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[+] Show/hide bicluster #34 rows and columns.
bicluster 34
Mycobacterium tuberculosis H37Rv
19x35
[+] Show/hide bicluster #34 rows (genes).
bicluster 34 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #34 rows (short gene names).
bicluster 34 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #34 rows (long gene names).
bicluster 34 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #34 rows (NCBI RefSeq gene IDs).
bicluster 34 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
32
[+] Show/hide bicluster #34 gene upstream sequences.
bicluster 34 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #34 columns (arrays; conditions).
bicluster 34 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #34 ratios.
bicluster 34 ratios
Mycobacterium tuberculosis H37Rv
19x35
GENES Amp Antimycin ARP4 Ascididemin_Natural_product BZA DCCD Deferoxamine Dipyridyl DTNB Econazole EMB Eta GSNO GSNO_CFZ GSNO_KCN GSNO_menadione H2O2 INH KCN Levo menadione NaN3 Nigericin Palmitate pH5_2 pH5_6 Procept_6776 Procept_6778 PZA TLM TRZ Valinomycin Verapamil X5CL_PZA ZnSO4
ORF05723 0.309464657366004 0.603752667064257 -1.21028546000287 0.418946136629085 -1.09186862182380 -3.62775914886621 0.466569030645563 0.380953883858958 0.380783918878115 0.373547665437789 0.640510202654845 1.30361193172247 0.319495095592653 -0.115598387442243 -0.88697947464632 -0.0672391837431836 0.433438194750099 0.89192432037274 -2.05924969313992 -0.134933504255704 -0.45920854683013 -0.0289437418761031 -1.06649299942264 0.720947901051079 0.375794964087682 0.363067713793544 -1.32221495503562 -0.127670669053801 -0.543686230915445 0.928789827725508 -1.08958495620508 -1.02376575239730 0.422316704849257 -0.766703440697372 1.12985986901635
Rv0206c 1.30136653929175 -0.15485863213849 -1.24978541560318 -0.117832498254256 -1.1039584323338 -2.66009841566763 -0.278637231490892 0.00296633677456299 0.435612445277868 0.102137132076613 0.902351289199995 1.72081687437754 0.438900359525071 0.940847456468846 -0.350669148926691 0.18610510517439 -0.574939416673158 2.48750083423634 -1.76930221993814 0.445557445782873 -0.109067516892940 -0.348497268347235 0.175448977071429 0 0.177570911112976 0.0476466052978631 -0.424532261919134 -0.0167781185886382 -0.0657038154422623 1.41099821375284 -1.22954134584850 -1.35887849030994 0.5400062580283 0.836042484607233 0.798595892582153
Rv0501 0.323543208198525 0.480250759175503 -1.79727689609784 0.25262892523227 -0.549774288768971 -2.01344005896300 0.276759531962375 0.0803223327170593 -0.425425526582682 0.0112505919533846 0.30620370116199 0.180713298220661 -0.0238910906923457 -0.155641064759950 -1.29662947295859 -0.159846352174173 0.264995234816635 0.425143800145501 -1.76945580782474 -0.00672888766071312 -0.439177926957886 0 0.516031048078646 -0.342697637674274 0.478314060998642 0.892219910250809 -1.62682435036257 -0.863407452184943 -0.462613182988245 0.688925398490393 -1.00891741126378 -1.05416056441841 -0.230352628613457 -1.26263493677217 -0.0619927563750714
Rv0732 0.997225880952145 0.613812043195726 -1.06283122334733 -0.149000966487143 -0.232460878478638 -3.11021224826816 0.772840760446449 0.0141002072093719 0.730356681972905 0.265217487342437 0.327775988601659 0.934065656953856 0.74286909863547 -0.545290955581015 -0.894712097475392 -0.193956803466126 0 1.21891969725651 -2.23255556921053 0.900091633282128 -0.0852859045747105 -0.465586859629065 -0.092144533036029 0.0403197946644887 0.155809174487185 0.465896785382989 -1.29702554519352 -0.0223561841411065 -0.119646682483907 0.805151532698685 -2.02230108072731 -1.23925906634294 -0.152745574457561 0.00571023837728872 1.18124371741197
Rv1192 0.624833836694865 -0.0929932446175735 -1.61879175647841 0.291195778578655 -0.458975433634175 -3.13328708479863 0.040831688239363 0.144947502818469 -0.0701402954795148 -0.149534551929445 0.747017337588718 1.78063594190205 0.133399103852814 0.0265033192443184 0.818806944876672 -0.715469878120161 -0.234731775515551 1.91096024689903 -1.68389480568005 0.696689645840883 -0.518312641625219 -0.160868677359683 1.27972369361551 -0.621574545804537 0.512787004132791 0.500254088622497 0.455905783256947 -0.470035090772044 -0.292647171928012 1.14728330204142 -1.07060974027387 -1.00200111229285 -0.272785251133673 -0.418701703486116 0
Rv1871c 0.801559597766961 0.115071681267855 -1.02869630538250 0.199212359005896 -1.28301452723793 -1.95633106242705 0.228982331521391 0 0.158818813222736 0.486414067671006 0.443363163186932 0.828202542045045 0.127501998062338 -0.0859115297271551 -0.501521045639139 -0.619359240261618 -1.64842550491156 1.52871463194894 -1.10838170140384 0.748088308130533 -0.712327158908036 -0.556406701012594 0.692120649052773 0.47311902332723 0.126288391315685 -0.0960606371533486 -0.755560051972176 0.135788433461767 -0.66547291400051 0.316111079603994 -1.20850226802282 -2.80841873754760 0.181763644866996 0.169066082295530 0.0946361976272546
Rv1872c 0.589033303505410 0.370813174784970 -1.32050355844918 0.477270441008075 -1.32004962573281 -2.87036225376871 0.0336309089119288 0.23907176977624 0.157540874248398 0.210080828722319 -0.0187917598784601 0.202003502264017 0.0267901810400877 0.459752075513558 -0.0306230941799518 -0.374790235685332 -1.78579704275237 0.363105165330578 -0.78455323278133 0.874418128776035 -0.506023324144919 0.0716338041886088 0.859953140058636 0.098535874467297 0.00890793692493787 -0.00270370958823269 -0.414903214605737 0.199818164226605 -0.119392440445009 0.0625560044966274 -1.09586055626154 -1.62402953817745 0.467122279530002 0.702471821661118 0.965247854944701
Rv2199c 0.95009448817295 0.496311983230273 -0.706614735310641 0.389273711239914 -1.52105415137944 -2.70962156931461 0.529516166169564 0.112430424573777 0.0963319431642875 0.829814010648424 0.368493075946522 1.34484687063945 0.181281564882164 -0.0130187069386586 0.566242528869826 -0.427952271107704 -1.05747304581052 1.63580098933924 -0.446821475305082 -0.623278494389093 0.0323770554959740 0.401123783814357 0.613039136310396 0.600536084629393 0.0829210486512709 0.0362395969582049 -0.58228428718692 0.424728007174046 -0.912602308613713 0.710449768354681 -1.59325014096662 -2.15574305210077 0.101891966869990 -0.0962849153095565 0.942806084440439
Rv2200c 0.767873291891226 0.774769377151255 -1.19273772633971 0.411675317284821 -1.59719002980918 -3.37680265343890 0.375600459017516 0.577172201784095 0.3252968961984 0.837624915527127 0.765245541274755 0.71110679304215 0.649735887383622 0.392584614243184 0.66064542616781 -0.064590000506587 -0.346830484385474 0.392102147987971 -0.978808132682106 -0.311638929042345 -0.294222046128698 0.412208981640101 0.913784420889327 0.145272304622365 0.572215581826093 0.803829690031823 -1.13493279934323 -0.431855751959448 -1.41977851533204 0.674852603743526 -1.80163228610969 -1.38934687276928 0.446003075090918 -1.40419158856408 1.29278684470007
Rv2376c -0.00558760062086775 0.180832875862482 -1.81321898880495 0.000276490723772762 -1.39921584989995 -2.99119703506817 0.0379059186387428 0.397858684809432 0.696017702428567 -0.0539493498289418 0.431259907454963 0.8301502930893 0.599540550193357 0.518466842375767 0 -0.0633337034488496 -1.04643005414582 0.564463722207774 -1.27738609582845 1.03041886350188 0.222773462841906 0.356207288327707 0.758098501993476 0.61586896315098 0.0586092258882852 0.137000345887659 -1.35167072034859 0.0192494479226037 -0.473507286901251 0.819118175298202 -2.00138399123450 -2.1488840745036 0.409783189436273 -0.368997985321991 1.33161985325367
Rv2588c 0.737577491632792 -0.229675644736444 -1.75830977886504 0.0751960169843529 -0.82767452184324 -3.46815271163604 -0.0835211147171079 -0.312335748441929 0.345366748573995 0.12824621575001 0.187978597011016 0.283704852192756 0.289579823654486 0.000546083867649752 0.178618699701326 0.762882049469169 -0.668780644759494 -0.304368002835803 -1.11815605308362 0.39915119931219 0.692081621596827 -0.0435310128847261 0.287722968731819 -0.311021651251908 0.312071709913514 0.203742363293477 -1.19628058591614 -0.47956087098319 -1.09771328985047 0.676069957688443 -1.38146948406769 -1.424791159538 1.18101593761144 -0.942773278195692 0.270435471254134
Rv3219 0.160287184503974 0 -0.0982112871554402 0.522206822424312 -1.01278841965737 -2.78652338590215 0.228382958299897 0.769908684649575 -0.0881810060924632 0.209037658943971 0.255029412440373 1.29797753561239 0.196454742324032 -0.00248103552305953 0.226722718408066 -0.293503362474592 -0.43938606179066 1.58368284632651 -1.25548460817719 -0.308434161309815 -0.0770774713968098 0.294962821892450 0.494287104320209 -0.34752096952263 0.809168067720694 0.729314526221845 0.268572997555352 -0.214824248367045 -0.356541416253099 0.460261947111625 -2.20041107039086 -0.0221860416947419 -0.318334376617253 -0.996087836810597 0.549833420836768
Rv3584 0.110367583893705 0.36214186377296 -1.35520178834215 0.372403151681661 -1.19942978135106 -3.67574416237583 0.213183915644199 0.350850275423881 -0.107955971262212 0.455992233401214 0.329156259238724 0.782847013532027 0.460871143094884 0.258090476930033 -0.672775507354255 -0.307276812531903 -0.844441905774805 0.789847689989443 -1.70256192540539 0.648230040829042 -0.298985989513506 -0.113610598389193 0.925593194895063 0.202519353727029 0.232208368027963 0.426035417404352 -1.70787384340069 -0.585119943016669 -0.840637719268216 0.349595313581282 -1.97783199093067 -1.41039066241119 -0.343258505350516 -0.798587162409543 1.08586461351437
Rv3682 1.27249414871185 0.205408897476896 -1.59439435972903 0.155661608117772 -1.37699864371417 -3.03538253214472 -0.0154890968780747 -0.380582422035792 -0.230013433308935 1.02231145288444 0.608777394868293 1.41627268721739 0.209294634434159 0.90666670793609 0.324408093752206 0.307579560236752 -0.608548868777156 1.16749872289198 -1.19909165777506 0.500680610159379 0.171686345580095 0.0755736792439386 0.280164670429407 -0.396822080459984 -0.405242263204665 -0.262147034083724 0.265698524809768 -0.35986156053482 -1.10859986346206 1.14914358699103 -0.707265257305776 -1.76901718418854 0.159338540503006 -0.423678118106692 1.08261056829781
Rv3686c 0.659682900808348 0.242598553118653 -0.953248603471526 0.104885861935759 -0.911254009956263 -2.58111372406668 0.417655798743649 -0.0058719446494504 0.368712216323537 0.127908103643809 0.568051829457077 0.665955410602418 0.235590918910369 -0.0889329382563797 -1.33322882482217 -0.800034600230304 -0.319167853100784 0.78067059200334 -1.70216610633674 -0.0358484979897362 -0.645295140832183 -0.671766956996878 0.472889017973786 0.633407350331027 -0.00700420941340509 0.285743806743725 -1.29940147287628 -0.319177440093200 -0.383577998787127 0.144561998076922 -1.49362944278205 -0.809710069555333 0.847729517442378 -0.866482320431842 0.318697516631707
Rv3753c 0.657330913805618 -0.181654285023292 -0.589328155885261 0.376187598178228 -0.572643920249548 -2.82316899952992 0.188765207087961 0.705959507231654 0.250173427183759 -0.429172298538721 0.328603746257322 0.811669124902094 0.598790802627034 0.71664272810935 -1.28959660339250 0.00355989558222214 -0.605503252197517 1.07621385535421 -3.11502418421447 0.821225398578807 0.605390233783853 -0.657062223206942 1.38403322011781 0.328921620612465 -0.0530972002409659 -0.203559012031899 -1.06729353094270 -0.478935308537642 0.209279924304454 0.393493954141854 -0.713777626476817 -0.571942154678255 0.126440974728991 0.252092535151045 0.701588453240236
Rv3803c 0.448215563436361 0.415222256449459 -1.35493112605907 -0.12729140903206 0 -3.21612722086143 0.0737468969151053 0.155889336925748 0.247198701762562 -0.445096834348266 0.464033158654025 0.671314901057206 0.3686843956756 -0.226105601594957 -0.896537209928684 -0.448434255505983 0.432030242261444 1.06533181022235 -2.04040940964745 -0.0386624194320999 -0.0317943338121409 -0.979085531862175 0.768891185918065 -0.00172909421195332 0.256678689998894 0.366115024004527 -1.27200677709000 -0.299181989378462 0.349134773098254 0.769348893201857 -1.41278849510054 -0.527257697812956 -0.0902601471958205 -0.0806986333497353 0.432337604452348
Rv3804c 0.661564542354155 0.359941047199984 -1.75616518914747 0.313579716545664 -1.40149440306241 -2.98295443523877 0.573084337972868 0.554328102764204 0.237873171324442 0.0220280686147849 0.455644810982568 0.642113903343486 0.531667659922898 -0.230834032653268 -0.297374146051766 -0.0998542488837395 -0.67015760132526 0.838263649843063 -1.81995345427065 -0.0113780457995459 -0.0596383411506713 -0.341521492730215 0.175309693771253 -0.0221233551249639 -0.0143978732529414 -0.00979965484510787 -0.669869979093134 -0.198439647393007 -0.405603047011319 0.297413655901032 -2.20345725693154 -0.347970244750412 0.291828221611 0.0415512589549553 0.628215246358561
Rv3888c 1.23207209283962 -0.169987541911978 -0.0359969862247495 0.402663469975173 -0.301885028941568 -1.66624086779213 -0.04055518840272 0.427064495103362 -0.101635380400757 0.0246690447591843 0.702984627019127 0.696735126617892 0.685512522262651 1.05485468520259 -0.358023673189323 -0.479612416803159 -0.0283207567061645 0.799266560397684 -1.78867058366241 -0.213640361246461 -0.141724727553180 -0.155629605406467 -0.167582949769707 -0.435060495765198 0.0453197029608941 0.548516851972307 -0.384429611214161 0.277832556485076 -1.36233918704103 1.08439548062821 -0.611378746968917 -2.17094583389665 -0.110966249336508 -0.278675520652904 0.551596186593478
[+] Show/hide bicluster #34 motif PSSM #1. bicluster 34 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.4375 0.5625 0 0
2 0.0625 0.3125 0.625 0
3 0.3125 0.6875 0 0
4 0.0625 0 0.0625 0.875
5 0.4375 0.0625 0.5 0
6 0.0625 0.125 0 0.8125
7 0.0625 0.375 0.0625 0.5
8 0 0.0625 0 0.9375
9 0 0.25 0.75 0
10 0.625 0.375 0 0
11 0.0625 0 0.8125 0.125 [+] Show/hide bicluster #34 motif PSSM #2. bicluster 34 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 1 0 0 0
4 1 0 0 0
5 0 0 1 0
6 0 0 1 0
7 0 0 0 1
8 0 0 0 1 |