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[+] Show/hide bicluster #17 rows and columns.
bicluster 17
Mycobacterium tuberculosis H37Rv
15x34
[+] Show/hide bicluster #17 rows (genes).
bicluster 17 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #17 rows (short gene names).
bicluster 17 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #17 rows (long gene names).
bicluster 17 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #17 rows (NCBI RefSeq gene IDs).
bicluster 17 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #17 gene upstream sequences.
bicluster 17 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #17 columns (arrays; conditions).
bicluster 17 arrays
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #17 ratios.
bicluster 17 ratios
Mycobacterium tuberculosis H37Rv
15x34
GENES Antimycin Ascididemin_Natural_product BZA Cephalexin Clotrimazole Deferoxamine DIPED Dipyridyl DTNB DTT Econazole EMB Eta GSNO_menadione INH mercaptoethanol methoxatin Nam NaN3 Nigericin pH4_8 pH5_2 pH5_6 PZA Rif Rifp starvation Succinate Tet TLM Verapamil X_109 X_124196 X5CL_PZA
Rv0606 0.000905686053441993 0.177212762905613 -0.240581870163448 -0.108361103685197 0.285230206475502 -0.137284070371764 -0.82817671641088 -0.0844511278041172 -0.0846431566695403 -0.266909961849867 0.256672702504079 -0.633030742037297 -0.325568433481857 1.74493208998095 -0.270898063354684 -0.106910165339872 0.291580271997286 -0.253699380802251 -0.181005015603904 0.572435288855194 -0.339036701296243 -0.243745620303232 -0.371483335979013 -0.193401806761932 -1.24364491226107 -0.901833898549274 -0.799416576115738 -0.00826445715595633 -0.00638307223542379 -0.358657874753911 -0.135490699989672 -0.643760077313415 0.102019068339072 0.110433254625092
Rv0758 -0.781436873277163 -0.132221137832083 0.622231116110551 0.0494523492632322 -0.326563050758113 -0.147037905539873 -0.237686438794408 -0.272654386390515 0 -0.102596538087392 -0.0504088439113437 -0.423801165612883 -0.353724828460026 1.57856711442056 -0.659234745476879 0.303136012333728 0.0902040671934791 0.270191308340152 0.0261824916710340 1.46341961885658 -0.183070797739992 -0.0815168030338767 -0.0286640425133161 -0.208148679282318 -1.4807949107268 -0.384192569624999 0.318804369712136 0.444154054884278 -0.139753219744358 -0.592510898091493 0.309391771221313 -0.660797630425163 -0.602882528947545 -0.166656497978667
Rv1056 0.0135214373253132 0.056257708469043 0.0528677260795929 -0.133532768305117 0.446600412058137 -0.457598929004595 -0.0267937401871536 -0.341028794216981 -0.0887555093589234 0.292992940873575 0.582206095514057 0.287259479074697 -0.407043153551139 1.54249228105179 -0.6707305382904 0.725272955237896 0.150703519005538 -0.126643854385057 0.60772807483287 0.630005364978632 0.013093904663812 -0.567345590400163 -0.513405057251371 -0.0819024578644954 -0.205675313332532 -0.833372509838568 -0.0866277114394977 -0.272908952993825 -0.250536490089795 -0.369228927174817 0.824389235318941 0.202236306237808 -0.401593714505036 -0.0684870304136133
Rv1574 -0.209034679521015 -0.304727663776303 0.186719521966968 -0.152393961399331 -0.1835966303238 -0.463054091421517 -0.560668846032936 0.00401282299830371 0.177753095239634 0.408098208700952 0.111385145511963 -0.319901416704366 -0.143961678418834 0.221668454966759 0.0464067544451728 0.184951505880993 0.319735020767598 -0.00667011860347997 -0.47172878453197 0.774702675084376 0.331560752982032 -0.164274158950439 -0.238914536302864 -0.367429984496656 -0.268997815277829 -0.00694853773067357 -0.541094011686239 0.373396012885947 -0.442218075526004 0.0355445752448935 0.814014454633992 -0.402376671872272 -0.254562809742350 0.203912056462488
Rv1585c -0.377019413236008 -0.454140289939473 0.269209126152931 -0.180803973358452 -0.00678629202923473 -0.244162360961953 -0.0516599525123783 -0.229280604924228 -0.0857885257160464 0.245946481223107 -0.0486098168147475 0.217142424279269 0.0953458714487925 1.21615835514814 0.193791459293827 0 0.0891384858702805 0.278357414148783 0.465995894137571 0.288464267461228 0.142868792076099 -0.0983800429391585 -0.350218210572755 0.772701618436327 -1.31148154814385 -0.339320846625878 -0.215298714186397 -0.394956877373628 -1.42245895125330 0.090732226864826 -0.02343667011646 -0.0836242970524173 -0.223657936854293 0.379817989483843
Rv1586c -0.0564223554185877 -0.225241294318549 0.79603017561788 0.0628049058667599 0.0234046871918610 -0.341105330967507 -0.278538371161917 -0.105014637243757 -0.172580186554219 0.52307235453314 0.123938085080570 -0.0196752724460205 0.0239992425060871 2.23513824062149 -0.0188142337192784 -0.122426984643832 -0.171472830085614 0.622095349122183 -0.451072560752905 1.28016498515526 -0.219735261454463 -0.639371232694724 -0.454286126255866 1.0247627354152 -0.380553567598969 -0.45592717485373 -0.215285808733222 -0.164166572009938 -0.139433978524090 0.0253428499767458 -0.040029187210085 -0.171323918387749 -0.155004352965786 1.01652835652250
Rv1587c -0.265576236453159 -0.275642380803078 -0.0846479619318566 -0.570451044680131 0.260323636697597 -0.651070714518385 -0.577840906733562 -1.05844277037894 -0.178349617512387 0.149072558676115 0.334140659638849 -0.514246949325944 -0.887357307490843 1.28420792816182 -1.16073437901707 -0.739854382007934 0.430758328634215 0.0279969856168531 0.262023931217053 0.779349188239437 -0.466760211736712 -0.537010813475306 -0.600072392360893 0.125757308644006 -0.951781523829254 -0.317172537205046 -0.387120312181224 -0.155642377797142 -1.56052092352337 -0.17025329330697 0.143978247625572 -0.480400558905785 -0.683297629958254 0.0969930433556346
Rv1588c -0.140218327589039 -0.100184482272848 0.679080982524128 -0.301840036261545 0.0873582299500084 -0.439244501447238 -0.146466271396916 -0.369343262853226 -0.117337588302189 0.340922865689983 0.336293008776594 -0.134521475772576 -0.592872136871534 0.932479551817369 -0.68369865355481 -0.186173778774226 0.30605292976374 0.452262239869466 0.240334504782506 1.12426132216199 -0.179469141630687 -0.049414091830249 -0.310428530947913 0.362609250332031 0.283268685893836 -0.437945240659644 -0.204136940123096 -0.0171558777009627 -0.196486766298822 -0.209304788463957 -0.447457918610743 -0.210728730072506 -0.249898879490904 0.940880231956539
Rv1589 0.555164259951196 -0.515075394386951 0.418466102560077 -0.290649896862175 -0.157929951361061 0.356730820599272 -0.0307323414774123 -0.511903174073722 0.470560083546904 0.582866706535374 -0.371358903424999 0 -0.162671605428453 1.08250294827379 0.0490498985164917 0.848537054160092 0.7944466061955 0.368484850085350 -0.381682062554074 0.989149895674149 -0.371397467795044 -0.0751847511502011 -0.10015244468296 0.964197085401837 -0.257247766310804 0.0126574639990653 -0.523061384709193 0.275528832697967 -0.158108447467113 -0.288826244172466 0.210276381775270 -0.179981955996669 -0.166345670376877 0.111361401418994
Rv1599 -0.0490449646217213 0.143540889757146 0.0564740863718484 -0.0711724789520491 0.242998665758924 -0.225766198599855 -0.258282719333051 -0.173444816150828 0.0281827947178862 0.731662955365175 0.0606432235280005 -0.343359842743142 -0.0557277716461793 0.303615700801072 -0.0211726617386858 -0.224502538727774 0.261626791441187 0.0211840039203958 0.510705801306304 0.202405191630496 -0.624162474766467 -0.70316462968913 -0.747683656690577 -0.165264653160156 -0.861775588913161 -0.764845777605168 -0.37359805452382 0.563319305430848 -0.833983872537553 -0.235385041680899 0.0749447924175836 -0.339573725693952 0.0853044157049003 0.334947956934158
Rv1702c -0.0113689114563849 0.0309084215724864 0.276999348810982 -0.195848843813557 0.0405251556349695 -0.694813271542389 0.0421131780450182 -0.504484391666154 0.0757044981293186 0.442773955204379 0.0219708386734481 0.303911658547195 -0.442135320431844 0.8159167595475 -0.557761527737657 -0.0840365396191751 0.377462935590717 0.346912046004267 -0.242674037195742 1.15849740647796 -0.000400453035254923 0.0430494307619188 -0.144264787395036 0.277249872396195 0.061766215906962 -0.0556286529798597 -0.566138860645984 -0.0820011755490542 -0.858356721144187 -0.422999593813815 -0.0424825607712189 -0.342101311369019 -0.237006534087405 0.41446187439949
Rv1982c -0.27620910765072 -0.186728523167064 0.212786687817669 -0.0165589894815798 0.184864754113401 -0.460523743375469 0.0943114811701436 0.0492050595833461 0.417230204027304 0.57091279750653 -0.41296677845791 -0.429678756234901 0.289917359697005 1.65489215427855 -0.360776031579578 0.153664688406348 0.501000636164792 0.142888604035248 0.146589846324228 0.429882379067299 -0.0875924467047112 -0.215408036719515 -0.137874814658773 -0.36306640280318 -0.0228381832923041 -0.0483940401330678 -0.230960022275186 0.107094055062851 0.146589846324228 -0.108562241032238 0.159561919924380 -0.351625353520792 0.279418271059831 -0.190592524802337
Rv2056c -0.106322482042054 -0.294415302775639 0.764203504337733 0.0439791145057461 -0.104734220675807 -0.0411880923595252 -0.0321408313764564 -0.240144842638125 0.266550950820828 -0.58709757097037 -0.101678533767009 0.162162993449739 -0.445912225243158 1.34260879250829 -0.719409708035756 0.682277503095732 1.33691472432125 0.406893855666932 0.463617615095761 0.514156915073287 -0.240186751433234 -0.216081776434742 -0.479767662084925 0.165107962712101 -0.514415043349092 -0.0830927077366886 0.117885075989061 1.51493799799981 -0.157284971012833 -0.317366148508206 0.424444922004577 0.124182343608452 -0.0522462909078858 -0.311372111447949
Rv3466 -0.189530439661350 0.0558590966263613 0.562047936618592 -0.288960802609965 0.152140569871214 -0.469727079538921 -0.169943764949689 -0.226748278145579 -0.265577207683570 0.179842457954300 0.241036836048522 -0.174234937145037 -0.645025479298722 0.435940688939332 -0.770955279077002 -0.105006786588667 0.313584429241379 0.425725017324919 0.386093311643143 1.20191647758753 -0.263596198913689 0.0116850544388538 -0.281976389698420 0.270578203308926 0.257164951154035 -0.381964475089587 -0.34224764385871 -0.151325639241252 -0.107285951403136 -0.23047823729503 -0.392642795377919 -0.172793928819198 -0.262927940356333 0.751936195975527
Rv3827c -0.169031326246246 0.0608607358257312 -0.0892410630675365 -0.181384243740439 0.02472866186516 0.0384829551901682 -0.504679172009896 -0.143731364701789 0.0618307095344647 -0.268172318694108 0.0161105551840676 -0.283681278527169 -0.0998080987791457 1.16267879209790 -0.0691560416661411 -0.085224619125557 0.0986654815526213 -0.502203673877221 -0.178229938164414 1.08466139570122 -0.407367607873565 -0.491185985135242 -0.456313122603491 -0.279480437542735 -0.850324305933417 -0.468826807397689 -0.97780132268508 -0.178390417195141 -0.849860799905062 -0.0926733995976578 -0.122811224818897 -0.178381663100406 0.19895107456729 0.53126916835443
[+] Show/hide bicluster #17 motif PSSM #1. bicluster 17 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 1 0 0 0
2 0 0 0.6 0.4
3 0 1 0 0
4 0 0 0 1
5 0 0.8 0 0.2
6 0 0 1 0
7 0 0 1 0
8 0.2 0 0 0.8
9 0.2 0.2 0.6 0
10 1 0 0 0
11 0.2 0 0 0.8 [+] Show/hide bicluster #17 motif PSSM #2. bicluster 17 motif PSSM #2 Mycobacterium tuberculosis H37Rv 14x4
POSITION A C G T
1 0.6 0 0.4 0
2 0 0.8 0.2 0
3 0 0.8 0 0.2
4 1 0 0 0
5 0 1 0 0
6 0 0.6 0 0.4
7 0 0.4 0.6 0
8 0.6 0 0.4 0
9 0 1 0 0
10 1 0 0 0
11 1 0 0 0
12 0 0.6 0.4 0
13 0.8 0 0.2 0
14 1 0 0 0 |