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[+] Show/hide bicluster #9 rows and columns.
bicluster 9
Mycobacterium tuberculosis H37Rv
25x38
[+] Show/hide bicluster #9 rows (genes).
bicluster 9 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #9 rows (short gene names).
bicluster 9 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #9 rows (long gene names).
bicluster 9 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #9 rows (NCBI RefSeq gene IDs).
bicluster 9 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
46
[+] Show/hide bicluster #9 gene upstream sequences.
bicluster 9 upstream sequences
Mycobacterium tuberculosis H37Rv
23
upstream
[+] Show/hide bicluster #9 columns (arrays; conditions).
bicluster 9 arrays
Mycobacterium tuberculosis H37Rv
38
[+] Show/hide bicluster #9 ratios.
bicluster 9 ratios
Mycobacterium tuberculosis H37Rv
25x38
GENES Amikacin Amp ARP4 Cap Cephalexin Cerulenin Clotrimazole CPZ Deferoxamine Dipyridyl EMB GSNO GSNO_CFZ GSNO_CPZ menadione mercaptoethanol methoxatin Mtm Nigericin Novobiocin NRP_1 PA_21 pH5_6 Procept_6778 Rif Rifp Rox Tet TRZ UV Valinomycin X_109 X_111891 X_121940 X_124196 X_241 X_59 ZnSO4
ORF00540 -1.23426126687992 0.525733068462523 -0.439520077483879 -0.0292238910448178 -0.170781111014868 2.72192048704882 -0.335085839719915 -1.03561717721173 0.642324469953844 1.50702017190862 0.761824458502233 0.214829659874128 0.486260585752873 -1.576725190775 0.399386404281483 -0.208804100112247 0.514741640227487 1.09640052579747 0.154285172870794 -0.0471879756256468 1.15349389617873 0.375271209051585 1.11107880644070 -0.59431160386723 0.0374232544477863 0.434613288646237 -0.146756810651114 0.0852989666635341 -0.938681547515995 0.318744505685364 1.16731822502873 -0.362448280834521 0.365986153944544 -0.503143457624626 0.41229615850012 -0.322360690535646 -0.62089226571664 -0.421166172042538
ORF01250 -0.9175083550334 0.958833842054115 -1.78572262653555 0.100419241012854 0.73137441251758 0.130508333461574 -0.500996173138364 0.147515408260283 0.513786225944552 -0.910954460239118 -0.196631390710909 0.767972726304867 0.159142121350742 0.516223777362573 0.454500175368761 0.599197317688478 1.4325845598483 0.396975062068973 0.339160368365728 0.294287784937212 0.251225715835292 0.162723144393341 0.616464187593186 -0.716554809165983 -1.36667682632046 -0.524164981996959 -0.0886866628115534 -1.45132459628557 -1.64874879208855 0.347519310337555 0.239850703775953 -0.286081754746129 0.183459883576998 0.0932063515640996 -0.519881968035278 -0.472045399498176 -0.324211677429928 0.615820626689259
Rv0058 -1.58640573535829 0.551623921148165 0 -1.19230586436959 0.342956187527389 0.346548839250546 -0.459731075943342 -0.114899610941501 0.632886700708083 0.0454036072524367 0.0770574095779445 0 0 -1.00695508516897 0 0 0 2.01471461571487 -0.0121856900407688 0 0 0.138728309288053 0.0699184274793786 -1.69801370687953 0.111897933864483 0.714710367787654 -2.16800258968309 -1.34224361765218 0 2.25923770173903 -1.01546525398528 -0.744229960149938 0.732766414590815 -0.828854123185578 -0.13976674865821 -0.924581700782892 -0.330026604938466 0
Rv0249c -0.864990906624017 0.783771824286465 -0.086226349302136 -0.398261763820568 0.31431214522973 1.19466584804889 0.066085052430715 -0.705206404494888 0.825918865073632 -0.335299409491311 0.35543217088611 0.922929327115931 -0.887567842041778 -1.25878675439073 0.442063843018886 -0.0497316106641523 0.150807224281739 0.561283803956774 0.513027793338148 -1.18062822280749 -0.675778042455815 0.792020805528362 0.582517335012514 0.381949344906989 -0.899593021419104 -0.150565154598644 -1.87307216081820 -2.84185902035940 -1.33783550307188 0.500713147605045 1.42549467662141 0.257205600255218 0.685684202924961 -0.284323052626145 0.61276518848625 -0.537139805049208 -0.00391444923710061 0.866051907355086
Rv0483 -1.11558364714404 0.381195642892259 -1.00508197353439 -0.527391629758754 -0.239297016874498 1.09139793431979 0.49417796577201 0.0620418339221701 0.0598220243776037 0.458453463725445 0.212018365149441 -0.0866951988907405 0.135953680010912 0 0.883045391861483 -0.606024553670696 0.432461032605044 0.549002491797372 1.1796686445148 0.0902030162828164 0.297877637643600 1.10568057268686 -0.632193169192034 -0.580938363641515 -2.55909511877721 -0.639976019815651 -0.00511728294051832 -1.11474665132245 -1.38040982179578 0.606055955673666 -0.65744283071997 0.169638686332282 0.363844384933331 0.381205697958746 0.292085651990704 0.0770138447718345 0.385695619340609 0.375232126859256
Rv0867c -0.29582498782123 0.576494914182908 -0.896000388482056 -0.391005917726355 0.51734708978708 0.908421409605471 -0.0536959338604917 -0.65332761919066 0.854586103726052 1.16119604018658 0.215449991726333 0.809042126385906 -0.063343746922779 -1.17084491253226 0.164391764208088 0.593530377819135 0.820590178458254 0.667780115057343 0.479448869580206 -1.87826928275916 0.597579549408459 1.29316032337287 0.465174027286505 -0.116686219139805 0.448440399654066 0.633561115834308 -0.689243362694073 -1.05072652243986 -2.04617548755661 0.892983077423265 -0.131753908266677 0.259667580351095 0.98209447419761 0.114414586920409 0.944106035606745 0 0.125744900610906 -0.0385254210832622
Rv1013 -1.533919951027 -0.352189246737355 0 -0.864841252005108 0.336559112914947 2.13447758927306 0.541398063789347 0.293420866360035 0.40858848216134 0.283505625543868 0.48565638307725 1.08087845921938 0 0.833237754734105 1.15810647942641 0.472085774332469 1.11526752222024 0.341534118434274 0.477585359720762 0 0.876182367876509 -0.648748678128676 0.622884978782065 -1.53789622435697 -1.04487943902983 -0.0352086793083562 -0.785289365929536 -2.04157260670900 0 -0.145355438023247 0.939390083513593 -0.479596349155181 -0.244934872745132 -1.20239919144623 -0.73030158882838 -1.1566919868182 -1.15543042581147 0
Rv1355c -0.317450631956017 0.220851350628917 0.302989954254792 -1.05220879939457 0.0637579004302048 1.90703375892131 -0.313951685619157 -0.723601792272373 -0.0465031349654284 -0.340934060108881 0.0990717459774425 0.230311523568592 0.439888213954695 -0.370346803793485 0.982127513872732 -0.340906910650729 0.469128363474691 0.253710053879479 -0.689843612075862 0.105676151419364 0.89948554863789 -0.310696798327454 0.117943035164812 -0.207295605703028 -0.523639296792959 -0.0244245975018601 -0.575721595186049 -0.876289448542049 -0.547636914297291 0.208889873812101 1.47338314473808 0 -0.172007959834275 -0.353995613186127 0.117656458539895 -0.474759975846212 -1.21649025204700 0.86251960141002
Rv1592c -0.437276074272867 0.118887569169687 -0.0220524411029222 -0.099656512436249 0 2.56364501678433 -0.163308742156749 -0.885808331217018 0.402196751631512 1.23403410956114 0.934356559485544 0.725587687029077 1.09019143481612 -1.44249706864119 0.178378797259147 0.417485415506855 0.772463644747372 0.87919924812469 -0.163103181965702 -0.243065299320093 1.37016759049289 0.790537655177375 0.867608158605296 -0.785720139452868 0.178443281477796 -0.0881388831010005 0.224689329936401 -1.05094367447299 -1.3120937803712 0.373638778604819 0.75251174841904 -0.511217910033896 0.413188630728821 -0.419861032987842 0.248712970282506 -0.669679279617774 -0.96376759143336 0.311585594512103
Rv1653 -0.854432700743022 -0.0081874449104956 -0.846163829872568 -1.46088553250440 -0.126241058764587 0.183512364162968 0.895662695249872 0.222931853689359 0.0179300513036164 0.272269788212493 -0.40553689768564 0.625662647962513 -0.512761591918856 0.144834517718217 -0.282572078668229 1.19758809058886 0.43891754670838 0.525657214083595 0.681242969853748 -0.378125790006841 0.762307903262848 0.203225479808943 -0.186392412898412 -0.150083266118082 0.246488058452736 -0.204544535213474 -1.58381026745524 -0.0881571823444695 -0.61600811737232 -0.202027331698017 1.99563183224548 -0.333595613990972 -0.0838048036874622 -0.0941035626867829 0.29213451678744 -0.199176656302192 -0.296550590816974 1.38117133288563
Rv1654 -1.92369263973473 -0.0307695712967566 0.545045587373436 -1.96145783235274 -0.585806778556978 -0.388866110302698 0.230238818247003 0.227779851534501 -0.0187903868644783 0.0519763635977956 -0.417617296596435 -0.315709276839707 -0.0896768943219265 -0.306983196770353 0.387543931448007 1.52246809347608 0.252779101889507 0.233123201355292 0.379582447092944 -0.578819771341057 0.594024380417789 -0.212562102278808 0.254357139308903 0.0907734114530967 -0.212724561888575 0.151668342180599 -1.45424585197846 -3.43016109421598 -0.401901064256421 0.484415879166071 1.05538725217864 -0.589385132289266 -0.280313215655353 -0.076189367530634 0 -0.200806842507227 -0.636842326272174 -0.0947743138091315
Rv1688 -0.75442664670161 -0.106263511097406 0.131750591466693 -0.963844803394866 -0.323190551420994 0.593982149152336 0.360504613252385 -0.0894013313872614 0.00567670785582253 -0.322004054068949 0.236297635033357 -0.49431627451418 0.482765788708969 0.300962286560938 -0.789421097851956 -0.334950263316138 -0.483932687463529 0.320164291984563 0.540892239956162 -1.29780314724006 1.13431590786790 -0.382748140235019 0.540269723856342 0.023816086576696 0.650112475619142 0.0623810474548802 -0.415627158078558 -1.06868625957128 -0.0863648144228364 0.433681770060471 -0.746998101311302 0 0.130909812012814 -0.0663787491243635 0.245050507083904 0.164685711193709 -0.0230278931840531 0.183982381612384
Rv1947 -0.287322818786952 0.528568106943979 -0.875333345098837 -0.914892304381791 -0.124776564260994 -0.044482384905744 0.373406982532059 -0.183600400901726 0.175381914161724 -0.315759315159050 0.070158607121075 0.233190545476768 -1.11863776862064 -0.681926555015233 0.394994300571151 0.464312118797761 0.0437360653380807 0.863025539363837 0.622804266379633 -1.17870858254628 -0.241908326618487 -0.356436644836756 0.582910790830122 0.250027953371228 0.113269468083522 -0.219506360398371 -1.91571192466226 -2.46292528384128 -1.75694699273917 1.09204418600894 0.846074402190743 0.0699597318347065 0.0201423081798563 0.112635279137666 0.291703382152287 -0.134676509930683 0.232836114343948 1.06461642307672
Rv2024c -0.189885054339629 0.454943006623125 -0.263962677348206 0.175254679394241 -0.315946993618496 -0.164757551314751 -0.293737434539896 -0.152945762261786 0.355665232072840 0.0999599712481577 0.0430004406828516 -0.167066966337753 -0.115329789818263 -0.303785728487312 0.252686582411269 0.141568567396257 -0.148185149782240 1.80802651529869 -0.13920003186316 -1.06030388572737 1.11506350799835 -0.247498490377073 1.40738853605027 -0.56468512807212 0.154868317347240 1.17757952642586 -0.340566449449276 0 -0.969134075322714 2.06722681337479 0.207474270504179 -0.458714058640153 0.133379067375630 0.301497819921821 0.427358316370806 -0.339308248711263 -0.393676252926369 -0.743730124523065
Rv2243 -0.494507123939069 0.400795517573836 -0.548705545938292 -1.14831790623388 0.0277903824329120 1.43845630873088 0.0252791246231296 -0.442383319470755 0.464817646128727 0.0724572338949964 0.740696275887762 0.599753230711945 0.215138042282270 -1.14431167986696 -0.0684345954298839 0.449298855431743 0.178884401439905 0.441862972237607 0 0.52613327292913 0.564754066361937 0.247123355001842 0.150940435166614 -0.827545786489153 0.0891866401068009 0.0873633904640996 -0.93726753827597 -1.29996334513749 -0.527580783550887 0.304605317755257 -1.38634445201967 -0.158176855982577 0.421204067307765 -0.980270765438882 0.0137511150589245 -0.442852539156158 -0.666982062831481 0.287852878941436
Rv2244 -1.73244419960065 0.919293687608464 -0.0616782891983336 -0.898743795891411 0.736047650310968 1.2927099902296 0.317446653407375 -0.332694125874249 0.522886693872386 0.423014479579957 0.862993395612147 0.848668826091103 0.713986523391491 -1.03346371772376 -0.702809903286573 0.490258634054123 0.199173240299150 1.15695530333427 -0.0394122951670038 0.790842058297411 1.11763825395969 0.702303958561164 0.402643454248023 0.0880352880514199 -0.868630345921484 -0.525263615249167 -0.845709125197521 -1.8031510002632 -0.237128554970092 0.850199758573598 -0.685940251785595 -0.338496831807268 0.638431737031363 -0.574409280147937 0.368650335328887 -0.376220723818559 -0.535153821572935 0.503504469508979
Rv2245 -1.65884437032819 0.048595703177822 0 -1.92196865709175 0.283670408862167 0.754424049892369 -0.229455686782413 0.104593579454014 -0.040726530342188 0.145526434147221 0.795812188759323 0 0 0 0 1.67983077327945 1.90415747393393 0.0647806874380871 0.84101731231361 0 1.23110014830552 -0.236873702704084 -0.287506332110352 -0.367528738196890 0.440937910064862 -0.0998241988366275 -1.77703167408888 -1.73418974689393 0 0.496039864204236 1.50486437263128 -0.24276321343085 0.0663589152829901 -1.08089401040733 0.118907931514937 -0.192365130636547 -0.616374197775866 0
Rv2246 -2.37307752052632 0.648451601934545 0.0068150094185038 -1.97660724789462 0.331253710294117 1.01423915774832 0.393351125257183 -0.392509035532647 0.479863628472807 0.426040625023615 0.476429190619332 0.593544676528814 0.797701376821937 -0.97117864845028 -1.17220447027229 0.43068767897262 0.113259122892075 0.804821116412976 -0.409239006307998 0.628213139723011 0.177397094786467 0.258655590966209 -0.293145367281197 0 -1.25312375982258 -0.407176848298054 -1.77322349443492 -2.03565475888551 -0.403637546303602 0.568726838667158 -0.960632510799767 -0.413338520353126 0.626170483101014 -0.536961959391506 0.500396615101062 -0.500716493752057 -0.303564219054478 0.0981146947030958
Rv2247 -0.387770733345222 0.417662652309433 0.915555102509408 -1.71868994108232 0.494982269574804 0.693645527348684 0.315776913064104 -0.273553011721911 0.0972417541812135 0.50086478972214 0.713519333907544 0.330015206526124 0.764467001921365 -0.581594442490805 -0.616735842855008 0.108820780118763 -0.186475593094043 0.39443942477839 -0.886448092257024 0.598547073661692 0.592535350107915 -0.515753174609771 0.0500317065601018 0.283021074918167 0.32248897360935 0.047298840120267 -1.72567569107535 -0.378983056031411 0.0508183731165093 0.551773148378748 -0.864181384692255 -0.148178943440737 0.353722066994123 -0.410927648293778 0.287967606870307 -0.0345437649238674 -0.0572777066020753 -0.338742575498268
Rv2280 -1.07475386888447 -0.619192165848064 -1.48762676267380 -0.569712744765526 -0.228713181766173 -0.296405981404974 0.241489591237117 -0.776577985940002 -0.329417160068858 -0.779920954390235 -0.466217705670461 -0.494308716906567 -0.728302206341926 -1.34796978077319 0.280379592781696 0.0134555140982577 -0.690746230354773 0 0.654919117500819 -1.23523684424540 -0.0757662642007847 0.0911001518078997 0.693814241482835 0.075151761928307 -1.15023513092590 -0.767602059333768 -0.101792058138563 -2.64830878321819 0.459307690971944 0.0297934043517998 0.0636894270168495 -0.67218626503076 0.0214320990588752 -0.538937067014364 0.210391212199714 -0.800156475872142 -0.784795716944925 1.02339415123139
Rv2428 -0.319835026881228 -0.00542367597812491 -0.8463600245892 -0.00780517879119395 -0.128816600759605 1.59151347128594 0.438659684594281 -1.12293829850293 0.369709250877964 1.48329647261979 0.320624686418703 0.143029384958613 0.984737384340491 -0.827915120164421 -0.305828606718178 0.521091804710109 0.291617972803662 0.562760757580331 2.16484799170787 -1.30067301990510 1.26644620165921 1.25299919221667 0.970454990981787 -0.441839319387459 -0.801573989291505 0.803176420975469 0.602200573257414 -0.583636088348315 -1.67969972374399 0.287296873698395 -0.47669472960159 -0.0956046202720978 0.296590958804563 0.454949731553677 0.350839163890596 -0.513437857947471 -0.0277705327566115 0.17519684089222
Rv2524c -1.77675245168801 0.0956880440563107 -1.04559984367764 -1.57943925589974 -0.758389606207225 1.92119842563877 -0.255922724453848 -0.57150491616246 -0.286890441628501 -0.187734532129668 0.246123207416365 0.42767953018659 0.637083934941187 -0.977442979711855 0.446291761797718 0.381434293738273 0.466090168015125 0.861611218795734 -1.57928987522293 -0.954916252339476 0.164381814123441 0.431857154763949 0.651769705406435 -1.07230111388180 -0.369812251959119 -0.228505406814161 -2.68519381804457 -1.41815762767594 -1.45441732256535 -0.168867563102024 0.389149030884685 -0.395039742075739 0.171149419573345 -0.547944550092176 0.239799687103939 -0.449654510788035 -0.755172817879311 0.253044922307870
Rv3140 -1.14747481540921 0.216388659512508 0.303861443074357 -0.797604150365872 0.616322293278883 -0.755961364968568 -0.0528140496298607 -0.165974608788523 0.238092889185871 1.97840464923008 0.827190550618622 0.173357018678695 0 -0.794459848994841 -0.0627832095223383 -1.07779988920338 1.13561798314695 -0.174243209100915 -0.970876084895317 0.0755067822112686 -0.122009984963148 1.29491511503670 -0.0763915941270304 0.0905369339444461 -0.305280533433135 -0.166694343657699 -1.78761673017728 -0.925106775747058 0.757802083084932 0.149978767171637 -1.08768788728253 0.208042578993092 0.324975368975775 -0.528723882387406 0.235844832591287 0.385491795294514 -0.32880986852939 0
Rv3801c -1.15151317446395 0.31661757832456 -1.33981158336574 -1.20432383596709 0.0933452554969647 2.14036524797437 -0.125946211772436 -0.258463666414108 0.396889845328119 0.467846849371108 0.415362945494554 0.730968956655712 0.442919343287526 -0.625508826724343 1.32129384872834 0.178984758308085 0.195190829607720 0.557002195747558 0.482659113528631 -1.71865821991176 1.04551783236940 0.589678121310315 0.391554046185048 -0.643928859882184 -1.63959054616849 -0.592152446426301 -2.15230964122845 -2.35077377568631 -0.760431488919188 -0.344757147536825 1.69648596789648 -0.282603847469494 0.334084429444575 -0.487201564035848 0.217397863596 -0.530670134692102 -0.0927939619945116 -0.0812553618460166
Rv3838c -2.06126602827831 0.624616923831804 0.280395679688868 0.00476718632529095 0.212021813266080 1.44841681763229 0 0.373941726333003 0.549004434227414 0.932872181228837 -0.577288119175457 1.30206281192597 0.0643620490688837 0.289511596277149 0.276593463160305 0.0403854663364664 0.215240714582425 0.442895878457613 0.980681945195014 0.311972423320714 0.890972107537077 -0.32914505197622 -0.130669655577416 0.00194640371432446 -1.75469466885795 -0.202453724726545 -0.383946112801077 -1.59255308790449 -0.364384124462188 0.622399513397766 0.550970950984891 -0.486922311585198 0.406573979681260 0.567728396519913 0.953128549409527 -0.364946163003575 0.59883423290272 0.145615928012820
[+] Show/hide bicluster #9 motif PSSM #1. bicluster 9 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.055556 0.055556 0.666667 0.222222
2 0 0 0.611111 0.388889
3 0 0 0 1
4 0 0.833333 0 0.166667
5 0.111111 0.222222 0.666667 0
6 0.444444 0.333333 0.111111 0.111111
7 0 0.166667 0.277778 0.555556
8 0.166667 0 0.833333 0
9 0.944444 0.055556 0 0
10 0 0.222222 0 0.777778
11 0 0.111111 0.888889 0 [+] Show/hide bicluster #9 motif PSSM #2. bicluster 9 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.222222 0 0.777778 0
2 0.444444 0.222222 0 0.333333
3 0.666667 0.111111 0 0.222222
4 0.777778 0.222222 0 0
5 0.222222 0 0.333333 0.444444
6 0.222222 0 0 0.777778
7 0 0.555556 0.222222 0.222222
8 0.555556 0.333333 0 0.111111
9 0.111111 0 0.333333 0.555556
10 0 0.777778 0.222222 0
11 0.222222 0.111111 0.222222 0.444444
12 0 0.333333 0 0.666667
13 0.555556 0 0.444444 0
14 0 0 0.777778 0.222222
15 0 0.111111 0.222222 0.666667
16 0.333333 0.222222 0.111111 0.333333
17 0 0.333333 0.222222 0.444444
18 0.111111 0 0.444444 0.444444
19 0.333333 0.555556 0.111111 0
20 0 0.111111 0.111111 0.777778
21 0.111111 0.777778 0 0.111111
22 0 0.111111 0 0.888889
23 0.111111 0.333333 0.111111 0.444444
24 1 0 0 0 |