399715881109278 0.755082884982594 -2.09029488725375 -0.0458601435782027 1.36623601780896 0.330680490795745 1.01313114853060 0.963297484292417 -1.07629142356363 -0.162096310982328 -0.155014661504471 -0.261224157303476 1.60504055983567 0.990379144373956 -0.988827417041328 -0.609413176659945 2.19526556820296 0.240626652076850 -0.0896427701727905 -0.703228647589808 -0.286129131643113
Rv1009 2.23213338009296 -0.323293691226477 -0.070906654792547 0 1.06499223234616 -0.598937457980222 -0.347814355016867 0.285008944586524 0 -0.893001837092358 0.0319094399938978 -0.0579414130109254 1.71504173896739 -0.972860174616734 0.679329276472672 0.526015935482486 1.27846486758768 0 -0.130266357710125 1.90284652460485 0.394447044961869 -0.346182584579867 -0.496421041396459 0 -0.146831750534384 -0.0314824338123237 -0.34409154023527 2.11122910261465 0.561691690984788 0.303149704647586 0 2.53842137739348 -0.777522500878373 -0.297638476518487 0.780823206667995 0
Rv1093 0.703560848336027 0.230936427399206 -0.932565693421702 -0.137251073533016 0.860217672341161 0.728662629262691 -0.245271917266780 -0.568655865164884 -2.26257930106587 -0.341437270527998 0.599811768135975 0.682964059626132 0.405331725165114 -2.08237051300930 0.853206960384598 -0.95567483267933 0.739571270985926 -1.26619073777154 -0.670745563043204 0.143609452463200 0.0217438865274406 -0.114917592340486 -0.458545318315048 -0.71026812759762 -1.27133213842374 -1.14881924585474 -0.686710507387125 2.68121484094120 0.472363328214063 -2.18423486727376 -0.559419699611827 1.56835254253386 -1.33868123201308 0.040604331604436 0.325314474342018 0
Rv1156 -0.345380178574112 -0.0671950795741004 -0.267235317138647 0.0134197412121624 0.470945888887928 -0.259974864802838 0.374741762414418 -0.0494696266494046 0.790058472847801 0.102573755851754 -0.37647339750444 0.282733703820866 0.728914835840246 -1.07905773301802 0 -0.158043728397267 0.689852677674399 -2.21321076632336 0.288828329912608 0.784790815940666 0.467009522597485 0.56265004857404 -0.131706927892347 -0.470944797986276 -0.685256448612816 -0.657055446345713 -1.80584930639549 1.41972369450121 1.06551685368739 -2.05859348164282 -0.188020794399086 1.29091806316383 -0.400372691402616 -0.291426680676984 -0.652702862520473 0.204104082602295
Rv1174c 1.69773803919487 0.217649973435636 -0.774670933593481 0.148059541172609 0.433544338174762 0.6003366206012 -0.839163824848315 -0.232310798097719 -1.29530531419800 0.0238560041530647 0.881360041160385 0.809530734215516 1.35830576945612 -1.32140310338204 0.537416796816954 0.00674854146281116 2.35805553616278 -0.315252969663175 0.0105803318432040 0.854232829031428 0.201110102161481 -0.696504741372145 -0.61832559857251 -0.606491365283098 -0.284627126756098 0.184106950295266 -1.70322389384119 1.62817430391886 0.406100567520412 -0.422038489505105 -0.900850817679464 1.49827979578976 -1.5516408420043 0.502540678955168 -0.474445637896411 -0.425587459952459
Rv1390 0.150725112802559 0.279498843544184 -0.76312930457727 -0.775800559430849 1.99789031944237 0.654035556798093 0.146422112229372 -0.499751842344917 -0.18872749070973 0.0151007317777421 -0.213464825542196 0.0857931672676646 0.206285331752238 -0.317161834114944 0.0342400380751875 0.810001861728002 0.653460326627073 0.223450201875318 0 0.320564076572742 -0.269684127112631 -0.722970451902496 -0.646379935736461 -0.154239583919585 -0.870544934192351 -0.733567333957755 -2.09836662482573 3.45821385425628 1.06012847467747 -1.69732758515340 0.351683747314875 1.63420364707213 -1.10361284098544 -0.263731914619857 -0.169595070317858 0.0469616053085408
Rv1391 0.421851768810892 -0.285555397206089 -0.079233323376662 0.552469878320388 0.0300437816572022 0.261067443310955 0.315613785534493 -0.119088238148568 0.140040395621724 0.0794350849001582 -0.101602693960397 -0.279495116595524 1.67298132486481 -0.788313484310894 -0.0881969490091239 -0.294913459177296 1.5413695060027 1.03328763052329 -0.590307562998843 0.212745654120966 -0.513619771435493 -0.00957632357898248 0.213188684075080 -0.408099059202279 -0.238081652543492 -0.225642670196100 -0.712727181918527 0.579916695027337 0.551428540598366 -1.01219570376065 -0.559605798169248 1.47417578997227 -1.47622361369789 -0.135625014931697 0.204856204906713 0.328862428632211
Rv1789 1.17225524256125 0.420834717803347 -0.206648055192124 -0.340135372187521 1.62175769735021 0.777206700238692 -0.440491499702549 0.154867669530418 0.0737767783901265 -0.777494003361222 0.906752302773884 0.467157964239354 0.152185978494422 -1.02650115177255 1.41393882604364 0.664187448683929 -0.446012224217534 -0.57867570628436 -0.942994652767239 0.53129520545267 0.66515494805324 -0.816362615198178 -0.785551855619695 -0.507490428713182 -2.58223022991842 -1.82853102238157 -1.82310985620689 2.25512142292532 0.378245724602986 0.355654024924145 0.288442665923143 1.98796579977578 -1.47281292410383 0.720344423595047 0.87237156291593 -0.633164701084422
Rv1943c 1.66959054271331 0.143078901856187 0.117212811312288 -0.786005810595187 2.20015700068104 0.669956048472163 -0.475706256462493 0.0167675676256764 -1.02040031132099 -0.597030044008988 -0.284594877613974 0.520828791658207 1.65463540636018 -0.753419762772363 1.00914555505152 0.144458654697086 2.53238831817511 -1.98735532191495 -0.408233668365376 0.798271120934236 0.819028568636401 -0.129406960097930 -0.0521672392738097 0.0777612882547453 -1.12612925694919 -0.595980720636744 -0.474689741510597 2.58063573297236 2.19080074116777 -1.41905040879511 -0.0243716829770286 2.78523886593618 -0.7238124213006 -0.159284540497464 0.0987865663893207 1.34520165170209
Rv2103c 0.503349770649152 0.236148704572332 -0.963262157954829 -0.365405059394605 -0.0602528900231026 -0.125761626124441 -0.17927319440739 -0.721108738150071 -0.343205400806805 -0.398893631880387 -0.228696798578507 0.0372801645978927 1.27388949255829 -0.609047858677651 0.283803190034055 -0.264995377544621 1.48255499509667 -1.96104148123721 -0.453037567002201 0.232946496666708 -0.410801636054605 -0.599635158384111 -0.601313092790936 -0.799309821493418 -0.838312592592239 -0.819822396515781 -0.377957811424080 0.664942212451266 0.866942356853015 0.57430441189233 -0.709576768938312 1.65801857766254 0.282433160923341 -0.123151202106608 0.265859266400874 0.0606573815949409
Rv2104c 2.22230129086982 -0.262757414437961 -0.378122631028502 -0.459323442987694 2.24266872782624 0.511279933541769 0.0219988847928226 -0.436729118694278 -1.43170192242013 0.255202828644703 0.0464398399229096 0.469908357627832 0.494045068785944 0.117352678033325 0.822213349908207 0.163906035653764 0.981698810047338 -1.07184391401338 -0.154703138679283 0 -0.568450374574102 -0.152471487121337 -0.360861635313851 -0.125984498241001 -0.679001708356522 -0.78993293089546 -0.844425320504157 3.05217989983505 1.41700390838822 -0.155498584992237 0.100915908990757 2.2333456338457 -0.484792666210048 0.00095460888932686 1.68205211534336 0.22379210612273
Rv2222c 1.37116945520764 0 -0.453521915176262 0.74814058937732 1.27445011814297 0.109072907362702 0.0206417016368628 -0.715495809087047 -1.93432408185775 0.143900962511843 -0.662750775046192 0.662659185407669 0.283481835043143 -1.34699883933195 1.18083394579174 -0.6126525475186 0.598255247967837 -0.0877126229107992 -0.485276139915758 0.216452558628998 -1.06462240162364 -0.0451347148889826 -0.457558657677442 0.193525950715329 -0.806757563175266 -1.25477899199137 -3.13779987505066 1.63107681456733 0.77506931915972 -0.197830752205566 0.320739208455695 2.10167395687202 -1.78088755839191 -0.605520953428826 1.63271939163601 0.40294456112669
Rv2801c 0.0264213982379238 0.129224941913432 -0.37476629956132 -0.177028357533311 0.595432665688887 -0.119132390195125 -0.429186922135115 -0.369585458521679 0.54384016312387 0.0496316486976533 0.469705191157564 0.311910802399048 0.141989927916107 -0.110294731354773 0.831676127630512 0.0954711479195872 1.31429250528911 -1.92606380380547 0.0305509006836295 0.321706087546718 1.60524293813763 -0.786955401282827 -0.611176098858108 -0.98791681360889 -0.264225359134493 -0.6555489941293 -1.49041652339805 0.824084999178419 0.133482301850693 -1.31108339268603 0.0503011948769094 1.05006466510264 -0.94370233793087 0.355504410620296 -0.0103686575241704 2.54377137025289
Rv2916c -0.328016145428022 0.217195570677152 -0.116610653403724 -0.414808363846796 1.05317760335200 0.456173356820647 0 0.117149009896932 -2.10969148689481 -0.0113533427914125 -0.0748402942594047 0.526297961624233 1.11307703522375 -0.860120780956115 0.442547856046278 -0.0609443122906831 1.19729105594532 -2.62543282719649 -0.0304596860986307 0.548827929240653 0.686988195639543 -0.347164477122967 -0.622053789954566 -1.25575387436442 -0.552756062090353 -0.743101036624871 -0.93299426124443 2.79288336974514 0.999680688171071 -2.51019004539570 -0.372361599102244 2.06242496900708 -0.0403404026788447 0.0446361664196263 0.101689875537233 0.300554581546264
Rv2971 0.597065780700125 0.137852611521796 0.768672303094009 -0.738025519326863 1.18026644590742 0.761699890108334 -0.632529941112863 0.295997551065975 -1.1762634348569 -0.527789718546649 0.565653760192801 0.468457747697467 0.993474418264149 -0.688890643921839 -0.202792093039104 -0.0321921159434943 1.01672102218299 -2.00422865558896 -0.25935337567094 0.740117505139011 0.547884893232671 0.661184718623523 0.732374906926091 -0.697330520887775 0.0407430182187901 0.103394604657620 -0.684564206426857 1.18836058125358 1.13471890069827 -1.35560070900536 -0.805299191209533 1.12627413083138 -1.18089511949216 -9.56742792686502e-06 -0.760301798914023 0.246946582890600
Rv3396c 1.36012373864465 0.0675324440274803 -0.350692582372383 -1.65745280869612 1.33789508960900 0.789941468100316 -0.0290714718005454 -1.19981818137055 -2.2856089106867 -0.356615798249917 -0.60233457310929 0.654462592929125 0.159832837817050 -0.400735834941334 1.39323507720264 0.0166345370558738 0.0901655682184957 -0.567475485078185 0.515000836038221 0.435645045062812 0.144075119129493 -0.469144917505208 -0.952749213128312 -0.38388829908898 -0.889570366039724 -0.98523187586368 -0.326658726926516 2.36793621247298 0.65180259054644 -1.58781318219756 -0.0696350835105447 1.80821165673180 -1.81725383539385 -0.253754631935859 1.76257655394460 1.09249891536387
Rv3709c 0.795873982563784 -0.440702500215389 -0.0051477019974991 -0.93823941685588 2.10884723642128 0.728566224356902 0.471359199737749 -0.661845596341704 -1.02367867943816 0.836066925305157 -0.0758264319345504 1.34408025827497 1.17805913622315 -2.45349911205301 1.57251653277683 0.0938648909313358 1.09365213513391 -0.488191087843796 -1.30013187863880 0.265562048085574 0.658413744340366 0.0175261212056292 -0.536586538781101 -0.243389057573940 -1.66510063672934 -0.977256173325763 -0.872165514496908 1.05628468175733 0.372391567109915 -1.17825988593663 0.814572467344645 -0.417578820213285 -1.74262383293693 -0.169885975035162 -0.22532034481784 1.29306842421669
Rv3878 -0.0886625100238922 -0.523983495296809 -0.166753258722945 0.60966565787092 1.02380235225729 1.37882793796045 -0.316054554153157 -0.280726026386561 -0.429789146047285 -0.338290398872202 0.85093078875005 1.12734545072286 1.10015248961008 -0.668608262041413 1.62687069285126 -0.34493010242318 1.48468782998737 -1.34555267601492 -0.569654949371112 0.637509125916423 -0.544638696198954 -0.192321687198397 0.0364366790689722 -0.917146998399994 -1.03976445563335 -1.25070499322558 -0.530057547289813 1.54780401693314 0.585776137180547 -0.148439186101038 -0.280744031278763 2.55793968775299 -0.258360730528925 0.119213382365839 -0.0350861698318524 0.440394549012745
[+] Show/hide bicluster #36 motif PSSM #1. bicluster 36 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0 0 1 0
2 0 0 0.666667 0.333333
3 1 0 0 0
4 0.333333 0.666667 0 0
5 0 0 1 0
6 0 0.666667 0 0.333333
7 1 0 0 0
8 0 0 1 0
9 1 0 0 0
10 0 0 1 0
11 0 0 0 1
12 0 1 0 0
13 1 0 0 0
14 1 0 0 0
15 0 1 0 0
16 0 0 1 0
17 0 0.333333 0.333333 0.333333
18 0.333333 0 0.666667 0
19 0 0.333333 0 0.666667
20 0.666667 0 0 0.333333
21 1 0 0 0 [+] Show/hide bicluster #36 motif PSSM #2. bicluster 36 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0.25 0.5 0.25 0
4 0 0 1 0
5 1 0 0 0
6 0 0.75 0 0.25
7 0 0.25 0.5 0.25
8 0 0 0 1
9 0 0.5 0.5 0
10 0.25 0 0.25 0.5
11 0.25 0 0.5 0.25
12 0 0 1 0
13 0.75 0 0.25 0
14 0 0 0 1
15 0.25 0.25 0.5 0
16 1 0 0 0
17 0 0.25 0.75 0
18 0 0.75 0.25 0
19 1 0 0 0
20 0 0 0.25 0.75
21 0.25 0.25 0.25 0.25
22 0 0 0 1
23 0 0 0.25 0.75 |