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[+] Show/hide bicluster #11 rows and columns.
bicluster 11
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #11 rows (genes).
bicluster 11 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #11 rows (short gene names).
bicluster 11 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #11 rows (long gene names).
bicluster 11 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #11 rows (NCBI RefSeq gene IDs).
bicluster 11 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
42
[+] Show/hide bicluster #11 gene upstream sequences.
bicluster 11 upstream sequences
Mycobacterium tuberculosis H37Rv
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upstream
[+] Show/hide bicluster #11 columns (arrays; conditions).
bicluster 11 arrays
Mycobacterium tuberculosis H37Rv
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[+] Show/hide bicluster #11 ratios.
bicluster 11 ratios
Mycobacterium tuberculosis H37Rv
25x37
GENES Amikacin ARP4 Ascididemin_Natural_product Cap CCCP Clofazimine Clotrimazole CPZ DCCD Deferoxamine DNP DTNB DTT Econazole GSNO_CFZ GSNO_CPZ GSNO_KCN INH KCN Levo methoxatin Mtm NaN3 Nigericin PA_21 PA824 Procept_6776 Procept_6778 Rox SM Tet TRC TRZ Verapamil X_111895 X_121940 X_241
ORF06170 0.935225410130523 -0.633688862332985 0.476982899018312 1.74560218191239 -1.25104466056113 -0.287192232845832 -0.096021430492755 -0.90829113266058 -2.94116524587979 0.324489921611188 -1.73197566593632 -0.134885762455638 -0.372532760509469 0.481624171794188 -1.52346509006728 -1.18831303553841 -0.510427779494812 0.940111540843332 -1.51469040388737 0.310083145252583 0.403800836213863 0.69401032388839 0.0989484592906118 0.190964132020261 0.0451961181055607 -1.33082599705321 -0.213295481765275 -0.609331805040616 1.65013771845791 0.0976069167020315 0.679652178357246 -1.22835839754466 -0.126083827852469 -1.54504659253432 0.250360449495090 2.05954460539395 -0.134926547932458
ORF08434 1.3666948242199 -0.138816341185507 -1.03504360566764 0.513547355155289 -1.43716159859950 -0.82344919810924 -0.404191265349549 -0.0848960640891526 -3.919479951143 0.191200085608364 -2.49719784786179 -0.5695503581186 -0.124023665133194 -0.537475824776989 0.262750613719797 -0.0492064930934479 -0.589050439123688 0.105382414007784 -3.10795807596672 -0.544643553131771 -0.699523726445124 0.799512954803109 0.342563851380117 -0.390638372662595 0.254555724676214 -0.350065189621288 -0.688365115439938 -0.59496593977574 1.01957694902768 0.155576221095740 1.98254482925788 -1.03199630705428 -1.50602512572502 -0.735728914858 -1.31860415548211 0.637650912910541 0.0267265629527008
Rv0430 0.40026673375233 -2.61823374631060 -0.955311913189677 1.41857942162438 -0.721025642026284 -1.69692760783424 -0.296454912644918 -1.15050148446563 -3.16170805346278 0.804088323639669 -1.75079035161746 0.86180423151804 -0.95191652659926 -0.462130986357838 -0.76803248415032 -2.29041466818682 -1.91673450685011 1.26609698352277 -2.30292072815271 -0.180779536964094 0.158366046397393 0.223625519550226 -0.562439091502838 0.225882144131477 0.350050832877258 -1.41903752681681 -0.286635004347359 -0.309653653806396 1.7817333482446 0.168537748323817 1.36272033405321 -0.403745648814818 -1.93064652844715 0.356345993820549 -0.987320826192555 -0.217804332460657 0.0318736791519233
Rv0455c 0.855227487794975 -0.431792697463299 -0.442590265647042 2.65540756378379 1.38386600806446 -1.19314315398699 0 -1.03519790973808 -1.60750155406223 0.414679987659906 1.41833591460542 0.123945421221752 0.434377502830811 -0.0589472178674938 0.288410271523823 -1.63635770075762 0.0935170760759915 0.779082111199278 -0.981763178597393 1.76446701850658 0.109663887464774 -0.427909854173068 0.65633841699081 0.805699318394631 0.544674766547212 -1.46215863586927 -0.724687195628639 -0.611227716336672 2.50069319028491 0.807263732094581 1.33535595162806 -0.361101650205724 -0.822897418063563 -0.351774334323952 -0.0956812465364156 -0.35245543169856 -1.51844243186408
Rv0871 2.00726891328024 -0.96467032671996 -0.397693467358316 2.08587632236759 -1.85861572560676 -1.26873726536509 -0.0404233900243739 -1.22860797997089 -2.88298312582143 0.462477976562093 -2.00704966959834 0.0538503145077003 -0.897575208684452 -0.359578144899369 -1.04995468038601 -1.58572075020823 -1.45084875164219 0.732423204221177 -1.28073120879545 0.546813311226762 0.195842426955122 0.537643829855179 -1.32435145549743 0.64076362605982 -0.996801636774345 -1.78368182545673 -1.20089053026436 -0.15370805949597 2.99867386017951 0.622473983286718 2.48418941116593 -0.603843194290064 -1.61806265571065 0.24489974525523 -0.274807570392262 0.382323803205095 -0.613321673197308
Rv0948c 0.0358700438092505 -0.719964664803837 -0.217312791855201 1.17709243706100 -1.19780079685047 0 0.239268352652713 0.132183111039459 -3.56058730206082 -0.105334581186235 -1.58361608602524 -0.354718954469266 -0.874983729635915 0.278294026628077 0.0292883204246819 -0.131435848236829 -1.48353388215979 -0.0570115648598274 -2.20744266346422 0.0249898943939492 0.0405392537377834 0.326766661895946 -0.537759428550878 2.43369530544116 -0.521521039731921 -2.65488865273948 -1.67647282716072 -0.200321632183887 3.39241622472391 1.39311914078945 -0.227010648740002 -0.716157176477903 0.298912165691387 0.855715049480754 -0.320958156297479 -0.0419981545739374 0.349997496059386
Rv1174c 1.69773803919487 0.148059541172609 0.536015471180653 0.433544338174762 0.335659263521709 0.749636096803571 -0.839163824848315 0.805027013075466 -0.276720262265657 -0.200909222884093 -1.29530531419800 -0.468494178996174 0.0170979833449798 0.0238560041530647 0.178163876133957 1.00920362775204 -1.01067907969546 0.537416796816954 -2.08598357542368 0.00674854146281116 -0.499247376499582 0.0105803318432040 -1.13313964895630 0.854232829031428 -0.61832559857251 -1.63173475686826 -0.132972985261943 -0.715456300681545 1.62817430391886 0.406100567520412 1.49827979578976 -1.5516408420043 1.24868194215102 0.378811807248519 0.342913595958495 -0.474445637896411 0.608005988108434
Rv1176c 0.694978495406039 -0.157748833482498 -0.250958802995118 2.12288675152466 -0.744453813878449 -0.831447982192504 0 -0.60110059857755 -0.938523731564042 0.285590695429104 -2.38528087042009 0.691318013554326 -0.752305043534691 -0.920941221013475 -0.812405640957917 -1.05293167308281 -1.85116141405665 0.68658152600629 -1.41107388964771 0.329631202904203 0.754921845318169 0.375889170965319 0.334648210088265 1.35502957041474 -0.103275432465793 -1.61361148703819 -0.942504131200781 -0.530862514051153 2.28859931119682 0.664611620844635 1.67588794454591 -0.833847253226976 -1.02331302629275 0.512331915391137 -0.615361077611368 0.220326319675789 -0.21674793593116
Rv1192 2.20105624618794 -1.61879175647841 0.291195778578655 2.01320469100072 -1.13920085170437 0.420641939613821 -0.285372367325690 -1.23969219270977 -3.13328708479863 0.040831688239363 -2.91533102815018 -0.0701402954795148 -0.112718762750991 -0.149534551929445 0.0265033192443184 -1.77032044562207 0.818806944876672 1.91096024689903 -1.68389480568005 0.696689645840883 0.721125834102616 0.62186613878558 -0.160868677359683 1.27972369361551 -0.314706937313286 0.266099971754458 0.455905783256947 -0.470035090772044 2.06288914097222 1.30163204401454 1.56730388444080 0.0710608582156755 -1.07060974027387 -0.272785251133673 -0.0352748342283713 1.48172328861705 -0.455082637811924
Rv1202 1.29043517261283 -0.820272890693727 -0.587392317427805 0.00116985095990033 -0.76755516941409 -0.583616585901927 0.110114008389365 -0.108271183058271 -3.30700712956685 -0.0917059601641046 -1.74446222795990 0.152061109826842 -0.793237920885166 0.0864707852069056 -0.701648779934731 -0.747922140437704 -0.687810055949513 0.617316115809844 -3.37198984226468 0.525672853889483 -0.210256081905520 1.10300245169825 -0.812616634036743 0.0689419786241104 -0.952280294208812 -1.42629855709537 -1.38941764272999 -0.673933686880406 0.978080551579875 1.46225192447387 1.97921466914645 -0.872258334959208 -1.79538749733652 0.0231540250995053 -0.45907622085251 0.298871639536692 -0.449468633255378
Rv1444c -0.0575226790161425 -1.38504015259955 -0.160377259055194 1.35051155494304 -0.757106942766246 -0.761483245658933 -0.0112439182993859 -0.460949925964458 -3.60435527395856 0 -0.822545752016654 -0.0578280893052797 -0.58615244598332 -0.186629257465324 -0.291529968198157 0.349847899232605 -0.86003491634147 -1.21995304385286 -1.75599282256138 -0.339007849535007 0.604806774889144 1.04288788791288 0.202464240365085 1.64978313455889 -0.661038259174084 -1.14221559782531 -1.56839836468865 -0.123680423704835 0.953894191810325 -0.621427457106382 0.699117668303038 0.348310086690087 -0.781636560305217 0.547051427719066 0.0164349054925939 0.150882700483833 0.103046824750508
Rv1528c 0.826302906561272 0.172969811492856 -0.255358532592460 1.28888607197158 0.426454853584067 0.0133037800240289 -0.547552976983474 -0.0306361169806577 0.290724002963416 -0.0871118132192928 -0.199916882199088 -0.169055446355379 0.478754557942199 -0.261221327252073 -0.93357020074253 0.285468584506938 0.748699986153792 -0.494128543210062 0.172974432550232 -0.231907118781885 -0.817420182751891 -0.514203175889766 -0.502095792862905 -0.731408790837964 -0.112922720950780 -0.0213525085799295 -0.595091615664212 0.62878510808745 1.74872873016529 0.837322581058762 1.24100363710749 0.29868821934521 -0.102938789432429 -0.321684291987167 -0.444343188374957 1.83705640124963 0.318762796602184
Rv1637c 2.41564540390838 0.360122232583491 0.697658992488199 2.34967388349704 -1.16873522608149 0.652784609446434 0.136949766621636 -0.162195716857971 -2.10806272695643 0.46973751150432 -1.72443197231002 -0.197419604849166 0.130365466831754 0.678944813545863 -0.0710714347221336 -0.181004962045297 0.0528938596381319 1.20102146589925 -1.12016751729947 -0.333964065952994 0.379479886438178 -0.529922499511301 -0.169669194228033 0.467376282727914 -0.794709531151895 -0.572510883742438 -0.845669551281852 -0.304496443229007 1.55940893666806 0.269853977827465 2.17876854659171 -0.805254601288057 -0.371244122014644 0.812246106669571 0.443076030845033 0.815803718436246 -0.63613534606315
Rv2329c 0.873423775232931 -1.63100216467927 -0.184652192442718 1.22706427506249 -0.844613968572257 -1.29367401152416 -0.0266558612939237 -0.910671791739975 -1.35248224214844 0.311495259966333 -1.62588849030063 0.322575355976696 -0.155905235755523 -0.262787623592202 -1.30650836893519 -1.81591384801833 -1.06749870061972 1.19943146288858 -2.30309292093575 0.657326388366905 0.161975339567841 0.513776436139208 -1.94592025169047 1.21781633065169 -0.730473309309243 -2.39760634654584 -1.18635254266758 -0.0881638191780805 1.33500118115351 0.893090588307214 1.45473199475487 -0.625584351681584 -1.25816888166678 0.0345433426690436 -0.231954304006224 -0.377373725217628 0.501987426500143
Rv2375 1.13730352520203 -2.06948589690947 0.412233148890355 0.672993379169717 -0.519648696033566 -0.756467428944819 0.632202699415452 0.305606542116506 -2.27863469412744 -0.269764770147558 -1.34899685482193 -0.0163856021870711 -0.369817359994544 0.469892490342234 -0.0579355025637302 0.671234707912617 -1.61800356702188 -0.0265688093290377 -2.54050738174020 -0.373459465809332 -0.0456659362401114 -0.787410772692199 0.392249555198564 0.218410309855846 0.133517392853472 0.303458848533513 -0.644855614163923 -0.769418546329594 0.9554620943069 0.481530369564009 0.874055572469943 -1.24209255032985 0.439944529671344 0.177998197973235 -0.564091349308881 0.431398212319875 0.396193054692964
Rv2387 1.11923674331824 0.0847091286929931 -0.0356498672944334 1.08253045155737 -2.05459484495479 -1.29708913869900 -0.0217613056760948 -0.718187973532936 -1.26616859520435 0.426466306259142 -1.97750614718891 -0.414644711179562 -2.01197918383941 -0.772787663991962 0.107948442397423 -1.85129670673977 -1.83163047954727 0.206710181599017 -2.00692221401979 0.518218008969685 -0.471173183184641 0.571447591694406 0.107948442397423 0.333557277493556 -0.628091569827073 -1.21142384295088 -0.596310918182444 0.339226239643552 2.2854327611356 0.527606878663496 1.30856564836163 0.0890051482505435 -0.4398577900833 -0.156799242526574 0.218193516672623 0.0782454310344049 0.358169818232352
Rv2412 0.92637170172141 -1.22286710190316 0.0285869284277852 1.80362407936185 -1.46976880033277 -0.78362532480999 0.0939488316872406 -1.03448377867368 -2.51144097384487 0.725787643763045 -1.90728868039592 -0.233430897945229 -1.39276231398360 0 -0.689069350613294 -1.67184965197237 -1.71928814511812 1.26428645114131 -1.58571860451326 -0.235018130004922 0.168012158453391 1.26587848744408 -1.30886370004376 1.19734424663169 0.300372778977129 -1.83131690340800 -1.34430433769240 -0.112179134692572 1.59222925363795 1.77196634105485 1.61511291654181 -1.72047339741318 -1.28690371457298 -0.239911027546659 -0.0956680797942042 0.828866968183045 -0.610875774136418
Rv2450c 1.52489758163914 -1.53771621169261 0.681754194637959 1.25309214470928 -1.63007037960997 -0.912921130033817 0 -0.963360263341608 -1.58974604047490 0.672142948462405 -1.57688032677091 -0.192684318684361 -0.48424293998243 -0.198164984019791 -0.401833985996555 -1.58898902419036 -0.386536204971108 -0.595674097708664 0.0300687432170099 -0.191381843947983 0.725891734530325 0.649479781607088 0.568018221908015 1.80205353127678 0.227688387189875 -1.16431479862998 -0.92920058173585 0.165798879204911 2.46634890029829 0.457677533099869 2.04096466520174 -1.48051071152783 -1.59313256731621 0.00500190424605276 -0.415038502526988 0.922428630317488 -0.137370955799783
Rv2459 0.125953480604325 -0.205710389583383 0.305257540950798 -0.4122006845414 -0.748375767712633 0.156782337719762 0.414078773759631 0.0131273342804426 -3.36934703800622 -0.0968013494634657 -2.35213822336319 0.322374651826805 -0.369771854556399 0.3794157563812 0.896189475054214 -0.388142373616635 -0.924075177401116 0.468839092761715 -0.481976188869899 0.412878825011641 -0.125189111958617 -0.144428911672325 0.0758623071328125 0.852112856140581 -1.37238811148952 -0.494540761207668 -0.93220002893757 -0.0935450143547434 0 -0.597706548746035 0.591520363142188 -0.32461895755951 -1.83092011683954 0.574546847512627 0.865376684024338 -0.0604799448558333 -0.129340727619182
Rv2764c 1.53464032675760 -0.239909340891673 -0.598543827334194 1.44541582669154 -1.55806134460253 -0.568143289433908 0.368534254932321 -0.881741080723399 -2.34856000761007 0.307247829942147 -0.772686951882409 0.506167539533805 -0.547717487364316 0.364678012798921 -0.167617044483256 -0.752951291303457 -0.806814314109006 -0.556992777460913 -1.54091147328139 0.193680196792395 0.304553215950978 0.258107125235808 -0.341735043821053 0.287728406304486 -0.492064493481193 -2.73803630056894 -0.96671922233897 -0.821584710179475 2.21923791106042 0.0880541204077115 1.73504252839537 -1.04433351757151 -1.61122452248202 0.681629645507685 -0.0520369663666985 1.48903466932676 -0.732121992593553
Rv2892c 0.211232054275464 0.0552787138434017 0.211617018087690 1.11290010697683 0.523694246196122 1.37519275530595 0.976436087684636 -0.264387885222463 0 -0.365311361633488 1.25298895080055 -1.31780120452423 -0.818421704063626 0 0 -1.98071980522617 -0.969428732482252 -0.185205997408614 0.420159437455337 -0.321430419843261 0.182539381333083 0.340905473987978 0 -0.542894603894231 0.361745558654524 -0.473091579595454 0.159959875576019 0.490386384113951 2.06707540886775 0.249092354398405 0.595876416874663 -0.340658097260742 0.234316693989119 -0.921851147954448 0.344616864197531 0.746730317743057 0.207316472430251
Rv2971 0.597065780700125 -0.738025519326863 0.305821118453879 1.18026644590742 -0.941836387931425 -0.271001210294321 -0.632529941112863 -0.848334491838878 -0.869342708049065 0.426598191184474 -1.1762634348569 0.915372712880426 0.095198955843915 -0.527789718546649 -0.369355003328851 -0.932320721258702 -0.685443564093204 -0.202792093039104 -1.6503625398682 -0.0321921159434943 0.318948123227118 -0.25935337567094 -0.192096785928573 0.740117505139011 0.732374906926091 -2.23316310685973 0.165519094506227 -0.321323943616749 1.18836058125358 1.13471890069827 1.12627413083138 -1.18089511949216 -1.68710834122647 0.963469605072807 0 -0.760301798914023 -0.385852152787163
Rv3194c 1.19058267373635 -0.9275715229341 -0.288488011250044 1.87767752505861 -1.29035590632896 -0.92684785369869 0 -0.765002309086313 -1.95965523467982 0.555216879282258 -1.93965436745244 -0.114693703310198 -0.707115522893864 -0.238507756270359 -0.514497852284831 -1.21418115900787 -0.92834579982119 0.029736546657354 -2.75319153710716 0.427249115201172 0.309784355178558 0.425591303727829 -0.113346195014173 0.0776848657183194 0.191178452163316 -1.02227212860116 -0.666247520827829 0.116795932562874 2.94454889487139 0.288199927797253 2.1954290909492 -0.179867746257820 -0.477130174348366 -1.15348762658539 -0.384948916814381 1.62873494100174 -0.970659160810817
Rv3628 0.769156991007308 -0.843377125061755 -0.585952075031828 1.98050163402971 -0.561112770435261 -1.29768332903032 0 -1.23916645509669 -1.94388090081585 0.772189443022952 -1.17845687848817 0.383874760349753 -0.636861018256793 -0.397724075046172 -1.33148330769333 -1.34015474679969 -1.56911420645414 0.553207431752737 -1.99199498772019 1.31724412888041 0.151608633339169 1.18335233933349 0.110023407547877 0.397585648999845 -0.566776262798367 -1.60157630762580 -1.08007165208716 -0.0491430857467448 1.79909211908976 0.566552903040721 0.832628025075713 -0.631480794312751 -1.52007744676307 0.310368840760567 -0.59413117812203 0.5472742574729 -0.829961520526399
Rv3686c 1.71221541463178 -0.953248603471526 0.104885861935759 1.81962159508281 -1.70084949980861 -0.382013688748 -0.0862746191623526 -0.859485334719892 -2.58111372406668 0.417655798743649 -2.54326022665336 0.368712216323537 -0.641353969412494 0.127908103643809 -0.0889329382563797 -1.57558362845588 -1.33322882482217 0.78067059200334 -1.70216610633674 -0.0358484979897362 0.341271411324836 0.222789194825751 -0.671766956996878 0.472889017973786 -0.639045801630824 0.0520449987990746 -1.29940147287628 -0.319177440093200 2.08400592135109 0.193171123626574 2.81056133960223 -1.05932896958298 -1.49362944278205 0.847729517442378 -0.0929772377726789 0.532348817321579 -0.068316323975404
[+] Show/hide bicluster #11 motif PSSM #1. bicluster 11 motif PSSM #1 Mycobacterium tuberculosis H37Rv 7x4
POSITION A C G T
1 0 0 0 1
2 0 1 0 0
3 1 0 0 0
4 0.875 0 0 0.125
5 0.25 0 0 0.75
6 0.625 0 0 0.375
7 0.125 0 0 0.875 [+] Show/hide bicluster #11 motif PSSM #2. bicluster 11 motif PSSM #2 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 0 0 1 0
2 0.125 0.125 0.125 0.625
3 0.125 0.375 0 0.5
4 0 0 0.375 0.625
5 0.75 0 0.25 0
6 0.125 0 0.875 0
7 0 0.375 0 0.625
8 0.25 0 0 0.75
9 0 0.25 0.5 0.25
10 0 0.625 0.125 0.25
11 0.375 0 0 0.625
12 0 0 0.75 0.25
13 0 0 0 1
14 0.25 0.375 0.375 0
15 0.625 0 0.375 0
16 0.375 0.625 0 0
17 0.5 0.375 0 0.125
18 0 0 1 0 |