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[+] Show/hide bicluster #16 rows and columns.
bicluster 16
Mycobacterium tuberculosis H37Rv
20x37
[+] Show/hide bicluster #16 rows (genes).
bicluster 16 genes
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #16 rows (short gene names).
bicluster 16 short names
Mycobacterium tuberculosis H37Rv
20
short_name
[+] Show/hide bicluster #16 rows (long gene names).
bicluster 16 long names
Mycobacterium tuberculosis H37Rv
20
long_name
[+] Show/hide bicluster #16 rows (NCBI RefSeq gene IDs).
bicluster 16 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #16 gene upstream sequences.
bicluster 16 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #16 columns (arrays; conditions).
bicluster 16 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #16 ratios.
bicluster 16 ratios
Mycobacterium tuberculosis H37Rv
20x37
GENES Antimycin BZA Cap Cephalexin Clotrimazole CPZ DIPED DTNB Econazole EMB GSNO GSNO_CFZ GSNO_menadione INH menadione methoxatin Min_med__succinate_ NaN3 Nigericin PA_1 PA_21 Palmitate pH4_8 pH5_2 pH5_6 Procept_6778 PZA SM starvation Succinate TLM Valinomycin X_109 X_121940 X_124196 X_241 X5CL_PZA
ORF00329 -0.563658974920982 0.980135614926415 1.51866243729763 -0.565430102053483 -0.672254255524846 -0.0249356765298193 0.113365972666667 -0.686351504299415 -1.10277950907207 0.0816936876438887 -0.563671543955953 0.0510504925101063 0.136895556981128 -0.494157278929657 0.375814199901553 -0.498788252755753 -1.39075059112979 -0.839479415944117 0.0189579942052452 -1.19823754992736 -0.599776701551387 -1.09488385470532 0.0651029075067897 -0.655568656034718 -1.12819963418807 -0.194103967557479 1.36786383127046 0.749834478409197 0.0700295327656596 -1.26703038369353 -0.350502120259796 4.1588315030865 0.0808150367454568 0.676199871522598 -0.535252902836312 -0.58401459758854 0.691556087889072
ORF05235 0.397374934383405 0.0956449965826325 1.80130560544947 -0.317020515387332 -0.333352193439527 -0.129869160190492 -0.0656704523142875 -0.0490155912025914 0.328687582827621 -0.114652833782336 -0.43637220802745 -0.588688919304179 0.00521122247717783 -0.0841364283616864 0.472007908617051 -0.496597728749355 -1.00148162628432 0.0918275182439453 1.24436647621594 -0.377352445410365 -0.472614987566498 -0.434220492339303 -0.776341720650932 -0.258375143251522 -0.778718464595216 0.25141108275958 -0.249827208871364 0.386220481853672 0.0609094256909282 -0.710804783736326 -0.419911134083259 4.16576343783531 0.220286757576409 0.531097103815232 -0.375497052019558 -0.0975280117547999 -0.233644401180568
Rv0367c -0.158793913161397 -0.590421602026129 1.46060480640681 -0.226157920570283 -0.509683650703562 -0.105858725554897 -0.210251298756602 -0.0777704449815402 -0.592307698398207 0.178272651573014 -0.230908937255324 -0.462836903472581 0.465718226542110 0.582132454524057 0.934754908192786 0.0498920883765758 -0.458058555581723 -0.329720244785406 0.144058355405759 -0.34281597882621 -0.112001639736445 -0.203513636374704 -0.335544184187211 -0.478713858455071 -0.363461665186145 0.734794539717593 0.299515522273586 0.483204718026287 0.38390719829694 -0.21693245774638 0.133751737645642 4.13928650963926 0 1.65649492122858 -0.281705293421613 -0.0815921461036813 0.280001557317153
Rv0476 -0.416891036979854 -0.26503885691581 1.37538378097780 -0.564800283878837 -0.399438186752982 -0.0374105507720245 -0.733394874544927 -0.397394359719992 -0.0823091759409531 -0.111482618806860 -0.174600023619572 0.354156194648004 0.764324014432413 0.606734014883065 1.85775088068064 -0.482776567392952 0.192493674185286 0.267911601619649 1.55680273669302 -0.220013994525065 -0.586284269616475 -0.594570017114525 -0.157261173500580 -0.09917719077015 -0.147695008151661 0.577234091219496 0.663460865271867 1.04463165745126 -0.483736612433643 -0.920525194326481 -0.251866948435769 3.19144818729581 -0.113321876996190 0.548170852842252 -0.241613909888644 -0.383228920898905 -0.369052279598946
Rv0477 -0.240290700324867 -0.937793919283148 0.946204137354518 -0.138297580662172 -0.742034384258589 0.0456548492739799 0.0713800121505627 -0.740335137479401 -0.31406286931507 -0.909280056348789 -0.267749091429355 0.178403101676744 0.419605103535089 -0.175760095805054 0.0922086979007482 -0.435167066369397 0.0698427664686075 0.178403101676744 0.8720405443824 -0.408596099513192 -0.189719413552378 -0.860667316518172 -0.218963152495128 -0.236831750962943 -0.387409737480627 0.462992853073067 0 1.47021502016547 -0.568681903733532 -0.649764927067784 -0.243521674497317 4.11345356914851 0.174837839054404 0.250652674988953 0.14926708494666 -0.0246315860557989 1.26327737972896
Rv1389 -0.84084340144185 1.47971164711827 1.95203533308864 -0.0572170113323092 0.165857855490428 0.149604337949405 0.0869228674208967 -0.468194688327901 -0.198180225911765 -0.0583635769746819 -0.204315619308051 -0.120696646769284 -0.251286408436392 -0.102539439587553 -0.160807008263473 -0.721154269868864 -0.428136758803651 -0.263500428725886 -0.312684054216950 -0.178012540541214 -0.438308593178034 0.0127065012159761 0.150737756729537 -0.672799313160669 -0.890434468605941 0.0304171226586709 0.609879315594473 1.21221796615611 -1.29566006353339 0.0923711257025519 0.0483541748708049 3.33787583839142 -0.024462330367682 2.49158243174999 0 -0.0913410482784031 0.209611061696979
Rv1390 -0.76312930457727 0.799543000336396 1.99789031944237 -0.328724080549632 0.146422112229372 -0.0427001783618201 -0.523207749277153 -0.125379894912187 0.0151007317777421 -0.213464825542196 -0.291077738310534 -0.177373286431747 0.206285331752238 0.0342400380751875 0.653460326627073 -0.0187377194654448 0.223450201875318 -0.231542365919594 0.320564076572742 -0.722970451902496 -0.646379935736461 -0.154239583919585 -0.467103861125709 -0.870544934192351 -0.733567333957755 0.385428268618503 0.0130200929645875 1.06012847467747 -1.69732758515340 0.351683747314875 0.00213334886206442 3.51355704092741 -0.263731914619857 -0.169595070317858 0.0877365736452077 -0.43864993326043 0.402272801955628
Rv1989c -0.571413372617996 0.212854463332904 1.61009492960971 -0.519893106327048 -0.64440119906813 -0.251006304913530 0.147590405332449 -0.512140847225492 -0.43667659876078 -0.319915062535733 -0.817978740793571 -0.259432503690131 0.0626678507514455 -0.450143322531532 -0.0149876248621996 -0.586103928415751 0.491428028220038 -0.85692201164649 0 -0.59762207079398 -0.625311931406108 -0.479450552973491 0.212854463332904 0.212854463332904 0.212854463332904 -0.495119583591128 0.212854463332904 0.78691782917471 0.310990412243181 -0.880025561666267 0.0432478999564242 3.67379165383923 -0.151938522838247 0.711002424270182 -0.495377057554939 0.0568622697054916 0.212854463332904
Rv1991c -0.266365972053528 -0.614069721191952 0.683706167128442 -0.181610918168728 -0.407969711039192 0.146016821336787 -0.123845075875751 -0.322958291007441 -0.197053258150598 -0.557733594773345 -0.545152975472679 0.323112327938603 0.0582775055046483 -0.264812479072241 0.280597321704499 -0.426251662487835 -0.686257212057026 -0.453684649427607 0.822759707542287 -0.79072775500537 -0.162970291916619 -0.842293250460711 -0.0811516242839542 -0.404854511646802 -0.418290892437598 -0.091987159874515 0.703863846191502 0.283057515202891 -0.130850085271080 -0.798972046576483 -0.0237534674672045 3.85338732283452 -0.355390416099473 0.164628933018546 0.239703437040121 0 0.787039215722587
Rv2430c 0.0886425444024255 0.797027475116091 0.00917186420525359 0.323063475884078 -0.117964712894790 -0.760078599863073 -0.461169961990872 0.254004535082191 -0.121563052331056 -0.303898276642799 -0.2055324271933 -0.178093166725689 0.19318356305938 0.178221568185881 0.560756967285925 0 -1.54224575305882 -0.109409085949016 0.637438323703054 0.684608420762682 0.510443788515768 -0.44158514872388 0.310970131838781 0.350807714970222 0.683101087344334 0.637679742397661 0.891036423051224 1.14236998777770 -0.756663065172422 -0.370044872293554 0.345836545562627 2.66194321004882 -0.382920782735631 0.379481229093239 0.254557459960375 -0.466521947079887 0.289972972016711
Rv2630 -0.467235068738819 0.0160817397310576 0.619416993205094 -0.469315406009032 0.118512716650914 0.511942489777861 -0.0439719072116926 -0.12353149611629 0.01703436192879 0.134945353106935 0.0296069487801018 0.245617627637761 -0.433104998375152 -0.246408819579756 -0.573997668547915 0.135330487061795 -0.401112634692934 0.245617627637761 0.74153064530085 0.227973326406994 -0.117889856037112 0.0386520320623386 0.130271518070201 -0.145233016464069 0.185737093515214 0.620401571687537 -0.368010010021984 0.214138457210106 0.0723901693132609 -0.255737165922383 -0.543048772985076 2.31293745631818 -0.167687366410313 -0.483877521820239 -0.160019577281585 -0.181015154800429 0.724391942262484
Rv2825c -0.569385981384614 0.521010236859218 -0.05387252540733 -0.102415475557788 0.320276454601495 0.774197788778719 -0.644705146824326 -0.385227722812293 0.0669946807970252 -0.757977269860357 -0.30015511901944 -0.543084193748791 0.930845689731617 0.136737534071733 0.779758481682392 -0.249429372158211 -1.07161784522547 -0.340109876120939 0.0589515577342938 -0.373116076083506 -0.0393907014634906 -0.381929349258026 0.664957627148287 -0.0365663850868168 -0.520210640092904 1.21533505270177 0.620920163330734 0.509279229355625 -0.86359670073525 0.237804503512376 -0.355163469009734 2.93108570527381 -0.324020079602028 0.836530489309175 0 -0.234363111465594 1.16400521534855
Rv3426 -0.990076079408762 0.289962961534903 1.28110061869131 -0.138542280873070 -1.00615286809606 0.301290950965649 -0.614813944026813 0.447830882527685 -0.829338107954357 0.0826980115763167 0.662279198376949 0.0222859074732403 0.376074543638149 0.387843337967743 -0.138316389868207 0.0924762365733231 -1.83429236990992 0.0150944171038015 0.210560222696056 -0.284118840390019 -0.505393454470016 -0.884315664532248 0.467185554422323 -0.677181281322551 -0.561151881871258 0.709186098014286 0.234576329587452 0.91761902313559 -0.556524547594204 -0.717653572170395 -0.0116398928167106 3.73421504883685 0.174773285252813 0.501739329976925 -0.0537772767971714 0.388403982229973 0.813158294345095
Rv3429 -0.814916386027015 0.593904972141709 1.05646146357252 -0.052586390759663 -0.389583277955001 0.423475599803086 -0.583473578787553 -0.118272015866630 -0.554714323587991 0.0249572244945399 0.065265073825042 -0.366666904686749 0.71634929981277 0.96812922758174 -0.0158502676339879 -0.512598069614515 -1.10418709713483 0.446656666792987 -0.0507327871440314 -0.331775711140957 -0.43907949731348 -0.484124154659517 0.751674288113951 -0.843111747396753 -0.825018065413572 0.948208805895729 0.806640352378128 1.24807825136833 -0.681304388242754 -0.0878772445460616 0.079879893109305 3.11445090088978 -0.00296389929451061 2.0368564603173 -0.0935728155995075 0.0186524396529432 1.17505409401085
Rv3462c 0.0183382252313498 -0.0762547591270801 0.602676814949944 0.151147486552489 0.22599466541709 0.0523054038651648 0.312651317743571 -0.091695474246256 -0.110579837127281 -0.283815192860671 0.363606423390449 -0.146830168704531 0.269747180359119 -0.225263567669718 0.470565307056473 -0.125919248852872 0.301674650152014 -0.69787351735259 -0.412385725973026 0.114754973915649 0.303893948784355 -0.424648751879463 0.490955061427187 0 -0.187230053527752 -0.281048916551238 0.476759378208616 0.457826305964932 -2.11402785652092 0.127108930650066 -0.170029509095124 2.09431108027146 -0.141130005549842 0.700897170970369 0.0646740127808441 -0.187785658910007 0.456399397735399
Rv3580c 0.123562780295904 0.95043589732025 0.43221604605193 0.132849025906732 -0.710707866608606 0.0385316463518033 0.350528654760943 0.0165123301374138 -1.19002029211979 -0.194616221346204 0.353083543879959 -0.448842405246955 -0.228057614449798 0.742885477791147 0.17532609221513 0.108941082107732 -1.51064265768224 -0.80857980862955 -0.0325505929087535 -0.655463026978214 -0.934806135302669 -1.24341776290649 -0.0319840450017084 0.54617242276957 -0.442303714313244 0.218297536529041 1.12590954475322 0.556484716559894 -0.627855754232131 -0.436033295257814 0.365007800339244 3.89173352515639 0.228035566438849 0.911016433687191 -0.155031513242883 0.0270659397205551 1.08486352325303
Rv3582c -0.469709709050304 1.23261944236710 1.20258315231838 -0.313295972769198 -0.285152867122760 -0.517361015168145 -0.185744253348996 -0.150210442018877 -0.335970683688722 -0.141211346979860 -0.049372432256272 0.336721535384606 -0.162792380488073 -0.389591617460662 0.0182853969058162 -0.302480785940692 -0.418617888540384 -0.131544447249876 -0.148909983712570 -0.292421021247811 -0.436472570536163 -0.870139631809299 -0.469416894092434 -0.744539292920516 -0.559161966658822 0.876842902155175 1.07522434687519 2.25884622947215 -1.13413649659595 -0.566951910280113 -0.228861861853890 2.82546608212875 -0.228463534497776 0.0774989589640203 -0.0587648042661791 -0.410895771735087 1.27559414765254
Rv3585 -0.683254959227933 1.00308722311835 0.380999052289313 -0.302873366144321 -0.612931412653033 -0.794210816255752 0.0163041318168503 -0.671149067347774 -0.713032853354148 0.0517318433539274 -0.478571570998111 0.29065530848573 1.14641801149176 0.125208116605714 0.94309773672037 -0.520164056390247 -1.46277590758647 -0.384477790926146 -0.508048452615988 0 -0.282609572421386 -1.01364810270019 -0.113379431607213 -0.0977355497383223 -0.350512415950753 -0.0218653679067566 0.533417209139406 0.769580052488333 -0.519307470507684 -0.665626082532766 -0.113810715220464 1.35548106316767 -0.357945591523972 0.0237769174503525 0.329326931951995 0.0189359671389163 1.24713553795004
Rv3872 -0.355318495168078 -0.0569659348334056 3.15559692682664 0.149480217339700 -0.264345841147214 -0.0825738703789522 0.158064826309291 -0.894984581272392 -0.221264222818814 1.41086286373195 -0.439178477079587 -0.0341945401630197 -0.918657794715752 1.26282092632586 -0.423460464270141 -1.00595957499760 0.156284680389835 -0.0468798124016157 0.8537889642291 -0.880508122530045 -0.251648274917408 -0.292481093179077 0.155152388794496 -0.580058732465392 -0.837860750178401 0.096744297769066 0.467554926415489 0.936781807626485 -0.00254486618377770 -0.755313733517434 0.36920347388807 3.14659022082441 0.837384878688036 1.20579540614824 -0.306139511346811 0.54827178992229 0.340570659323904
Rv3873 -0.682938726311629 1.01195585449903 1.46931711950447 -0.187253184232764 -0.497869056415445 0.400314785315759 -0.227365024816600 -0.386554389110432 -0.180147350508519 0.738800691764424 -0.317634260512447 0.089840952041576 0.636919549648864 1.1542352369709 0.799286795951479 -0.323522576537682 0.0979985615479233 -0.662393501559233 0.57063421926243 -0.887235875628133 -0.555657329682666 -0.698279483080532 -0.523163367978074 -0.929252795703469 -1.30875933337252 0 1.05165388173570 1.21770691541501 0.518826943872381 -0.895094884186464 0.251044242944550 3.80385407692976 0.0483216527479675 0.324968189041092 -0.272330808826189 0.051996507871371 1.05162762136090
[+] Show/hide bicluster #16 motif PSSM #1. bicluster 16 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.5 0 0 0.5
2 0 1 0 0
3 0 0 0.25 0.75
4 0 0 1 0
5 0.5 0 0 0.5
6 0 0 0 1
7 0.5 0.5 0 0
8 0 0.25 0 0.75
9 1 0 0 0
10 0 0 1 0
11 0 1 0 0
12 0 0.25 0 0.75
13 0 0 0.75 0.25
14 0.75 0 0.25 0
15 0.75 0 0 0.25
16 0.75 0 0.25 0
17 0.75 0 0.25 0
18 0 1 0 0
19 0.5 0.5 0 0
20 1 0 0 0
21 1 0 0 0 [+] Show/hide bicluster #16 motif PSSM #2. bicluster 16 motif PSSM #2 Mycobacterium tuberculosis H37Rv 22x4
POSITION A C G T
1 0.666667 0.166667 0.166667 0
2 1 0 0 0
3 0.166667 0.5 0.166667 0.166667
4 0.166667 0.666667 0 0.166667
5 0.5 0.166667 0.333333 0
6 0.666667 0.166667 0.166667 0
7 0.833333 0 0 0.166667
8 0.5 0.333333 0.166667 0
9 0.166667 0 0.833333 0
10 0.166667 0 0.833333 0
11 0.666667 0.333333 0 0
12 0.333333 0 0.666667 0
13 0.166667 0.5 0.333333 0
14 0.833333 0 0.166667 0
15 0.833333 0 0.166667 0
16 0.666667 0.166667 0.166667 0
17 0 0 1 0
18 1 0 0 0
19 1 0 0 0
20 0 0.666667 0.333333 0
21 0.833333 0 0 0.166667
22 0.833333 0.166667 0 0 |