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[+] Show/hide bicluster #29 rows and columns.
bicluster 29
Mycobacterium tuberculosis H37Rv
21x36
[+] Show/hide bicluster #29 rows (genes).
bicluster 29 genes
Mycobacterium tuberculosis H37Rv
21
[+] Show/hide bicluster #29 rows (short gene names).
bicluster 29 short names
Mycobacterium tuberculosis H37Rv
21
short_name
[+] Show/hide bicluster #29 rows (long gene names).
bicluster 29 long names
Mycobacterium tuberculosis H37Rv
21
long_name
[+] Show/hide bicluster #29 rows (NCBI RefSeq gene IDs).
bicluster 29 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #29 gene upstream sequences.
bicluster 29 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #29 columns (arrays; conditions).
bicluster 29 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #29 ratios.
bicluster 29 ratios
Mycobacterium tuberculosis H37Rv
21x36
GENES Antimycin CCCP Cerulenin CPZ DCCD Deferoxamine DIPED DNP DTNB DTT EMB Eta GSNO GSNO_KCN INH KCN Levo mercaptoethanol methoxatin Mtm Novobiocin NRP_1 Oflox PA_21 PA824 pH5_6 Procept_6776 PZA Rif Tet TLM UV Valinomycin X_109 X_111891 X_124196
ORF05589 -0.232382565135518 2.64188166134045 -0.780154927157104 -0.091376555761122 3.35813175426012 -0.239969301376283 -0.69415180399605 2.73419925154098 -0.92123916417947 0.171890466268135 -0.110516536588475 -0.0078438541504154 -0.641845384528146 0.7390401115342 0.485203509903801 2.13132570627646 -1.25395641323928 -0.756213265365511 -0.638996724512096 -0.393939249292753 1.05137092336004 0.53829397645192 -0.569347972761306 -0.416838354119877 2.09376397812725 -0.455988250226606 0.493858059555413 0.66314572980671 -1.01400244014160 0.247822514099793 -0.440364292375568 0.0238618081495011 1.74480432495914 0.194208572376770 -0.754822899096218 -0.726634615319651
ORFD0179 -0.0951021280211922 0.808245445571405 -0.122905183751006 -0.265450189679356 2.87496100535365 1.34822104411906 -0.891037938068843 1.03982643815785 -0.278533764468686 0.245407708086305 -0.442446196779076 -0.0187918762881069 0.545182722925608 1.39258067214311 0.0155789443970460 2.77466222211127 -0.0683135898893651 -0.274886024230155 -0.147314548454474 -0.523831885747141 0.218654639517401 0.300829361076053 -0.417188477585299 -0.160833073106768 -0.0507511214797912 -0.599360935081426 0.0518768871977965 0.0506454313309572 -0.4835078809673 0.424290580130027 0.0093440438145728 -0.406963168955435 2.48335261527035 -0.0295862635644674 -0.375280258676424 -0.324414723913178
Rv0758 -0.781436873277163 3.0059810494291 -0.44986942200375 1.22551044451894 3.46619257421743 -0.147037905539873 -0.237686438794408 2.60066389982351 0 -0.102596538087392 -0.423801165612883 -0.353724828460026 -0.213874180501206 1.05745691985161 -0.659234745476879 1.84589923725254 -0.464451605153446 0.303136012333728 0.0902040671934791 0.165861305996669 0.0840312301691121 0.798248387253982 -0.0756555171801235 -0.505737019526776 0.992090526418968 -0.0286640425133161 1.25388422585495 -0.208148679282318 -1.4807949107268 -0.139753219744358 -0.592510898091493 0.265008676237894 1.56398807155605 -0.660797630425163 -0.328589329559753 -0.602882528947545
Rv1102c -1.02476814587088 1.48298486720656 0.777989334918518 0.160704442854937 3.04703040124917 -0.298360216902542 0.030030943379001 1.64915252874539 0.0332185846874374 0.8093128178193 -0.131987648596149 -0.453615207887685 -0.155752270619839 0.914668392892145 -0.921317578557931 1.61705871421254 -0.819078086469296 -0.358556564248256 0.178793134417970 0.152409772373665 -0.0851861791598455 0.354805534599422 -0.937831808111634 0.0302332403292548 0.711142795310814 -0.484367233012934 1.25770733115743 -0.858176375130952 -1.41800419809838 0.729230139190408 -0.463594128248654 -0.251160079817558 2.09566195404035 -0.360464005171167 0 0.136242561861841
Rv1397c -0.521548929589637 1.85340758910644 0.0337147847471304 0.833344896975254 2.28750584043968 -0.0849101732591764 -0.683010262157924 1.77692598250212 -0.153300386011813 -0.350975271710439 -0.209282019756123 -0.276086919733541 -0.208271843012221 1.12010179319177 -0.368255047506770 2.57537213248205 -0.00870128959826772 -0.0965369177379133 -0.0039900421653318 -0.772986872475188 1.31146681848624 -0.312064888745130 -0.587951988244738 0.0392419514328429 1.45996793120567 -0.766608263890248 1.21563694900779 -0.105843262866683 -2.79425561032045 0.222833559997394 -0.246255236065362 -0.108019125972932 2.90408143696313 -0.258128056749211 0.196354709336150 0.110613879893291
Rv1460 -0.3645537706084 1.47519149111474 0.125098085881317 -0.00470697678653803 3.08175977587792 0.0902293981816461 -0.400600491044056 2.09930076218423 -0.556477515285787 0.555284179288025 -0.302529357992007 -0.201716903861037 0.0106194557144053 2.18619888503498 -0.400357742227229 3.20667179634064 -0.202158749806598 -0.0173196663703251 -0.0157321107698676 -0.398490875470832 -0.257208797010934 0.294339825692741 -0.257527625989762 -0.204073258602664 1.36608140752908 0.0606040189988559 0.891538572727206 1.85940830494257 -0.762349467186785 1.32622302343826 -0.166346861393028 -0.324914710098257 1.31032937686817 -0.622160711422792 -0.547986677245902 -0.483843335246074
Rv1461 -0.487946246351783 1.88653890337693 -0.159739311089071 0.0912597381355649 3.59924817347484 0.0664005868257365 -0.47924804200876 2.18205908533543 -0.77724675916624 0.68530799406558 -0.0298328876400407 0.196085375967898 -0.134250946399325 1.30287791998273 0.196085375967898 2.26136250989432 0.196085375967898 -0.184754247446749 -0.567343757831605 -0.366510841103849 -0.279440751501438 -0.555504413958467 0.196085375967898 -0.327960844844357 0.122248265963122 -0.106916254776495 0.495615823795573 0.925827108866261 -1.30167672045426 0.196085375967898 0.196085375967898 -0.48030734534553 -0.0319334485325132 -0.584856578952265 -0.714714162009241 -0.746610961710702
Rv1992c -0.530475747142089 1.56377691038056 -0.500610315348051 0.0842161729712282 2.665102153766 -0.409351617469798 -0.405078864398962 1.54598121625030 -0.245566369346202 1.26960479544191 -0.54100203044965 -0.207661188388397 -0.240531060220234 1.39507710070643 -0.552168343522173 2.25404022519287 -0.590217112890131 -0.179424827001484 -0.137099058985458 0.119938591763198 0.143593974225790 0.133439914513488 -0.590229462470552 -0.689569869076922 0.944578237512356 0.119938591763198 1.05423345667480 0.119938591763198 0.248183003767807 0.78277331615049 -0.335413182139769 0.119938591763198 1.97097803010847 -0.056214862574933 -0.447889459231516 0.656636849054984
Rv1994c 0.201249254671385 2.37659114355261 -0.463759364639212 0.247201811838628 2.68426661397535 -0.235601581084843 -0.863373721967539 1.53660102708649 -0.727557708161932 0.835019494629899 -0.571779261588251 -0.642984781840686 -0.475121351462882 0.818342864777836 -0.88440470434943 1.43576604322501 -0.593745684988463 -0.476249887847799 -0.725644297184772 -0.173050748147614 0.422470547062409 -0.462771778747156 -0.452907592323603 0.242688276279773 0.483746110783281 0.0394197994258869 0.156989404244987 0.805177996299082 -0.74543234332675 0.303665373693091 -0.171184127990010 -0.255677770782145 1.03357305140826 -0.666821687944766 -0.0103111246567807 0.38145351437381
Rv2117 0.193052044056262 1.00001568291540 0 -0.202744914983026 2.42973839609429 -0.541070045314387 -0.562950804081336 1.36567334965341 -0.745620046569338 -0.135675250828623 -0.296842408098478 0.0371140849128178 0.154209512068369 1.13885901393929 0.769482894811802 3.43148943399453 -0.554180574321648 -0.747460031914245 -0.224909355970581 -1.10061991612670 0.755327477593711 0.0190990560293517 0.0696600558884572 0.242741770550634 1.16698573794697 -2.03979327173116 0.336294978152770 -0.450210276638593 -1.52417692111683 1.50085890461210 0.102696835366683 0.257849145923190 2.18536620746053 -0.0620197083732591 -0.510679850565189 -0.671545359498502
Rv2158c -0.115861842674753 1.48895825652425 0 -0.253944616275646 2.44161894300569 -0.100492558571006 -1.02919839168681 1.88240942818012 -0.07849840700512 1.78306401831556 -0.375141258636507 0.0681246148433419 0.41227617205952 0.256707818165374 0.408001796964262 3.44246328333629 -0.455971235753850 0.214687690950851 -0.31181274595351 -0.373895182028627 -0.335740524892576 0.751178816880978 -0.408298273872817 -0.043854050743708 2.23914762726478 -0.0333677385543498 1.71249950461600 0.300845615584614 -0.207806111845747 0.406630930886283 -0.298370660837268 -0.526741888741555 1.65136632443796 -0.204446106270050 -0.254476265855444 -0.345517550374877
Rv2304c -0.423022886114415 0.499696182480803 0.0456766392953586 0.137844791253802 2.20888635315228 -0.195438240002800 -1.23643328019506 0.680832935560653 0.196937641689583 0.480222443276103 -0.76184904366359 -0.156724284084257 -0.00751362313903369 1.61228761535174 -0.235978722965339 3.35435991537372 -0.454339664315225 0.268456093685936 0.269218060061348 -1.08226005623720 -0.83707563665598 1.19884669299574 -0.715099161060516 -0.36541123512517 1.82975946971285 -0.828359437144085 1.34447109861912 -0.184546014502726 -1.44198860670771 1.72446314831481 -0.559133729987723 -0.835690931297022 2.26231758210268 -0.670336016405344 -0.552258147875795 -0.617627450275111
Rv2618 -0.0747137258041605 0.668475288071393 -0.494933951291425 0.6111357292921 1.82577027667188 -0.225004728508491 -0.921181493318694 2.77091957344355 -0.210972515230458 0.593524714779696 0 -1.38224961424216 0.0861373771071651 0.748582013932263 -0.138062789667561 1.56412991246051 0.133361787644631 -0.148310274782907 -0.0868499197524623 -0.263287021021599 0.219314746198238 0.715364478888478 -0.480137211987633 0.213550094674794 2.19871787995324 -0.129868361729516 0.114000697688065 0.0502075174058973 0.485162730830301 0.143586709801719 -0.350823357101447 -0.117443707673576 0.965989081616203 -0.517221266852708 -0.196201256886488 -0.126747096943070
Rv2688c -0.996734346560003 2.06578839523138 -0.471541775653488 1.11923765978858 4.02832818710019 -0.251227153680092 -0.595344873607913 2.05677923418045 0.0978563483410106 1.00738788986988 -0.573081415635229 -0.319804600583324 -0.151346697383144 2.02133862841769 -0.370516179955602 2.45346156776263 -0.665813051904438 -0.109337716477229 -0.193228389716479 -0.562765366050351 0.615804809491956 0.458826873498462 -0.866619437275555 -0.651489284224929 1.73808234338945 -0.207174040173645 1.06820089988182 -0.0218120934668438 -1.15377855862716 0.163016681367620 -0.603726457431475 -0.560378088732526 1.78765048292468 -0.48489049407267 -0.393503565669631 -0.2918995106021
Rv2694c -0.885494409753072 0.783660689550546 -0.493057799902812 1.72463539182147 3.72771918489549 -0.653951145902592 -0.522130995207439 1.02645119547598 -0.536724497116310 -0.0279104490903672 -0.331073837970154 -0.32638754188182 -0.707523046364796 0.314246648593391 -0.107390351678309 2.39142274162193 -0.911965529187734 -0.84629045564451 -0.727755706912584 -0.262867936528757 -0.48556267771676 0.984460455339672 -0.384189561993153 -0.703681472770195 1.21129458435908 -0.353291313426592 0.256072021721323 1.44619789987348 -0.551332888735735 0.199745597841553 -0.708257499007637 -0.299259342111963 1.19718135100652 -0.451214121573865 -0.748077431253557 -0.469599885512977
Rv2710 -1.19126945519688 0.873541421546906 -0.379005226689704 1.36151473104383 2.25761855701411 -1.10845565894817 -0.650339749510195 1.11680093774315 -0.867331605164023 0.336623795833305 0.237321272101623 0 -0.754456881830225 0.623995527584822 -0.145032450033748 1.09966206628905 -1.33423806128581 -1.03310930162884 -0.686225346684776 -0.759355403668416 -0.890563242540122 0.289710594002345 -0.688286719715291 -0.491963231684602 0.442971847431192 -0.358422175726158 0.693099510719515 0.972526698579696 -1.97866549988732 -0.0660199885749375 -0.352999018883746 -0.902248842000495 1.15522376930001 0.0248269946645496 -0.952809040509122 -0.549229502482755
Rv2711 -0.885594312069773 0.585874767484557 -0.23817980135266 1.47821542108603 2.99833927218414 -0.888742113563039 -0.682083273269732 1.25692863084457 -0.60987026863276 0.708024567378522 -0.307587275700352 -0.340237198657844 -0.512777751672165 1.56997197676565 -1.10456662824832 1.8431083449034 -0.936069977345205 -0.659731273917791 -0.183786257494348 -1.08477399389133 0 0.643333999119703 -0.234363338326952 -0.139371017329206 1.40231118091488 -0.296503744667218 0.812234302815456 -0.366635306514597 -2.04450460232996 0.263359610645328 0.101972401912093 -0.643200838224608 1.95690718886355 -0.306567126991495 -0.686086678327692 -0.275232084488509
Rv3173c -0.555262618212131 0.469727731252888 -0.48794052281542 0.60453198591229 2.57199856067946 -0.164673913804606 0.0846199406482361 2.15165645714846 -0.344859239356092 -0.0582677169010887 -0.71627086170841 -0.163737666196291 -0.12832315288348 1.25597479823597 -0.11932098462643 2.36088782933192 -0.160277471931438 -9.69588462397388e-06 -0.801549769548402 0.069636971673223 -0.114762807020754 -0.194430790786944 -0.0421151284577073 0.0284658618853452 1.97993355992354 -0.716338202280226 2.09289192293100 2.27722615880970 -0.731860121725878 0.89778906725952 0.0236553136154770 0.0170191459250213 2.03500989657836 -0.221212941894333 -0.147509519033526 -0.0782458936275397
Rv3526 -0.194102356515442 0.977638562641275 -0.461341319538564 0.740645179910062 1.8006850302438 -0.300900368808469 -0.561311339789732 1.2698315016609 -0.312571725619905 0.657896700334876 -0.335721421722911 -0.181469860327863 -0.121798268328124 0.645226342599426 -0.302257180181093 0.918093256895816 -0.621200190576582 -0.294547174205657 -0.1980231406292 -0.831822706860261 -0.122558940364157 -0.419762022087011 -0.431020517243617 -0.130114712668660 1.07848723442137 -0.242980538798002 0.203401389178443 0.623365856348259 -1.55560538264659 0.891547590189919 -0.361785297478571 -1.06502110395335 2.02684936273679 -0.505126197095226 -0.58446697033119 -0.763005757888417
Rv3527 -0.354507563696643 0.476549721373829 -0.171342052357319 1.18617001017117 1.46810290202184 -0.471475156944534 -0.2067833059175 0.785716247102088 -0.424294930712581 0.349453806303241 -0.387491015620831 -0.40325575409187 0.135976695815471 0.942346804502137 -0.578605760391424 1.21580662385581 -0.308110840102229 -0.331674423379534 -0.187877247319116 -0.524379031117129 -0.137615690729262 -0.00599906433365255 -0.148393360625468 0 1.86491198253031 -0.670483939817936 0.696232547974271 0.671161806734784 -1.21319595676625 1.18209225491434 -0.0400010003737485 -0.0554833863741072 1.91995422526659 -0.431447029970857 -0.410479255205958 -0.582355568702219
Rv3570c 0.272639064199539 0.494493349394784 0.223908865281015 0.0279075156072834 1.83338771013802 -0.407207962374839 -0.677674518443146 0.806213661645342 0.174694141566274 0.471723838227759 -0.65909695302966 -0.655444751345458 -0.159736158282521 1.78607432021353 -0.987694610383512 2.38193447882635 0 -0.681642468749079 -0.256156411991528 -0.556435226726935 0.585928310171668 -0.518045805383041 -0.863420463405795 -0.0760692107794522 1.16330955183615 -0.79813482548821 0.613837175126745 1.03235726722544 -1.75887977769779 0.265709722572914 -0.8044980661979 -0.290807282057940 2.82526651185802 -0.928444966625161 -0.315600157573145 -0.353890986158913
[+] Show/hide bicluster #29 motif PSSM #1. bicluster 29 motif PSSM #1 Mycobacterium tuberculosis H37Rv 22x4
POSITION A C G T
1 0.4 0 0 0.6
2 0.6 0.2 0 0.2
3 0.4 0.2 0.2 0.2
4 0.8 0 0 0.2
5 0 0.8 0.2 0
6 0 0.2 0 0.8
7 0.2 0 0.8 0
8 0.2 0 0 0.8
9 0.8 0 0 0.2
10 0.4 0 0 0.6
11 0 0.6 0.4 0
12 0.2 0 0.8 0
13 0 0 0 1
14 0 0.2 0.8 0
15 0.2 0 0 0.8
16 0.6 0 0 0.4
17 0 0.8 0.2 0
18 0 0 0 1
19 0.6 0 0.2 0.2
20 0 0 0.4 0.6
21 0 0 0.2 0.8
22 0 0 0 1 [+] Show/hide bicluster #29 motif PSSM #2. bicluster 29 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0 0.2 0.8 0
2 0 0.6 0 0.4
3 0 0.2 0.2 0.6
4 0 0 0 1
5 0 0 0 1
6 0.2 0.4 0.4 0
7 0.2 0 0 0.8
8 0.2 0.4 0.4 0
9 0 0.4 0.6 0
10 0.2 0 0.2 0.6
11 0.4 0.2 0.2 0.2
12 0.2 0 0 0.8
13 0.4 0 0 0.6
14 0.8 0 0 0.2
15 0 1 0 0
16 0.2 0.4 0.2 0.2
17 0.2 0.8 0 0
18 0.2 0.6 0 0.2
19 1 0 0 0
20 0.6 0 0 0.4
21 0 0 1 0
22 0.4 0 0 0.6
23 0 0.8 0 0.2 |