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[+] Show/hide bicluster #25 rows and columns.
bicluster 25
Mycobacterium tuberculosis H37Rv
22x36
[+] Show/hide bicluster #25 rows (genes).
bicluster 25 genes
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #25 rows (short gene names).
bicluster 25 short names
Mycobacterium tuberculosis H37Rv
22
short_name
[+] Show/hide bicluster #25 rows (long gene names).
bicluster 25 long names
Mycobacterium tuberculosis H37Rv
22
long_name
[+] Show/hide bicluster #25 rows (NCBI RefSeq gene IDs).
bicluster 25 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
40
[+] Show/hide bicluster #25 gene upstream sequences.
bicluster 25 upstream sequences
Mycobacterium tuberculosis H37Rv
20
upstream
[+] Show/hide bicluster #25 columns (arrays; conditions).
bicluster 25 arrays
Mycobacterium tuberculosis H37Rv
36
[+] Show/hide bicluster #25 ratios.
bicluster 25 ratios
Mycobacterium tuberculosis H37Rv
22x36
GENES Amikacin Antimycin ARP4 Ascididemin_Natural_product CCCP DCCD Deferoxamine Dipyridyl DNP EMB Eta GSNO_CFZ GSNO_KCN KCN menadione mercaptoethanol Mtm NRP_1 PA_1 PA_21 PA824 pH5_6 Procept_6776 Procept_6778 Rox starvation Tet TLM TRC UV Valinomycin X_109 X_121940 X_124196 X_241 X_59
ORF01755 -0.307919170394336 0.744445260377593 -0.333669136509601 0.937871345393616 -0.134176606478728 -2.43213130158728 0.617072295415906 0.97642153934945 -1.13903185764141 0.295679410770482 0.676890390069125 0.815303951858457 -0.71785986709919 -2.91296554062856 -0.283897983035542 0.009354558122619 1.16166132026975 -0.692895174863646 0.632861734800925 0.351956877767576 -2.15532015231162 1.19272727446799 -0.62796356265059 -0.0731432566771925 -0.657359851804396 1.47330336100541 -0.440481257081732 -0.0396460047697380 -1.17531552781892 1.26511882213941 -2.00751401431201 -0.413581889631147 0.0550831467254454 0.963563149724655 -0.590472938436624 -0.113496732182433
ORF08410 -0.0226014067341251 -0.929134855989234 -0.609968951260259 0.623864397888536 0.0199007194996116 -2.12686255123702 -0.354298532357371 -0.522778386941892 -0.862010543623053 0 0.321040065540718 0.618647945805185 -0.277556314702397 -2.26560485849498 -0.923121260344765 -0.00527017373566909 -0.0629670031739816 -0.897788326189058 0.552845861093184 0.153392682056898 -1.50422464334800 0.41533642089361 0.313524348245168 0.172673800780878 -0.708475116485567 0.276705160488224 0.205825788748838 -0.263750088650178 -0.560725176039526 0.492734336412269 -1.72381702696285 0.667464561135732 -0.270953426394367 0.0850266970711454 0.93156673557405 0.971359939172455
Rv0072 -0.197150029038467 0.0657496921718874 -0.435003742841387 -0.508717777721849 -1.18859720559847 -2.91663284857470 0.709522352991042 -0.0940708129366607 -2.12317926253352 1.02447321822049 0.169806752088919 0.0510833010870585 -2.60102790907501 -3.72232188594128 0.307550196426775 -0.00213714365511583 1.00457186959032 0.056814387525678 0.103359403385264 0.538380209320821 -1.82340693520469 0.448707085068350 -2.11085428965155 -0.588564987883354 -0.699315960855024 0.850056116127244 0.209600886053337 0.485206102639087 0.755885056877358 0.972692710165171 -2.80923410180208 0.981209586748236 -0.144795014374563 0.638384666266815 0.351211673827069 0.398411417982920
Rv0231 0.402184038113279 0.645038930577615 -1.43689926685858 0.0886749147953448 -1.61876709629129 -3.03494088828175 0.571302468123776 0.394977970127487 -1.94317484273004 0.391377706363081 -0.0246414556634392 -0.371430168220028 -1.89846937537940 -3.3453134008142 -0.776765346029157 0.909564962758616 0.166549221965254 -0.266347645869607 0 0.330027778893393 -2.40239914745679 0.38510903141484 -2.48151025093959 -0.585713206868055 -0.119152935961286 0.753780749546041 -0.0772034397478028 -0.181936828798813 -1.11888256431 0.213595596053628 -2.02703301696419 0.265272014092258 -0.113007330822224 -0.0764914127136282 -0.635767104840953 -0.126806254153531
Rv0679c -0.729532883795325 0.250970543394589 -0.602940934878436 0.660952918866537 -0.523978288257673 -2.91768041607083 0.243854468646852 0.700905633005225 -0.0374856748847477 0.0219440278357341 0.0482888922521208 1.4826801860735 -0.44851540982481 -2.69593508015727 -0.0976486941720999 0.0242934796035261 -0.122223841187921 -1.65834111279413 -0.380319780644163 -0.554068644041151 -1.24940829927170 0.325423908386298 -1.90780840282359 -0.778693947708621 -0.141388228851810 1.24317561709811 -1.20921702248752 0.00356413946546579 0.65930123339904 -0.672628330940481 -3.23598767028229 -0.111123463317853 0.07640310205054 0.309422090873249 -0.0325291380899249 -0.211214202366011
Rv0831c 0.0919400270775998 0.539264851651679 -1.36988784070537 0.0768250498313908 -1.28245217029517 -3.90144564511601 0.486741284718287 0.114889029250165 -2.20038816877786 -0.307923680445252 0.269414956132424 0.166560074186230 0.263687845643013 -3.39306566412691 0.199630551909719 0.84780960791027 0.0958605392883022 0.0334840189907555 0.961380670706164 1.13149147312610 -0.96340222730275 0.219702657690731 -0.48136270579752 -0.293689253175933 -1.92038552443950 -0.279263161025423 -1.81536014332765 0.330258176665743 -0.848706749679649 -0.155086441474467 -2.99929824572611 -0.104391588781333 -0.637268939960458 0.485204464314118 -0.420410930413692 0.563196117724674
Rv1155 -0.0702760865026271 0.223409573573843 -1.55808514350089 0.440089543230148 -0.421113994839093 -2.64427109572630 0.243428168254336 0.024252383659556 -0.751651288850754 -0.297612878665772 0.580689614433588 1.29115033284056 -0.0753760282115273 -2.29958229669308 0.418268005042306 -0.23489175242209 0.117245888366727 0.0999189605970992 0.861714762338868 0.120847636531047 -1.49876487510768 0 -1.15285183773026 -0.604581398669264 -0.952890533760752 -0.317834230550888 -1.94934801716682 0.48094698387386 -0.241419744050150 0.370318784862862 -2.26383324463482 -0.417713854198736 -0.108942619432649 0.582430338176727 0.0662259473930336 -0.129030677461198
Rv1197 -0.261482848263831 0.754792288554864 -1.28842564290545 1.02364176778953 -0.840812361818307 -3.14894657904897 0.221091849821868 0.943303779555471 -1.54968153067641 0.85371020031322 0.513296075997651 0.563158825424456 -0.761573898255687 -3.18261385524765 -0.904179514858263 -0.00184636874854443 0.074522397533395 0.148320441419146 0.333343206295687 0.59018978362499 -2.58399369018093 0.694940442564715 -0.303500377437746 -0.0703217303860466 -1.13886728128498 1.59308529400083 -0.865285796225775 0.171986553968774 -1.28807380547408 0.186515716936080 -2.93420910106949 0.355127663787056 -0.271384319145302 0.707723174104823 -0.0246927309990615 0.176564701408795
Rv1198 0.076265768441082 1.03208607044240 -1.3388567910388 1.24564111755198 -0.81265814489705 -2.90327050957317 0.386668540912342 1.06511863076559 -1.37524870613331 0.89423421682887 0.777498028241847 0.661661690046086 -1.05169879960792 -2.98281949801223 -0.662729973959694 0.51239062749845 0.457601605583327 0.519840975682963 0.750527081190328 0.798027624933598 -2.35554165750688 0.84960868665104 -0.220850337225292 -0.139047867836818 -0.988432768619715 1.05765573483749 -0.132321604683409 0.114649459078822 -1.28398974746249 0.0279895489778618 -1.79456360008536 0.110648059511827 -0.104848248596263 0.909595345341269 -0.0772212353666788 0.0468193614761713
Rv1206 0.595786224377093 0.139643267439303 0.112321701740800 -0.328892485893201 -2.24103968057778 -3.02298993544939 -0.0428803489276048 -0.57838745791047 -1.90714401539861 0.0183527781323898 0.183090963313922 -0.204674309265654 -2.02079850503710 -2.38061782378272 0.0390285855106422 0.130205579826908 0.651148063378111 -1.27595103545506 -0.65099823897992 -0.308348316691487 -2.19759519366482 1.10334172341524 -1.08740809177382 -0.248404921854712 -0.373077670641097 1.06537753911461 -0.584153706800247 0.024237689117943 -0.36251795821635 0.405360078809049 -2.31967452660179 -0.290526952715821 -1.26102325284381 0.0774232595972706 -0.537011654657976 -0.406155259506693
Rv1704c -0.528363212628556 0.937896176359274 0.654083121225506 0.361435238093300 -1.17166127219348 -2.89149976958754 0.264383681558468 0.00316709584306745 -1.41109744364858 0 -0.396439695618146 -0.251400490715234 -1.45003100115396 -2.78249142599587 -0.0239217609640070 0.481798499798155 1.26214207243355 -0.339688447859391 0.842729763762463 0.703117384666742 -3.74256895281194 1.00894062263052 -0.940645030499143 0.249499628977701 -1.68986265466768 0.790466141524965 -2.26207165037951 -0.00126036109387571 0.0407541321762154 1.11932644015991 -1.87733221549133 0.258330372329764 0.345587260386784 0.295000159118609 0.481396886380581 0.782098752832618
Rv2346c 0.00884271114017702 0.920115170981441 -1.12946591028971 1.10050246651272 -0.483401993362597 -3.03482750713498 0.387459030804409 1.07621958483042 -1.20794004495594 0.66076422588224 0.647099274087711 0.6868201105821 -0.570603836865186 -2.71999731183909 -0.585854274124301 0.331773240802932 0.779488513751315 -0.221704736807313 0.660277524390818 0.647852003668581 -1.96430899444338 0.83976391740044 -0.499504924741200 -0.293584883546296 -1.13815121463753 1.04736213995146 -0.325379476987251 -0.031596290532454 -1.31329821991643 0.537244717434826 -2.71180932304430 0.0143112376060969 0.00254270302015822 0.916493136323239 -0.174904231263810 -0.128903200057326
Rv2347c -0.192238203053315 0.924961139560112 -1.20992362263802 1.17419099590245 -0.831582817840275 -3.03080137994746 0.373309146168888 1.05609396028059 -1.31779363310086 0.916634972959084 0.520223433772141 0.861781987749634 -0.491567992396284 -2.75318162804817 -0.717729986251695 0.082882841807023 0.216574168398604 0.373486605055175 0.521729653549279 0.574109676234483 -2.04951110363332 0.900356714421727 -0.246719815921728 -0.0656014996235538 -1.15669804602841 1.70441111229214 -0.925245093935363 0.276204745939308 -1.24627919859890 0.338047732870047 -2.96526846517247 0.47412228216344 -0.22703583965976 0.872547795775353 0 0.261490056912311
Rv2348c -0.531108850994546 0.888919840938655 -1.02008670047875 1.21390383215372 -0.320405441212127 -3.15583177288279 0.449022200724618 1.38542631652169 -1.63451420155834 -0.16840388729774 0.134458046513553 0.821529326322301 -0.412294455098678 -2.48367835849666 -0.299351983125794 0.254687448537991 0.0917748809682071 -0.903395381921864 0.812249559270296 1.09936454848463 -2.31268723040852 0.469219493627984 -1.13925161508367 -0.85732823061057 -0.710407350905758 1.82591776731428 -0.820220650651479 0.122294152479223 -0.858170243464442 0.0106749740041348 -3.19241156776630 -0.172943828429192 -0.101379131074837 0.0231300679947656 -0.484253234602025 0.187627526934315
Rv2409c -0.902103312426282 -0.216459168685123 0.140005508876517 -0.0475428045413685 -0.696970731417299 -1.78446431198653 -0.315453317138427 -0.080059332707001 -0.96429624667741 0.823247817256768 -0.0528912738472205 0.9807779420981 -0.895935977304937 -2.5421521709715 -0.192237842639676 0.0106737929024382 0.468120173560418 -0.606464839765171 0.680943316444598 0.290406466359909 -0.405389962502957 1.66697795394285 -0.957074713481457 0.0061533675730592 -1.95318906982165 2.27155379772203 -1.12118953066924 0.728480756358577 0.554470407581235 -1.03694251948894 -2.52555490622272 0.566618153045077 -0.382917117212849 0.857725120585105 0.981574137291003 0.185805142077160
Rv3619c 0.278663501004095 1.10405025130361 -1.22125370837018 1.41152664372206 -0.814593463377941 -2.91984019511109 0.352928417828005 1.17416886299004 -1.58126008092608 0.917945197339413 0.903339671735673 0.655670309783263 -1.12216063405480 -2.90420559435536 -0.641353172187454 0.583663612519318 0.261241827182211 0.715206136170545 0.831152647708137 0.854439632045972 -2.37944535748494 0.66364056404294 -0.112412031591454 0.00676683440507604 -0.868513220514922 1.01194349093923 -0.105151999694809 0.209570833310108 -1.25602104445854 0.0847226321108548 -1.80738080293650 0.172426976124464 0 0.898852846958366 0.0736967901530681 0.138789943933065
Rv3620c -0.492941526988335 0.759572176442956 -1.25704984445815 1.09045865582883 -0.867701026152562 -3.32983670455866 0.445930655501869 0.805726553870518 -1.47777140964050 0.878355451444169 0.561179641716797 0.770185745444057 -0.449391869936231 -2.82601047904464 -0.604902872228683 0.059302021533478 0.505605101084831 0.42360619563438 0.472910070899293 0.550060144645923 -2.01096091298369 0.993912956679594 -0.273606727367348 -0.291754982209878 -1.05239377497281 1.45973530737738 -0.982527523545573 0.184272769845030 -1.51417752534671 0.400994447039143 -2.75423957580881 0.402034970008936 -0.0959929895438435 0.807038982202439 0 0.270769178633529
Rv3706c -0.445557168040812 0.208280392264544 -0.70443867869587 0.744068388831189 -1.15381256095212 -1.63343636485853 0.120278089047550 0.0255936534088289 -0.483260334584691 0.0679423076474709 -0.2534386455474 0.525402455648206 -0.957204623446892 -1.96605447790585 0.970140466487568 -0.0233458348657383 -0.0777720474251589 -0.805778376294567 0.126959205104428 0.356864260077978 -1.75555679596777 1.53935227343499 -1.40502619548705 -0.910428587848067 -0.715546416367564 -0.224613049254511 -0.635519022473095 0.197929626446422 -0.703079279331993 -0.51782347352838 -1.59583901655949 -0.00486253974043119 0.094691933225692 -0.133550566284809 0.806200009690327 0.736861357058206
Rv3823c -0.386908707316573 0.594932034898824 -0.356016528697508 0.411390361148907 -2.23879391759327 -1.85489166861422 -0.199349318502235 0.161185372384767 -0.710299196720685 1.03346624101834 0.332746636645771 0.295456327877433 -0.604260459236608 -1.58865451880898 -1.06829999369564 0.0425756512981272 0.276479824951225 -1.62074599293862 0.206951186483024 0.723690678433154 -1.18682949623021 0.655215761577165 -1.82911281849660 -0.214507589827172 -1.55143604868490 0.417572079407363 0.734764240614746 1.60204905978291 0.0618947584460808 0.240354920674906 -2.22455718596532 0.905899303249043 -0.169032732872824 -0.277672054184984 1.08745818104619 0.290024897898905
Rv3889c 0.248969103860777 -0.229041001458765 -0.207584883149661 0.521182701710551 -1.42887018999057 -2.78453646562361 0.501400231956029 0.168111821476119 -2.27571721494125 0.340954278542469 0.845589881157352 0.686607365039327 -1.35511278549228 -3.57652622058451 0.206695712981384 -0.152890813789284 0.0453734045722307 -0.938716573691486 -0.226906159964449 0.212430714279321 -3.34322350530822 0.0810465731900497 -1.19419124582764 -0.325215990843033 -0.730658866953073 0.960489571700144 -0.533832843025658 0.79069375241507 -0.473008743535129 0.357405497436962 -1.53446894063928 0.453475861254869 -0.227391440671113 0.829976104552496 0.719818514709933 0.846515521411357
Rv3890c 1.24849890976969 0.315081681397603 0.338391741144634 0.116238435154489 -0.605127605954129 -3.43397927089775 0.0407081177584241 -0.0431918427678358 -1.65291976069881 0.358394174140849 0.680510806850453 0.774172194909349 -1.01421561879765 -3.81650237623521 0.486642376330884 0.546529248614949 0.33501496071927 -0.878073532360793 0 0.473012270357475 -3.26561668613988 0.810202314303582 -1.90839184985762 -0.984862006141234 -0.572448953654773 1.72634577172153 1.46378794606746 0.201296080616675 -0.698865192998652 -0.11360836839512 -2.00514345246274 -0.211491926205580 -0.465897994268211 0.183181981886077 0.163869324028485 -0.109938441182867
Rv3891c 1.04832976756200 0.108407304089166 0.42592694813538 0.125984441629374 -0.107753239636725 -2.46521737760892 -0.0134188206513386 -0.0756048282411678 -1.30352709649421 0.101585300223995 0.206646700907965 1.24845469648465 -1.02106362480427 -3.5880270101372 1.07969266279283 0.462750369044137 -0.477166534667755 -0.351662487989990 0.224392701222004 0.672713591864375 -3.36377710402433 0.424256350112804 -2.24423892869654 -1.30897159775348 -0.332656458365282 1.80329492378019 0.74037393594227 0.120469004333161 -0.797095121131078 -0.697138023956658 -2.19407546717720 -0.586996292341342 -0.636837162020622 -0.0592316686662957 0.0598929725404511 -0.0725144188375314
[+] Show/hide bicluster #25 motif PSSM #1. bicluster 25 motif PSSM #1 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0 0 1
2 0 0.090909 0.818182 0.090909
3 0 0.818182 0 0.181818
4 0.272727 0 0.272727 0.454545
5 0 0.363636 0.636364 0
6 0.909091 0.090909 0 0
7 0 0.272727 0.363636 0.363636
8 0 0 0.545455 0.454545
9 0.545455 0 0.181818 0.272727
10 0.454545 0.090909 0.090909 0.363636
11 0.181818 0.727273 0 0.090909
12 0.181818 0 0 0.818182
13 0 0 0.909091 0.090909
14 0.090909 0.363636 0 0.545455
15 0 0.454545 0.090909 0.454545
16 0.090909 0.090909 0.818182 0
17 0 0 0.363636 0.636364
18 0 0.454545 0.363636 0.181818
19 1 0 0 0
20 0 0 0.727273 0.272727 [+] Show/hide bicluster #25 motif PSSM #2. bicluster 25 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.6 0 0.4
2 0.6 0 0 0.4
3 1 0 0 0
4 0 1 0 0
5 1 0 0 0
6 0.6 0 0.4 0
7 0 0.6 0.4 0
8 0 0 0 1
9 1 0 0 0
10 0 0.6 0 0.4
11 0 0 0.6 0.4
12 1 0 0 0
13 0.2 0 0.8 0
14 0 0.6 0.4 0
15 0.6 0 0 0.4
16 0 0.4 0.6 0
17 0 1 0 0
18 1 0 0 0
19 0.6 0 0.4 0
20 0 0 1 0
21 0.6 0 0 0.4
22 0 0 0.6 0.4
23 0 1 0 0
24 1 0 0 0 |