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[+] Show/hide bicluster #13 rows and columns.
bicluster 13
Mycobacterium tuberculosis H37Rv
14x37
[+] Show/hide bicluster #13 rows (genes).
bicluster 13 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #13 rows (short gene names).
bicluster 13 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #13 rows (long gene names).
bicluster 13 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #13 rows (NCBI RefSeq gene IDs).
bicluster 13 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
28
[+] Show/hide bicluster #13 gene upstream sequences.
bicluster 13 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #13 columns (arrays; conditions).
bicluster 13 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #13 ratios.
bicluster 13 ratios
Mycobacterium tuberculosis H37Rv
14x37
GENES Amikacin Amp Antimycin ARP4 Ascididemin_Natural_product Cap Cephalexin Clotrimazole Econazole Eta GSNO GSNO_KCN H2O2 INH Levo menadione mercaptoethanol methoxatin Min_med__succinate_ NaN3 Novobiocin Oflox PA_1 PA_21 Palmitate pH4_8 Rif Rifp Rox SM starvation Tet TLM Verapamil X_124196 X_59 X5CL_PZA
Rv0931c -2.48240320124580 0.00231384602967809 0 -1.02715278644209 0.0675667912626269 -3.14628716102229 -0.204767190124911 0.437677344332492 0.516731455259516 0.0306801103729371 -0.0474595471496115 1.69017102699190 -0.895446362487616 -0.181901083333758 0.0279175230146227 -0.663460543216121 0.00237302631615180 0.147426728482662 -0.13574720615034 1.15429997067954 1.32533199973366 -0.288381980392714 0.702535173270694 0.605085186972334 -0.240235288500864 -0.365348267175123 -1.15549015358855 -1.08648593764963 -3.67483543687875 -0.528770438365291 -0.893442257193134 -3.43463730920345 0.298066967537251 -0.243714359503083 0.433930345688523 0.018853134075827 1.38056959139575
Rv1133c -2.11281887999245 0.398172362422425 0.489353642485843 -0.939581975186914 0.0300049963971918 -2.37001950151655 0.572509506275503 0 -0.503839033254281 -0.135150303632546 0.187747580164100 0.453451818234806 -0.249776047795406 0.667691651044609 0.438315162622046 -0.696983033269213 0.468277840216620 0.0853198952441098 -1.00484813754041 -0.0181709318224600 1.05746702014191 0.0367135004961813 0.700353417867208 0.543590544402889 0.221303389661289 -0.264635544296686 -0.934670362887666 -0.266002179478003 -2.96680405588866 -0.187525931224989 -1.65035085145292 -2.85804477709578 0.25506167673785 -0.310793011103883 0.71900610622595 0.671179627874298 1.35257960538017
Rv1306 -2.59084844534167 0.43505903749592 0.222354260267636 -1.97816716840084 0.0542333309959419 -2.50055973737043 0.206160336311955 0.235906921998977 0.21577874050925 0.222823471239438 0.301838552216764 0.622632397639662 -0.44233982543117 0.448736787019646 0.303536243003116 -1.33734307854689 0.280845106664058 0.057869221347256 -1.35521258552347 0.676765063689877 0.272207999977109 0.0483106225012149 0.652726584058266 0.69129607895467 0.0896138371501474 -0.747516019145322 -1.66692489112069 -1.81055782167462 -3.51136209093759 -0.510449897752714 -1.88534955579015 -3.52329590940668 0.432445902467283 -0.084682774458202 0.91704860999005 -0.0392601144052042 -0.375272388767533
Rv1311 -2.18000311134069 0.739408457185562 0.581511432803599 -0.254270861135186 0.318876754328112 -3.43250838618578 0.52344073722094 0.445540456801573 0.517037591571745 0.491417618992503 0.571496967006368 0.660970261052168 -0.467569663843037 0.647976706858696 -1.10187160803068 -0.845960313412172 0.388520993883335 0.227705016229026 -0.176369120679256 1.01452940427080 0.372163529181935 -0.0564410898234623 1.19354409641234 1.06143887675648 0.41500418402784 -0.443582976695459 -0.190728741919304 -0.127667579031548 -3.97827606486521 -0.570013402936299 -0.393957098788376 -4.28280371085041 1.07592310503888 0.294722530626054 0.761572717609138 -0.0493340375161016 0.333042048082269
Rv1312 -2.72051729926417 0.8373751513395 0.650659048137824 0.269511163034507 0.436281837017442 -3.03648964406373 0.169628360506574 0.46657450550969 0.319867794897901 0.132489036362259 0.297342699977287 0.274948718396340 -0.574100852208424 0.38342206313489 -0.906809736967199 -1.28064847198577 0.213743989417243 0.137131222618065 -0.233374584346563 0.798282984989468 0.433720890386165 -0.657498367398404 1.15960717941384 1.31424604863599 0.804207186870487 -0.192766445692216 -0.137745461055971 -0.0453887664219192 -3.04038465736028 -1.23764552402913 -1.10526061557934 -3.11698217601927 0.645432263733855 0.262162684349175 1.08472899247684 -0.0226153168016483 -0.166969463420515
Rv1422 -1.84742395077058 0.36226753179078 0.47587010765598 -1.38109032076792 -0.283736020720131 -3.10385231283735 -0.183975136603451 0.0700473087983376 0.328592987960280 -0.227760016732148 0.05268128119234 1.68160593583087 0.518647009958697 -0.108332672484411 -0.419999065357931 -0.257786109863205 0.231765754075628 0.544001275913457 -0.94037257065076 0.978487256188417 -0.126774422071343 -0.154185833226338 0.546549358090083 0.321564219814227 -0.262616010359598 -0.242760544265813 -0.806835954849216 -0.627102310952139 -3.79539673787362 -0.676481326511299 -0.418485867258587 -2.93151506401566 -0.287818144700794 0.419662292525181 0.467229483947409 -0.65129072756375 1.56455891510758
Rv1596 -1.57950750309460 0.350137431726259 0.234522259249683 0.518669678024648 0.565849707604492 -3.05927466906971 0.481655993813611 0.253356194831504 0.179671347523402 0.896887506999984 0.0270295753563262 1.43066895298238 -0.179040217939413 0.81264286791157 -0.456712600550837 -1.31397598866936 -0.462384848400258 -0.00831540920895942 -0.76089957604125 0.732543578010136 0.122747373508727 -0.434564637393353 -0.105229791012398 0.396260922485238 -0.450061680830523 -0.0830185822419882 -0.83794556214294 -1.10205743946429 -3.19129918977353 -0.480674709717316 -0.286317564058918 -3.17459653987227 0.527800922005199 0 -0.0100699906109789 0.25866852140048 0.497863454634179
Rv1821 -1.73095482554150 0.412554638188666 -0.0404682640941839 -0.194558695411723 0.89474597933853 -2.57678227982397 0.339201457129524 0.591242664617749 0.944703045283703 0.662441492838829 -0.348591990803854 0.165718689858297 -0.858598948910796 1.03748222422449 -0.708145951924827 0.301457492994739 0.265379116096196 -0.207001294884614 -0.590664161552345 -0.439008556858146 0.442499537552682 0.384762301409146 0.319970731069756 0.222372316826709 -0.213724682186649 0.0652789092433006 -0.546182415834599 -0.510968580023274 -3.56362265636533 -0.594008687807043 -0.353565119101135 -3.31572174341605 0.459474489067789 0.888072644590276 0.331066510512275 0.910534927431858 -0.0644969239618568
Rv2195 -3.33427005031472 0.171929480558128 0.109054539313241 -1.29039909266166 0.0423958192506021 -2.81722269734091 0.0794698732724557 0.517359601422313 0.553641363800884 0.8578956746316 0.319313441173116 0.609802088177944 -1.10855182025742 1.06761871909571 -0.547914025987071 -0.567081112321953 0.236918437666627 -0.188925366241481 -0.229724795651460 0.848585961385758 0.196133139161871 -0.652648849007557 0.404433132478753 0.353616202307 -0.214144041484202 -0.265764710523390 -1.73041498921255 -0.607091123701241 -3.39440243582421 -0.630643917779464 -0.667075362623727 -4.03848861640743 0.573629075455475 0.0869699395116773 0.368427311854972 0.200374109845685 0.442638965852591
Rv2196 -2.61469740373577 0.398540893178629 0.21330554464624 -1.51854013581978 -0.193101073337348 -3.59383887128343 0 0.421885501074786 0.294907132030432 0.923834560495942 0.320118570503808 1.09308175970822 -0.813104880914638 1.14432846295355 -1.09187399168227 -0.499558478079928 0.343716913793011 -0.0400248723358386 -0.827148963207552 0.679673802725277 -0.00840999028566563 -0.916352079550693 0.568827339419173 0.417939323011536 -0.195887774520819 -0.225516906534644 -0.70107513760776 -0.70458859450615 -4.16731692506566 -0.809229919922669 -0.691028191761527 -2.39183220096188 0.693527985071402 0.178799548094373 0.521715935294429 0.172322320676055 0.984419837176114
Rv2475c -2.13880474453651 0.721368983861169 0.244032251451254 -0.58918557421456 -0.252172985332047 -4.03134299427896 0.100159122218796 1.02278030531131 0.819295024046135 0.221464603789589 0.390104091735750 0.71385382908273 0.255032597435259 0 -0.366611290430367 -0.81578436707273 -0.13303520155327 0.504703759000882 -0.775628793438895 0.692965862639358 0.675503600483795 0.0915110413390216 0.134601465284736 -0.0494736556218035 -0.0213859410478599 -0.430312478912192 -0.499393288985878 -0.310948497827988 -4.04657798537385 -0.802474282698656 -1.58872294453067 -3.68285139973434 0.302013362181162 0.354404175035611 0.425091180599489 -0.0958944336349918 0.242937590978986
Rv2476c -1.64221511406570 0.262968309976696 0.339539374073801 -1.32111679121902 -0.139350904588241 -3.26955334442027 0.083986932555892 0.593536738300111 0.988068460502484 0.362199021967182 0.420592815640814 1.07116758879907 -0.285485116190852 0.00290427015799960 0.0864179111460162 -0.833668829036287 0.224867454214782 0.470883437886262 -1.41750613537677 1.32385025035362 0.565133385506849 -0.0725728295380348 0.974502748446147 0.872504842528302 0 0.0703227199885464 -0.172591241200905 -1.36662971075614 -3.95714071186486 -0.666707961953042 -0.796781704235738 -4.25548475146389 0.307732755391179 0.378954021310354 0.491923307342818 0.161798200504325 -0.548254383408005
Rv2553c -1.92063663388226 0.342969393819164 -0.00201039138244172 -0.910230614564198 0.269121487625055 -2.3627018850145 0.0277948072434072 0.124241746986146 0.098292559818857 -0.0787837365470384 0.140740430625066 0.557474025986079 -0.662425364725574 -0.00536307992857514 -0.509211009103058 0.0226159004090540 -0.0971113377025069 0.185261485334817 -1.79913191054472 0.462717542020880 0.725840808535272 -0.245909741491772 0.0375638697192049 0.142595249508049 -0.473039137045873 -0.683182089727737 -0.860132385707035 0.0238331044126069 -3.27655848779952 -0.0272999432737481 -1.33551625719036 -4.56133979113121 0.00790018617495798 0.222866072071450 0.455740848089705 0.086004578486952 0.0151734849896523
Rv3193c -2.13386475459842 0.398179826361032 0.169536994290411 -1.19565225968072 0.451503790635767 -3.55158993254903 0 0.358254576197224 0.254500074320228 0.055708716268718 0.45245196389415 -0.0407388169618007 -0.773088260882303 0.376795319584305 -0.454363503264198 -0.209909379270513 0.219425666728839 -0.0136294599432022 -1.45568307424994 0.232048810651258 1.80093085259820 -0.0856746916114223 0.277018507917005 0.707811775893243 -0.540849482866256 -0.963610595485145 0.186060818245059 -0.346606177946977 -4.15758111419685 -0.573810375650586 -0.8026092740567 -2.27193485499498 0.438858621057064 0.075092771585076 0.475818834022454 0.379575802339379 0.311695965120921
[+] Show/hide bicluster #13 motif PSSM #1. bicluster 13 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 1 0 0
2 0.111111 0.333333 0.555556 0
3 1 0 0 0
4 0 1 0 0
5 0 0.222222 0.777778 0
6 0.111111 0.333333 0.555556 0
7 0 1 0 0
8 0.111111 0.222222 0.666667 0
9 0.444444 0.555556 0 0
10 0 0.333333 0.666667 0
11 0 1 0 0
12 0.222222 0 0 0.777778
13 0 0.333333 0.666667 0
14 0.333333 0.222222 0.333333 0.111111
15 0.444444 0.111111 0 0.444444 [+] Show/hide bicluster #13 motif PSSM #2. bicluster 13 motif PSSM #2 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.1 0.1 0 0.8
2 0 1 0 0
3 1 0 0 0
4 0.9 0 0 0.1
5 0 0.4 0 0.6
6 0 0.5 0.4 0.1
7 0.3 0.2 0.2 0.3
8 0.4 0 0.5 0.1
9 0.2 0.8 0 0
10 0 0.6 0 0.4
11 0.1 0.8 0.1 0 |