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[+] Show/hide bicluster #15 rows and columns.
bicluster 15
Mycobacterium tuberculosis H37Rv
25x38
[+] Show/hide bicluster #15 rows (genes).
bicluster 15 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #15 rows (short gene names).
bicluster 15 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #15 rows (long gene names).
bicluster 15 long names
Mycobacterium tuberculosis H37Rv
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long_name
[+] Show/hide bicluster #15 rows (NCBI RefSeq gene IDs).
bicluster 15 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #15 gene upstream sequences.
bicluster 15 upstream sequences
Mycobacterium tuberculosis H37Rv
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upstream
[+] Show/hide bicluster #15 columns (arrays; conditions).
bicluster 15 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #15 ratios.
bicluster 15 ratios
Mycobacterium tuberculosis H37Rv
25x38
GENES Amikacin Antimycin BZA Cap Clofazimine Clotrimazole CPZ Deferoxamine DIPED Dipyridyl Econazole H2O2 INH KCN Min_med__succinate_ Nam Nigericin Novobiocin NRP_1 Oflox PA_1 PA_21 Procept_6778 Rifp Rox SM Succinate Tet TLM TRC TRZ X_111891 X_111895 X_121940 X_241 X_59 X5CL_PZA ZnSO4
Rv0053 2.88029270957401 -0.220835702675796 0.322509939969661 2.88488001938226 0.00961706434429916 -0.464360698027969 -0.78747043242406 0.225736174022839 0.453582201019025 -0.208992114267377 -1.31383219114196 -0.0295524529447731 -0.0248269740163998 0.00961706434429916 0.00961706434429916 0.0188554340002166 -0.543170651411579 0.00961706434429916 -0.13138923642979 0.421606380494451 -1.29545882838315 -0.896573174250207 -0.270499253438156 -0.222469718777002 5.14257649737498 0.392663062866898 0.00961706434429916 3.30309228460529 -0.0881783917448431 -0.365601176467404 0.00961706434429916 -0.0828821078517154 -0.724329835188549 0.47484188007528 0.134170050659486 -0.246205623670504 -0.0448637309494725 0.00961706434429916
Rv0054 1.95077772976061 -0.595662788012375 0.74378613802743 2.57686127897767 0.681076739579643 -0.189590307565426 -0.386138682132974 -0.212833280774366 0.75574316726428 -0.464561151142432 0.00467962774369042 1.41750272785216 0.34078715538429 0.564847322873711 0.79465206159568 0.594380140993104 0.323786059756106 -0.499243511255458 -0.306690815474284 2.03119782339746 -1.09640641613452 -0.910290014397555 0.500464082055939 0.146716422588942 3.99267240789046 0.160257837006484 0.346977831907790 4.14455157890065 -0.370600150513982 -0.0460589174488535 0.24614888245556 -0.342209909825906 -0.824408820355935 -0.462095666449918 0.214947308466066 -0.279151480229362 0.590566563576278 -0.49484026818087
Rv0268c 1.89195949215374 -0.298778376633063 0.631071966789105 3.4471628920999 -1.03228857601629 -0.537917283898957 -0.761104786994034 -0.179565105024885 0.806222417538973 0.379109341240897 -0.93349907955646 0.480429487532499 -0.644612837178099 0.541142313284808 -0.912385092150341 1.15793037185150 0.723646942219732 0.707647830822026 1.90854393182462 0.226220404660612 -0.761529481103573 -0.586950650353694 -0.262368593996825 -0.441520164552204 3.93138445412803 -0.344021908016161 0.311862358850221 2.16868674334724 -0.100835539391701 0.340560795086782 -0.650905934816299 -0.200625740965521 0.31592511317897 0.889766266874021 0.218481143934646 -0.268140277131467 0.438446203756928 0.81828845857343
Rv0277c 1.45083748981115 -0.166528727086081 -0.794113868534296 2.81068111919089 0 -0.200704866583855 -0.283429149211123 -0.225614689511825 0.0311118634917539 -0.339996062823146 -0.0674886390632733 0.0204011263205574 -0.119519224201932 0.62407680555364 0 -0.572663724580929 -0.737853639756783 1.44489633706923 0.522557258656398 -0.220338378794518 -0.258858590527232 -0.240228433342904 0.416475977441515 0.122393638354736 4.62592687181752 0.474927152864789 0 3.73914303058354 -0.313242954358393 -0.0302126317213475 0.287591128824063 -0.0235863448865116 0.128999597956728 0.207863236533765 0.0339816252699192 0.199774118864686 -0.992124742739104 0
Rv0608 2.54840143019438 -0.140680621968154 -0.988725500217619 2.32849215884843 0 -0.445001231612137 0.0821905975643565 0.371832203351877 0.203927757386153 -0.181604439599802 -0.377890806323019 -0.574315389022068 0.82860402035735 0 0 -0.365437154008399 1.12906217921610 0 1.17394971259842 1.63211173146949 0.420055796463436 0.184342926514557 -0.595122062195609 -1.07897846283013 2.59129769721665 0.693065326057925 0 3.82116671242851 -0.494340882864392 -0.606018145201141 0 0.140606757425143 -0.631215489339855 0.922791825213082 -0.572200291907959 -0.880596752906766 0.0811303615380583 0
Rv0609 2.60559736129297 -0.256779173602734 -0.651200281886606 2.38980507681594 0 -0.499921267177667 -0.174253310825310 -0.495711719600332 0.775085748682756 -0.261371864090527 -0.281689509722193 -0.763821362152118 -0.0799192225252415 0 0 -0.48313332768957 -0.90823118755084 0 1.87046069757921 1.25736108328597 0.889747128718573 0.413389218736611 -0.0861489710480637 -0.0568403379802723 3.70018640994331 0.908172258350685 0 3.913318552177 -0.474458296615102 -0.223185573763468 0 0.278306369368969 -0.386775299652309 0.0906224090098261 0.0778603888308692 -0.341322423296840 -0.187041043923957 0
Rv0611c 2.80388483947486 -0.431592467444283 -0.860903341335618 2.70530818424877 0.112900143547723 -1.23131486837718 -0.885278829738203 0 1.33659179941828 -0.608913383503127 -0.957285702241344 -0.257557096016919 1.05229864025424 0.112900143547723 0.112900143547723 -0.245792693379469 -1.20205489673814 0.112900143547723 0.168529185992409 -0.580347827885858 -0.875549928282475 -0.282666877868499 0.240695872309904 -0.703325488407338 3.4269332777849 -0.0898528187369999 0.112900143547723 2.48797587144716 -0.0960035865176769 -0.235363088726012 0.112900143547723 -0.758315790593085 -0.237225475849936 0.930929556499251 1.09337415784090 -0.4097924596208 0.339111969187643 0.112900143547723
Rv0749 1.19859820061895 -0.179823951906252 0.128339024728483 2.66581088164266 -0.160600251165768 -0.531622789622529 -0.113282786948342 -0.096363657213908 0.125968408309495 -0.0841227963390178 -0.457255687386885 0.235452470521144 -0.0906855881458588 1.54816829657885 -0.0091492666636182 -0.291045550381741 0.0253340138012967 1.08909488226345 1.81583238131299 -0.225291633246441 -0.192752208580950 -0.0877398541449159 0.495184641462566 0.431084934312854 4.66349952024772 -0.45451854279874 -0.672741790816998 4.82118641279202 -0.177241933277839 0.186232643769466 0.101778250086821 -0.219251180707957 0.0665647215652965 0.0408493435599844 0.240997032206427 0.333778793829737 -0.982155275654955 0.195079895989457
Rv1080c 2.12355245851993 0.000622057298537544 -0.532880307656276 3.28940073625802 -0.537196389924967 -0.787824298419768 -0.397812214437789 0.254463365730725 0.377672163563560 0.165046544554722 -0.660125298544632 -0.096754992999974 0.365413724579700 -0.992425783688872 -0.446362302057966 -0.287653696981291 0.142101616390594 -0.34201626214243 0.430453540115259 0.365704512865203 -0.329575658805885 -0.424863140208008 0.295050892951019 -1.09205516078172 4.29025535092478 0.661523080028811 -0.415592357780245 2.81373933823510 0.211111913381756 -0.898580053323553 -0.437646367960476 0.300236964568225 0.221888336360409 0.612242592742939 0.213604994998687 0.625132065683843 0.0133112270168946 0.199869075266483
Rv1103c 2.66399844001669 -0.252221682058286 -0.240368840905875 2.47399126791901 -0.853034666118898 -0.687345474982502 -0.294357066442447 0.170650519627360 0.566482923786487 0 -0.448989743499252 -1.30326577689574 1.26019553139424 0.358750235359825 -1.25461192891093 -0.386300261626058 0.28421223535978 -0.87368003280102 0.210169993592218 -0.106715681482259 -0.018741527658698 0.574253530307561 -0.222509277723461 -0.150735006659859 3.36991698488582 1.80633556348312 0.0425578278880920 3.55820392228215 0.527072779502827 0.0966635229799351 0.358500123478405 0.0164121066056666 -0.329028514631311 1.64246559316100 -0.137254049327781 -0.340137625521869 -0.0590636787101837 -0.605227584342903
Rv1486c 0.936610287284839 -0.766688738073868 -0.010348430290269 1.91622113527214 0 -0.617158449534244 -0.243019954090874 -0.269909084208691 0.345610444478338 -0.717050583525331 -0.460917175259611 -0.514933513077414 0.568689629011541 0 0 -0.0753936988072957 -1.34522306769531 0 1.13507306092470 0.0640987025064428 -0.85340789526407 -1.30449762274802 0.152129765928158 -0.339864061853075 3.25355319672733 0.216772484879493 0 2.33564451060649 -0.210676094462188 -0.0919102951620343 0 -0.252774205795323 -0.464254847719654 0.577912333983927 -0.17173698930512 -0.871720236624078 -0.527923994711593 0
Rv1840c 2.32676469298757 -0.914770285711355 0.230436893681516 2.17792642203562 0 -0.84901855095004 -0.383330257370446 -0.555774891053569 -0.365840377725461 -0.354006971890803 -0.947845659899154 0.167112857347664 0.320147050694512 0 0 0.156651008502148 1.00323708675668 0 0 -0.183717534374419 -1.34000016742637 -1.13522108568322 -0.0173701427122949 -1.54339915722004 4.46126052218433 0.123694175430135 0 3.56301056847256 -0.670576057417523 -0.792369571314583 0 -0.702790856290597 -0.0915737819704589 0.603904253481938 -0.198679850818779 -0.0578855915557827 -0.0638655197763677 0
Rv1875 1.49512088641090 0.123906580755835 0.120695308347301 2.93560884141417 0.239094520950676 0.00210343101065347 -0.543249335629807 -0.207092991106941 -0.0940752324830206 -0.203230237373417 -0.361823715634028 1.03834789713036 -0.227720175097574 0.360360874656926 0.360360874656926 0.868118375117118 -1.59820066192934 -0.176803927264122 -0.0980669707183917 0.355188622475542 0.0610428355747205 0.0430576663553379 0 -0.454023873613219 2.95419906618237 0.107990328521519 -0.629047242885523 3.67155135145934 0.510359398910706 0.293714832168663 0.360360874656926 -0.258816727753103 -0.0955653330186046 0.734329610422397 0.30278505159682 -0.121614814930050 1.13538242405971 0.360360874656926
Rv1986 1.29981206599689 0.108419588088898 -0.437399098919299 2.26028264763588 -0.0143453775496421 -0.370254381462009 -0.152229036913840 -0.789884495450343 -0.369628382032191 0.226875002733148 -0.768737436523029 0.227351051114145 0.141256674596963 1.40475857709600 1.48147809107305 0.246849914323498 0.525852536871456 0.585858060683588 0.331351714445792 -0.0488921569217266 -0.441162300062045 -0.662473964774389 -0.337577505680737 -0.00309942457229701 3.5069105094449 0.408926635560813 0.696302940116336 1.92337453912331 -0.240970874030211 -0.181150450873994 0.330438354906457 -0.265755209922108 0.630567734764717 0.90339508263816 -0.373201796055168 -0.176309105819363 -0.259112964210886 0.186486704111321
Rv2306c 0.906524087186778 -0.179594148175234 -0.824236233976346 2.30976092986473 -0.244624637689909 -0.367384311864246 0.0871339711432778 0.169625755338625 -0.165269046296214 0.315240623611088 -0.202072050910572 -0.0204779299319298 0.144337125738805 0.286340461848624 0.750067950464084 -0.640368512548075 0.623058951618544 -0.610189286982134 1.22750704334704 0.685247420629914 -0.899208157019887 -0.319292549027532 -0.628190820201993 -0.821253483442212 3.42172919941352 0.406779710903106 -0.0857986189297626 2.39387955486324 0.0112647643741377 -0.746577538989936 0.195065295308199 0.0520408620698444 0.315918902039731 1.91530341731412 -0.605158099930792 -0.391108335428398 -0.580670166273795 0.164292991989123
Rv2331 1.65826110588134 -0.925618036845268 -0.382785975779218 1.46712073267383 -0.742189126612023 -0.267603097737771 -0.128320488712069 -0.159111255103320 0.736418830383668 -0.94954767793571 -0.823955136646006 -0.348615014230504 0.98423620323515 1.48628716098817 -0.0158770992063637 0.146511246952929 -0.373341258550512 0.847683439778654 1.40502841761509 -0.0730641877558902 -0.931865002225889 -0.865242869147069 0.236928957960282 -0.247857895194327 2.39836237681683 -0.0902577600244556 0.204858776374895 3.04123410141765 -0.167261584850553 -1.06846474600603 -0.0688071546067277 -0.0396300330539781 -0.152537244730633 1.76847620063054 0.238457261117768 0.0566599258369222 0.602195502225987 1.23532043189717
Rv2396 2.24551364058189 -0.388864640612305 0.80151575484364 3.00882978297110 -0.0753474858088853 -0.418330925174047 -0.221680214485531 -0.266456746193381 0.713307608444827 -0.159291331457996 -0.452589701012533 0.595614688722892 0.00144240312111505 0.653543318711563 1.97585649607751 0.575296213961863 2.27023724568333 -0.886468748143338 1.31241147367450 -0.0192377873000042 -0.468243158840917 -0.224903626956417 0.0814731817833343 0.285216324041811 5.03688862382287 0.0114381195594140 -0.460448952997875 3.34002308859817 0.0780417053744261 -0.185233858981794 -0.198911299778502 -0.242039697566601 -0.0354788851010777 1.26015375079296 0.215255384095382 0.0953872700093727 0.629733486333433 -0.372119138751727
Rv2465c 1.39145870316085 -0.0840913773293925 0.0399821534542149 2.45923284072712 -0.294709679228754 -0.195942886557604 -0.367567082754481 0.206096448319487 -0.122396235292556 0.117686289125172 -0.432817144321246 0.629276271095356 0.0487654948358853 -0.0761336149342383 -0.620082789651095 0.136587874188611 0.124092008838540 -0.577002044579208 0.0784157481630102 0.454833165617149 0.363052956597437 0.256297715707203 -0.194278252566793 0.187347203020952 2.93506331904971 0.783490645615691 -0.183514150445011 2.73448690206155 -0.0988109874933236 -0.183168317291643 -0.409303936850515 0.0579372051757786 -0.458894182163666 0.144293773769142 -0.215756742257673 -0.215606766092743 0.376867765700299 0.0503315532157829
Rv2520c 1.64198936630865 0.129724505049626 0.0536751172515563 2.96702179815887 0 0.536516685184406 -0.330776744140553 0.73489823135919 0.47831981953873 -0.963543205563245 0.340421452281246 -0.548991123895795 0.339716124266193 0 0 -0.0997432415088575 1.59378311169496 0 0 1.01842252221698 -0.6074367320539 -0.421754929871854 -0.477998921336648 -1.47255174208697 2.72413080760144 0.760324877606323 0 2.67115518903587 -0.0844528734447617 -1.19536044582510 0 0.392845624148639 -1.34421672198192 1.22605550973071 -0.785035131859944 -0.474162831254666 -0.198317652372165 0
Rv2584c 2.73557273691709 -0.158083106805845 -0.879905786193616 1.81771519587249 -0.098805538292666 -0.198547585761657 0.5616279144059 -0.360689555992572 0.408751197749808 0.436430538604453 -0.786709191424165 -0.0496737608910404 0.341918902566014 -0.00970827922444342 0.124631388852056 -0.983670885550653 0.294486162390245 -0.00970827922444342 0.959069538165103 1.13913269548406 -0.452629188741916 -0.890868370947546 -0.721031819794485 -0.375526452920871 2.38806299084334 -0.210791922487974 0.428866267101259 3.50124568878951 -0.124584249212137 0.136919617076361 0.634927675993464 -0.7226778567059 0.522418547668811 0.893978420512319 0.517473656705597 -0.0942546692811113 -1.37152352504795 -0.258470298942068
Rv2645 1.50441322010826 0.0370170709036994 0.430591472846314 2.4056143685434 -1.36520375679277 -0.57870202202574 -0.817720329859961 -0.296981469929719 0.0191240835618985 -0.0497060060768518 -0.891768938691224 0.228088705295218 -0.104183639277759 1.95743856314087 1.60354369305009 0.0077115520493447 0.553450998259613 0.6036287374014 1.72986651707730 0.801923750869504 -0.420686077396230 0.256139219331498 -0.0170469800167018 -0.214466965404856 3.22573873768359 -0.413902698953582 -0.31871915675834 3.20859546168776 0.147749832112234 0.066075628871202 -0.444002653399936 -0.366213835477862 -0.45332013774418 1.41714710830230 -0.566790997017409 0.0543292333682633 0 0.085846905079257
Rv2784c 2.1662622312889 -0.269259670072904 0.0761828423584665 2.96492638011818 0.131289715825394 -0.555405133338126 -0.448222142185622 -0.195205467972488 0.125476360574107 -0.317779038028337 -0.765401495213018 -0.175269025683818 -0.142316723165470 0.131289715825394 0.131289715825394 -0.0902921159291747 0.617902083276985 0.131289715825394 1.26784501957699 -0.086821783161085 -0.386255213787926 -0.0515066877021312 0.155043802885449 -0.290261309052812 4.26192584819775 2.59850042231382 0.131289715825394 3.90327833360264 -0.254382460699502 -0.231024437671995 0.131289715825394 -0.0338064715308702 -0.570511491350936 0.114208138910740 0 -0.097963848238781 0.00115838577744017 0.131289715825394
Rv3033 1.73309670641758 -0.0438799535823603 -0.55473509243799 2.27206402435437 0 0.700309773986272 0.189170122486185 -0.380647820948525 -0.276891004877253 -0.190323723393668 0.807899401945972 0.136023510592506 -1.03922488806768 0 0 -0.991996687551254 0.487145919435378 0 0.645466716455033 0.0673010283731139 -0.595834510044658 -0.781980127969428 -1.54827465271601 -0.341074443581525 3.4228684022585 0.887176816388546 0 2.01912727038685 -0.157675930211086 -0.371195368966735 0 -0.0538133742813585 0.245934410734417 -0.577060286046786 -0.434691456885185 -0.118874262678785 -1.59863908184813 0
Rv3603c 2.61830759188328 -0.118268534342583 -0.312922211717987 2.00592768931370 -0.809869959954584 -0.131619427113935 -0.559326972364787 -0.0546365349151268 -0.211947243954982 -0.171252173047965 -1.04063907927223 0.285975820650157 1.03472101988280 -0.578006063170402 0.366256010209526 -0.45893511887453 0.478741883316234 -0.265065504648202 1.02729891063077 0.703518865389781 -0.862587132202927 -0.615369370041196 -0.0225618052777022 0.102472085589098 3.44436621337813 1.24936275412601 -0.297557478951310 4.43507153405061 0.196739929569491 -0.408694589862729 0.48036768001003 -0.0119539527085110 0.0926554580617289 1.55179034901059 -0.169663798018865 0.67866307240259 0.318503221679634 0.118756374808197
Rv3714c 1.93692307675898 0.615740188028302 -1.12601074133917 3.12274329451192 0.0897579924328396 0 0.112774222758067 0.272847243413136 -0.206410307643446 0.451080039095794 -0.0461453804742534 -0.426879995008718 -0.228134893193865 -0.276958099696280 -0.622499071623446 -0.772683516602847 -0.222141715276336 0.584355826228933 -0.579475923246832 0.411403598493098 0.198869997281065 0.244218291721522 0.591970013863114 0.368040892097197 5.10048917116337 -0.206685600589183 -0.133619899451368 2.5108626507294 -0.526332428396887 0.0295138998891565 0.668480346642028 -0.0910728659354314 0.272336423918684 0.531408635058438 -0.118428220034587 0.939614861961236 -1.41741734412901 -0.842260021975287
[+] Show/hide bicluster #15 motif PSSM #1. bicluster 15 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0 1 0
2 0.909091 0 0 0.090909
3 0.818182 0 0.090909 0.090909
4 0.090909 0 0.454545 0.454545
5 0.272727 0 0 0.727273
6 0.090909 0.454545 0.363636 0.090909
7 0 0.545455 0.454545 0
8 0.272727 0.272727 0.272727 0.181818
9 0 1 0 0
10 0 0 1 0
11 0.909091 0 0 0.090909
12 0 0.818182 0 0.181818
13 0.181818 0.363636 0.454545 0
14 1 0 0 0
15 0 0 0.909091 0.090909 [+] Show/hide bicluster #15 motif PSSM #2. bicluster 15 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.0625 0.9375 0 0
2 0.6875 0.125 0 0.1875
3 0.125 0.5 0.125 0.25
4 0.125 0.1875 0.0625 0.625
5 0.375 0.0625 0.4375 0.125
6 0.375 0.125 0 0.5
7 0 0 0.125 0.875
8 0.125 0.75 0.0625 0.0625
9 0.0625 0.0625 0.375 0.5
10 0.1875 0.3125 0.3125 0.1875
11 0 0.25 0.6875 0.0625
12 0 0.375 0.625 0
13 0.125 0 0.125 0.75
14 0.25 0.1875 0.0625 0.5
15 0.75 0.1875 0 0.0625
16 0.0625 0.0625 0.625 0.25
17 0.125 0.125 0.5 0.25
18 0 0.0625 0.125 0.8125
19 0.1875 0.75 0 0.0625
20 0.1875 0.1875 0.625 0
21 0.5 0 0.1875 0.3125 |