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[+] Show/hide bicluster #6 rows and columns.
bicluster 6
Mycobacterium tuberculosis H37Rv
21x37
[+] Show/hide bicluster #6 rows (genes).
bicluster 6 genes
Mycobacterium tuberculosis H37Rv
21
[+] Show/hide bicluster #6 rows (short gene names).
bicluster 6 short names
Mycobacterium tuberculosis H37Rv
21
short_name
[+] Show/hide bicluster #6 rows (long gene names).
bicluster 6 long names
Mycobacterium tuberculosis H37Rv
21
long_name
[+] Show/hide bicluster #6 rows (NCBI RefSeq gene IDs).
bicluster 6 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #6 gene upstream sequences.
bicluster 6 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #6 columns (arrays; conditions).
bicluster 6 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #6 ratios.
bicluster 6 ratios
Mycobacterium tuberculosis H37Rv
21x37
GENES Amikacin Ascididemin_Natural_product BZA Cap CCCP Cerulenin Clofazimine Clotrimazole DCCD DIPED DNP Eta GSNO_KCN GSNO_menadione INH KCN Levo NaN3 Nigericin Novobiocin NRP_1 Oflox PA_1 PA_21 PA824 Procept_6778 Rif Rox SM Tet TLM TRC Valinomycin Verapamil X_111895 X_121940 ZnSO4
ORF00401 2.97015262502362 -0.507049830388929 -0.334410182741598 3.22139914277637 0.0357431729005912 1.02285435076220 -0.878688971143536 -0.323762938861382 -0.450648783267412 -0.415962512234161 -0.835672046879503 0.349958623485574 -0.0724882360309252 1.01670747535236 1.04398761975310 -0.444064893299877 -0.331033592929190 -0.158483582455159 1.15716033099495 -1.37329086831550 1.06584804374627 0.339675112335912 -0.653494226804258 -0.62578793286303 -0.403882465436847 0.130015690292374 -1.42427530795221 3.91329509623809 0.433567787517703 3.25972441738449 -0.224352186164510 -0.408655191728483 1.07548231359983 -0.163855135904672 0.0697599134240003 1.78285260815899 0.812037138149992
ORFD0316 3.22747734074146 -0.0404209482628252 -0.164964967031278 3.87374868155033 -0.106463093839922 0.0129398837197422 -0.506141630343171 -0.34567169951399 -0.00412835005441996 -0.242011302722224 -1.17646639857677 0.263747247580155 -0.581741309556833 0.270083699368159 0.556848209304177 -0.76581440588784 0.863249447002765 0.0414021806551765 0.627358097440429 0.0467567160800958 0.812035818062284 1.49024326630059 -0.318449680859546 -0.226613378990553 0.0183410896882125 -0.189570938705035 -0.611057931666212 4.01497599380743 2.75143681580522 3.59513445638468 0.0434529846869515 -0.174315596115692 2.31147754309365 -0.378081414353872 -0.267454180207177 0.454567496287829 0.371872075072787
Rv0610c 1.94958253000828 -0.179499385103119 0.800674131704906 3.48030330135293 -2.41849551331839 -0.566830807179357 -0.840824195450176 -0.506462576577083 -0.685948454285179 -0.0363951584388181 -1.36946596132497 0.553431387310865 -1.15826336901308 0.232726370180909 0.255742494102003 -1.77392988929703 -0.028039871469871 0.142069779786747 -0.0547616886032059 -0.819903374534112 0.629731723935083 0.198149315046061 -0.317271050422778 -0.526973605506296 -0.640445189494313 0.0253185963201890 0 4.60786308156034 1.28419896505453 2.84243812348127 -0.142278838139311 -0.391218070278867 1.17925188791493 0.667533132054412 -0.0440713222412353 0.90992274770517 0.142069779786747
Rv1080c 2.12355245851993 0.39667511421044 -0.532880307656276 3.28940073625802 -0.576019606212611 0.811092363635408 -0.537196389924967 -0.787824298419768 -1.14509807623278 0.377672163563560 -1.37317794224239 0.497718271326782 -0.948105623560121 -0.426393416136094 0.365413724579700 -0.992425783688872 0.350944998388732 -0.977657055218855 0.142101616390594 -0.34201626214243 0.430453540115259 0.365704512865203 -0.329575658805885 -0.424863140208008 -1.59635494098696 0.295050892951019 -0.481038592311798 4.29025535092478 0.661523080028811 2.81373933823510 0.211111913381756 -0.898580053323553 3.29958112572532 0.282455879437176 0.221888336360409 0.612242592742939 0.199869075266483
Rv1169c 3.44164178620056 1.02004959054525 0.067836169736904 1.87257134204635 -0.774046011964873 0.772087018445246 -0.517146082459173 -0.966626899957608 0.657782995648964 -0.0184148702403127 -0.945612289751485 -0.515365425770654 -0.417266280259474 -0.255123080351083 -0.375168936828108 -0.77730763365536 0.109870963919628 0.248173935714094 1.23073988081591 -0.512989313446648 2.10272206696101 0.476815820276907 -0.41187575655624 -0.449345813565257 -0.0169967761131437 0.394551113438831 -0.556726141341799 2.79629311769329 1.97455810095887 2.78987625243458 -0.329287243650228 0.793841899442206 2.32732997872841 -0.171905913925819 0.478565945221725 -0.181612304380729 0.248173935714094
Rv1439c 1.8062625446932 0.915778799726832 -0.800241381174284 1.58928058967741 -0.502827646710484 0.08660855467666 -0.514442368802910 0 -2.13288828562736 -0.382361140545202 -0.617072206114126 -0.0545462882060614 -2.10733576067892 0.305290925233823 -0.220576479420268 -2.26843060550713 0.221905897488325 -0.286120185035356 0.406059640759042 -0.00796265627862107 2.04287444755631 0.277495925237842 0.601365671935268 0.286062209497884 -1.30439913100926 -0.117374129235303 0.813469446692262 3.11687898251138 0.613615882129534 3.11241892983189 0.260262599017541 0.549639695549341 1.63603110112947 0.136061325071926 0.630740767358686 1.02946442747272 -0.0511743038836799
Rv1644 2.25284880390593 -0.493434194442007 0.329582073849617 2.58545129592584 -1.56844671701893 0.325964931367826 -0.672681158031078 -0.139524533579085 -0.310591071311739 -0.711116645637915 -2.45988592119379 -0.139299585756210 -1.11020140943522 -0.976498929121396 0.392139074119672 -1.18477255684347 0.208373403630545 0.195606798378153 0 0.657717646460531 0.520311441806015 -0.279250946274531 -0.37280856238857 -0.627988265441608 -0.625833661345683 0.367371627516114 -1.01427916004628 2.98883204677756 0.640312698476924 3.30214885974704 -0.382837111160737 -0.81387833253798 2.46245142343327 -0.00840992782728305 -0.382313493621936 1.01794505843511 0.326408828179235
Rv1660 1.99726203896361 -0.115099118820980 -0.352273484050593 3.44890936003403 -1.03536776554890 0.242334778258784 0.670690287905744 -0.0783664411472099 -0.524505687425997 -0.117922141070782 -1.01493015798623 -0.510860777561892 -0.767401510925402 0.463034209542605 -0.282939900644893 -0.931465299058325 -0.137691436918182 -0.312075013310333 1.42921979553590 -0.867430153755672 2.15112698659557 0.0164309445119221 -1.06857056716503 -0.62979073197505 -0.783599883552176 -0.64573483167481 -0.104334033043419 2.53832687773337 0.345333257687982 2.77733881975341 -0.56082028441518 -0.728164874610669 2.26482179209092 0.283102994087544 0.0113279615191695 0.595074253983628 2.14868052312948
Rv1665 2.6124960291133 -0.308342346454794 0.250564457916666 2.43254265320497 -1.73737671052494 1.22669920565517 -0.00700129979318266 -0.523958653092404 0.593621274133885 0.519215166022112 -1.63486142507484 0.271557333987762 0 0.248605522124710 1.58049025163885 0.110911742089698 0.15803275448562 -0.54126970356827 0.849156120530773 -0.0614220685375906 -0.306437236775878 -0.0870865215246948 -0.298330968928495 -0.48292352352688 -0.205476741591979 -0.291198980775427 0.544350964532663 4.26672389694068 1.56181136422458 4.08389363588071 0.742418936119077 -0.104954999104123 2.47463160136614 -0.0500978252305367 -0.227077620575866 0.75486175277423 0.318211280881700
Rv1806 2.87586337543627 0.399300626548385 1.10690310429290 3.29864247967328 -0.496472884585463 0.0875490228834048 -0.496541730482611 0.565114255110839 0.127570585529544 0.268639854544831 0.379595711106526 0.0679644432084685 -0.344374397344372 0.926693380126861 -0.301934191768555 -0.771673508203099 4.66806881739611e-05 -0.614179678104258 -0.631493515290599 -0.437479508531986 -0.826051781621477 0.0780766214818821 -0.148454665463516 -0.107470706391726 -0.92295787970365 -0.124557942280351 -0.00916926241319325 3.83194511267008 1.08686017001774 1.59606631410499 -0.246240527512176 -0.118369473152360 2.96714299661274 -0.143710036020152 0.564732776195921 1.53232403297532 0.963808348979423
Rv1943c 1.66959054271331 -0.090658226789787 -0.880835457080819 2.20015700068104 0.161334754067208 0.669956048472163 -0.67432453137346 -0.475706256462493 0.141191814125271 0.225476765562511 -1.02040031132099 0.520828791658207 -0.406417751384986 1.65463540636018 1.00914555505152 -0.405562412482834 0.144458654697086 0.199900045102141 0.798271120934236 -1.79464703016690 2.74719374092096 0.819028568636401 -0.129406960097930 -0.0521672392738097 0.059462532636373 -0.393843446611179 -0.474689741510597 2.58063573297236 2.19080074116777 2.78523886593618 0.129203984295035 -0.7238124213006 1.49875888909867 0.0425837166674258 -0.180185201127642 0.0987865663893207 1.34520165170209
Rv2020c 1.9334998990827 0.0882254804836437 0.257716017786137 2.32232260062590 -1.35045770662650 -0.0172611336832124 0.374062387861761 0.342544083003140 -2.22239155010295 -0.360484472814259 -1.31329127949381 -0.509467100438815 0.108876879968470 1.53890664177204 -0.674116587996084 -1.63214328611766 -0.193744156627928 0.45070884975114 0.552572904024619 -0.997110804967627 1.27051033520114 0.0192960140247626 -0.0189786929926199 -0.32946574449076 -1.31048318801429 -0.816320020161306 -1.49740702552138 4.04891870021242 1.78741016536206 2.07955667714278 -0.262560886493453 -0.495372838059937 1.89755625717591 0 -0.0173088143065872 1.33804725059094 0.597350825980276
Rv2021c 2.36819346154133 0.308650887720443 -0.353417246984294 2.0568411298824 -1.05263179505014 0.477450828789842 0.00155868552162363 -0.275970259635606 -1.60577772040678 -0.116082114965260 -1.80983725518452 0.784397004524487 -0.0745054640454255 -0.388237318139991 0.831508361478155 -1.75431571436841 0.234716779784088 -1.19387300867750 0.315428803594901 -1.68359135622217 0.377098261497136 0.386955669861714 -0.105196957705228 -0.0826955274914684 -1.16590522234088 -0.480194680956266 -0.397226478700883 4.03688838926551 1.40780077332073 3.38955400195489 0.225233925367726 -0.0202597405687519 2.01303688432800 0.175779182179703 0.286538631150846 0.523565322894438 1.71358896705925
Rv2022c 2.07169241667431 0.430195624335780 0 2.10624367091562 -0.950643350432086 0.322277091497070 0.837741539991376 -0.175207026551618 -0.635522149423764 -0.348285166850168 -1.78037158323766 0.348198064334312 0.306790622827213 -1.11287685352657 0.616667365281712 -0.128929365569666 -0.248618755352854 -0.437452451119069 -0.00800638390860408 -0.879076353870016 1.43678312071935 -0.267798985787680 -0.512533083450268 -0.768321169346186 -0.319427887089253 -0.452424274418362 0.0770397595020842 3.78567974473761 1.34666095613103 2.82638689241590 -0.120554531143335 -0.210469960240105 3.49618383653300 -0.0907237951704332 0.467038946740928 2.67359000662156 -1.27328150111387
Rv2050 2.74675222410359 0.233582719285932 -0.133234212344684 2.31317950743915 -0.168003166003021 0.690277792339207 0.00307611758407807 -0.584443519121175 0.64371014343906 -0.225487807899079 -0.598540429691044 0.574980599031504 -0.982351675130758 1.54652937009775 0.487657523415344 -0.776509462026369 -0.0589352634484965 -0.522748662661919 1.22176435569846 -0.154330105299850 1.63855121612931 0.141012145526490 -0.864024465805006 -0.372856447592366 -1.39889048730465 -0.632265363724444 -0.590942557400821 3.32552884323392 1.74396586013205 2.24815218732054 0.398547699484897 -0.717359740039581 2.60152334981814 0.424440070273233 0.151382458207792 1.20001574959943 0.596473827023693
Rv2225 2.20668937838521 0.539272564234228 -0.640986475206252 1.81821198350113 -0.729223962095564 1.23523592936450 -0.575746848253869 -0.590324196903492 -1.08481188116275 -0.480862140060269 -0.447194207027458 0.467280488546357 0.0627688965978452 1.41976116709729 1.1279022113561 -2.17297673789364 0.0168820505626411 -0.73873294135903 0.236803326796603 0.702575957372049 -0.0216480090196356 -0.125705714509991 -0.814933307787055 -1.11615448788079 -1.46135703349064 -0.0854681939352422 -1.15897200468477 3.78591202090538 1.23643465039042 3.24855408863382 0.587165883758212 -0.416114262090991 1.44692198801745 0.0577081908076674 -0.206204124313485 1.12592014211048 0.137889318290972
Rv2907c 2.52095784134618 -0.118123979850900 -0.545742893022421 2.82998554005644 -1.59501116974410 0.704640340353467 -0.681858581612383 -0.0649371530698443 -1.49949259568126 0.098824805491276 -1.29359293016991 0.756314184048309 -0.91849033504702 -0.329578583496701 1.08453545472511 -1.22608315772465 0.100105021546592 -0.416162810023898 1.00070819080378 -0.832647861452365 -0.0700370679131995 0.424757400295492 0.377363658521023 -0.214356282307794 -1.31554642762923 0.0178096360442466 0.0369667769474333 3.98368508932649 1.25657004662386 3.77368751799962 0.179008501857851 -0.985177776167716 1.28515105982789 0.116891310129694 -0.107216863146930 0.156562983194558 0.539648937465853
Rv3252c 2.28797306521020 1.25810547323798 -0.525814431062894 2.02856330690919 -0.638598796035302 0.257338124345389 -0.194742712269631 -0.149605509397497 -2.39715583597847 -0.807509280035023 -0.100282453817055 0.197331321295791 -1.01316635095711 -0.0280996288215781 -0.124153312013187 -1.32494508292315 -0.00216887545745915 0.333645572760253 0 0.340189402846703 0.373315209895073 -0.125027417953774 -0.193865881111226 -0.704135365048147 -1.06451342706099 -0.246562088972240 -0.708700489173761 3.73825810661809 1.94890990495628 2.54462348760415 0.393762495301765 1.34635937497893 2.45506205318604 -0.0962786404290617 1.15522364595493 0.632526942522943 1.10945143208661
Rv3488 1.86576912569573 0.535779577318186 0.414217100577655 2.76961789218382 -1.07931593724721 0.663441735626095 0.275000522527308 0.22116638999296 -0.516169507103405 -0.620594807061278 -1.70340595737715 0.212490006370412 -0.891841737596246 0.641837372212864 0.855679321795632 -0.0752135111041203 -0.0437098145787046 0.65756226440294 0.536992237619412 -0.89203309588502 -0.164066760966113 -0.0761356693349917 -0.186859452718336 -0.460478659103439 -0.116927954548512 -0.093647453503224 0 3.67100464986988 0.575608463110711 4.70639227395192 0.450073243327661 -0.582075137428223 3.04805584690846 -0.655269241511772 0.252030315682996 2.31016655420774 0.88430247652115
Rv3603c 2.61830759188328 0.0612191364861026 -0.312922211717987 2.00592768931370 -1.43137792201304 0.548135343750701 -0.809869959954584 -0.131619427113935 -1.76107902546554 -0.211947243954982 -1.67487297851022 0.57940035293736 -1.33670000167431 -0.57241942654186 1.03472101988280 -0.578006063170402 0.208005228711606 -0.237471904697393 0.478741883316234 -0.265065504648202 1.02729891063077 0.703518865389781 -0.862587132202927 -0.615369370041196 -0.780290794463961 -0.0225618052777022 0.00417905689461366 3.44436621337813 1.24936275412601 4.43507153405061 0.196739929569491 -0.408694589862729 2.65732903568605 -0.169905217629619 0.0926554580617289 1.55179034901059 0.118756374808197
Rv3681c 2.43510437366225 0.249018168379721 0.397391209519781 1.91579759304768 0.0588796316618901 -0.0845525214597846 -0.866031483261709 -0.483811036230671 -0.244706436860328 -0.347718553017763 -0.0117044976790994 -0.52616015349819 -1.21996931966623 0.835892784325305 0.1420421422047 -0.163244663122094 -0.239845796448018 -0.859390698866504 0.0643818411372769 1.31128833930562 1.40062127885672 0.783980082026213 0.137062814850942 -0.266002291012515 0.56954399506328 -0.373389285155861 -0.652721598388202 3.08863550264732 0.507640330954192 3.89589351183153 -0.248867647527924 0.201611554344785 3.06408058765683 0.198426625736379 0.32548203745784 1.50121669684153 0.179765611329479
[+] Show/hide bicluster #6 motif PSSM #1. bicluster 6 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0 0.285714 0.714286
2 0.285714 0.142857 0.428571 0.142857
3 0.142857 0.857143 0 0
4 0.714286 0 0.285714 0
5 0.857143 0.142857 0 0
6 1 0 0 0
7 0.571429 0 0 0.428571
8 0.571429 0 0 0.428571
9 0 0.428571 0.571429 0
10 0 0.714286 0 0.285714
11 0 0 0.857143 0.142857
12 0 0.142857 0 0.857143
13 0.428571 0 0 0.571429
14 0.285714 0.142857 0.428571 0.142857
15 0 0 0 1 [+] Show/hide bicluster #6 motif PSSM #2. bicluster 6 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 1 0 0
4 0.727273 0 0.181818 0.090909
5 0.727273 0 0 0.272727
6 0.272727 0.454545 0 0.272727
7 0.909091 0 0.090909 0
8 0 0 1 0 |