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[+] Show/hide bicluster #1 rows and columns.
bicluster 1
Mycobacterium tuberculosis H37Rv
26x37
[+] Show/hide bicluster #1 rows (genes).
bicluster 1 genes
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #1 rows (short gene names).
bicluster 1 short names
Mycobacterium tuberculosis H37Rv
26
short_name
[+] Show/hide bicluster #1 rows (long gene names).
bicluster 1 long names
Mycobacterium tuberculosis H37Rv
26
long_name
[+] Show/hide bicluster #1 rows (NCBI RefSeq gene IDs).
bicluster 1 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
44
[+] Show/hide bicluster #1 gene upstream sequences.
bicluster 1 upstream sequences
Mycobacterium tuberculosis H37Rv
24
upstream
[+] Show/hide bicluster #1 columns (arrays; conditions).
bicluster 1 arrays
Mycobacterium tuberculosis H37Rv
37
[+] Show/hide bicluster #1 ratios.
bicluster 1 ratios
Mycobacterium tuberculosis H37Rv
26x37
GENES Amikacin Antimycin ARP4 BZA Cap Cephalexin Clofazimine DIPED Dipyridyl DTNB EMB GSNO GSNO_CFZ GSNO_KCN H2O2 Levo mercaptoethanol Nam NaN3 Nigericin Novobiocin NRP_1 Palmitate Procept_6778 PZA Rif Rifp Tet Valinomycin X_109 X_111891 X_111895 X_121940 X_124196 X_241 X5CL_PZA ZnSO4
ORF00540 -1.23426126687992 -0.406595256361912 -0.439520077483879 -0.77141905433519 -0.0292238910448178 -0.170781111014868 0 -0.000645098087026645 1.50702017190862 -0.471671084444273 0.761824458502233 0.214829659874128 0.486260585752873 -0.536894131971358 0.703743333013933 0.587595690327018 -0.208804100112247 -0.389838055867641 -0.513080993166372 0.154285172870794 -0.0471879756256468 1.15349389617873 -1.36196109499965 -0.59431160386723 0.145435230230945 0.0374232544477863 0.434613288646237 0.0852989666635341 1.16731822502873 -0.362448280834521 0.365986153944544 0.0325519291478755 -0.503143457624626 0.41229615850012 -0.322360690535646 0.224422520183416 -0.421166172042538
ORFD0388 -0.0117156882314779 0.244025013422617 0.507256771162633 -1.06258608603650 0.505536623614761 -0.491732799318206 0.537078368560891 0.269488806632903 0.429377929758014 0.247162775022002 0.110722033665263 -0.156567198267070 2.15642519862717 -0.885372132993383 0.306487988417241 -0.140173151745522 0.123610759070356 -0.277505143486127 -0.461753325969664 0.298173037568907 -1.68467765537432 -0.879115058100488 0.0421279551178659 -1.17538711806393 -0.73007706703149 0.390109823451018 -0.341942604609630 -0.071404975842675 -1.92764219995917 -0.0220052526087316 -0.26457398736752 1.20434690748770 0.461274526717165 -0.0323305539973676 0.856409362668663 -1.41998384306864 -0.104890651707952
Rv0076c -1.29363470958585 0.232091185849052 -0.0584730957526143 -0.237315444933374 0.109181119602800 -0.183854142414291 0.127721841586173 -0.0759021303255273 0.137213030590061 -0.175217992937268 -0.935654392080702 0.463459028808627 0.141250364606602 0.177210809505237 -0.262700151462046 0.141426053265776 -0.173435500684132 -0.103901370594609 -0.522893720032233 0.0785459391754316 -1.24615742185811 1.49020113350839 0.0472538683005498 -0.582078274043931 -0.498018746005285 -1.51984786208378 -1.15105048662576 -0.759858381152267 1.23496397331279 -0.609114234450221 0.0557614652636964 -0.0532654022760285 0.391069899327661 0.0455345960666281 0.0794503022097376 -0.097667365011613 0
Rv0079 -0.0310185506228637 0.372061796865243 0.837564702619666 0.217743775454805 -0.098886209531568 -0.169670497574143 0.076240467795952 -0.43238244997651 0.398279100977185 0.171401095871410 -0.435827078212186 2.15555332953084 0.868662407716603 -0.703188043966369 -0.869327362466573 0.344751785990616 0.343525179767968 0 0.100762932041604 -0.552099770919466 -0.449069811521581 4.99421346220709 2.02936279845966 -0.00580605213296387 -0.213491900782709 -0.221872135761378 0.839998089287402 -0.508947406525313 -0.516714697977839 -0.170105442433837 -0.27396844007265 0.257874530135853 -0.315427222291131 -0.145974358931584 0.253002910118081 0.484539161168162 -0.356425517096823
Rv0164 0.389414728729009 0.0234628466337151 0 -1.22711445016200 1.15118506767361 0.201158219598473 0 0.700792292672349 -0.403885985890508 0.167073985993135 0.714031424550699 0.543214559224614 0 1.98993750639424 -0.495414441417906 0.774581454589985 0.0545039297915902 -0.839312388904866 0 1.60393420047035 0 1.24930482723502 0 -0.556984218194293 -0.98235777372546 -0.714794969653433 -1.00293713190694 0.505512037137634 0.505796001667426 0.153500868214826 0.266102676221415 -0.9677001910789 -0.264307402867253 -0.0400872077941959 -0.416099850769493 -0.979764260098125 0
Rv0201c 0.0380249167101834 -0.0530784447101255 0.387373400440348 -0.911824317614906 0.628322568199066 0.357488962410251 2.95843513498907 -1.46793682754922 -0.278554832629035 0.331388227484013 -0.778943253182622 0.0762153958625775 0.73342721650567 0.636727156105567 -1.81028856064526 -0.591726331204822 0.347020565827269 -0.735892105007826 0.66475920629213 -1.1668677093315 -0.213102157293202 0.214805848051045 -0.500055312001231 0.500885947874436 -0.314674493401965 -0.365502511416971 0.285817716555244 1.02097663337716 1.29607297857371 -0.308712578031172 0.211915610437568 0.770852129386613 0.0619567266687288 0.459789708628371 -0.703374523315583 0.224811494188171 1.07820233291698
Rv0569 0.197930163081003 -0.179049636988297 0.194331618382919 -1.01438298853663 0.056592291574969 -0.203833408031696 -0.205637212843858 0.220895464739415 -0.301603986721119 -0.196085681610090 0.119043123948715 0.984820226815192 0.411357680309099 -0.372631534452081 -0.500337590733505 -0.198397644639077 -0.327556325706253 -0.924822367774881 0.0834787156009641 -0.162214542809064 0.543862848379077 4.70269840555031 1.74775453427891 0.075677532896357 -0.84532029363699 0.224098085393124 0.0237282376617158 0.213851596925190 -0.0321157027506767 0.470441381199855 -0.213401777049069 -0.0700527267433786 0.0541006624848093 0.0260943714959680 0.183762998949677 -1.13693067450601 -0.451019917798116
Rv1194c 0.365417460893962 0.321211052444754 -0.19340505802684 -0.411934226204059 1.07461730664447 -0.537531443118942 0.579424965639274 -0.363330669675162 0.32623794158589 0.0148806256639019 0.117732818956893 -0.290944291383571 -0.267137192865454 -0.432205434978031 0.761078464919009 0.168997430122314 -0.524101826878163 -0.0904731990922501 -0.324959517558253 1.50511031720661 0.076403905121582 3.08127128262799 -0.264361807022079 -0.310092617987948 -0.107345698654154 -0.275142784240854 0.182919644483895 1.00005158180824 0 0.217313991733392 -0.0824251868304003 0.342745032591892 1.31239205672507 -0.0337028309353142 -0.211323498451330 -0.528220558195902 0.226123947856687
Rv1520 0.548473401980573 0.513550643215469 0.990077375604397 -0.373620872844402 0.591037170983483 -0.374374550724128 2.10676568497295 0.0791846113577724 1.88522232361638 -0.0328453211562699 0.108614798286993 0.355394027262102 0.675291014190769 -0.55951423855896 0.680077540206851 -0.128094670114156 -0.0417029644308548 0.123095900875925 -0.997833451013179 -0.675055747954894 -1.19291833825281 2.84051975584877 -0.265305487787612 -0.537654693111367 -0.422618402182783 0.121920571213684 -0.316650619625338 1.50623074206798 1.32900365263255 -0.272681935928277 0.24491887347252 1.07514155072183 1.11049148446419 0.253527531033316 -0.181210468803086 -0.734668078224108 2.08504714078244
Rv1592c -0.437276074272867 -0.173552911171029 -0.0220524411029222 -0.948693078740873 -0.099656512436249 0 0.00325097335778985 0.844500163546214 1.23403410956114 0.0765047361880444 0.934356559485544 0.725587687029077 1.09019143481612 0.0024126413687704 0.890095549061171 0.835366886767481 0.417485415506855 -0.268094113849116 -0.0934454482383786 -0.163103181965702 -0.243065299320093 1.37016759049289 -0.916090333493409 -0.785720139452868 0.147859969750111 0.178443281477796 -0.0881388831010005 -1.05094367447299 0.75251174841904 -0.511217910033896 0.413188630728821 -0.0330163488224219 -0.419861032987842 0.248712970282506 -0.669679279617774 -0.400316491728765 0.311585594512103
Rv1733c 0.675339252498139 0.528392697390342 0.487993268749563 -0.354618938243154 -0.153563424233556 -0.262009805146849 -0.589260295366701 0.256561429071568 0.493732970809098 -0.623007821601458 -0.518449025183142 0.389854223481267 -0.571525871428484 -0.043498451993983 -0.119270886023323 0.06215608435626 -0.37947101253337 -0.213849828591524 -0.26687455467182 -0.891643682775285 0.249963700497544 4.5485922625924 0.945525564117424 0.253592459550042 -0.414872824446422 0.968493133024021 -0.0466003803054717 0.489058275303101 -0.566853545447878 -0.0803977851671317 -0.229134764463086 0.430000152827819 0.288425083987974 0 -0.236472195927383 -0.257037815223712 0.123451331175342
Rv1996 0.380211737265334 -0.454997932021084 0.339649955813204 0.256165716310071 -0.390917309391286 -0.598406873781992 -0.374566793822181 0.679096276727633 -0.129019430911938 -0.716627651668874 0.273187234967984 2.14756781699504 -0.647328078319996 -0.581692661084222 0.254521708149001 -0.341785220074419 -0.863405054510334 0.267930036683661 0.137868324314610 -0.757945862480922 -0.733874379178548 5.25388248939629 0.847856004289386 -0.0523354010200715 -0.027824127982563 1.69557949144544 0.304211557872481 -0.785825685554565 -0.997050450435458 0.228215233592246 -0.224201357496596 0.146048269502461 -0.0890335301188625 0.582070425426537 0.315839511559841 0.1277590626095 -0.355911961688272
Rv2007c 0.70567016913781 -0.0981221710647485 0.22438706158912 -1.01033577605029 0.81701179373027 0.0344999411250418 -0.456647694060453 0.133495375747968 -0.228909768219065 0.162647171636015 -0.353019857061351 3.09886024415356 0.0383394868867749 -1.22715949269115 -0.574265649578306 0.131245141309404 -0.0560120040056407 -0.759286072997735 -0.198301402334194 -0.606830975964839 -0.472060741857117 4.78913445070161 1.54206542669879 -0.0981858004031184 -0.675638965478676 0.20443508536033 0.437170225234879 0.564047287959915 1.28916373231354 -0.130094366572585 -0.134612204861702 -0.59693410485825 -0.297287036144329 -0.0126566544263094 0.0237803496715005 0.367726743413994 -0.0928159844675646
Rv2029c 0.126996750695329 -0.0324128206073564 0.0927338165487939 -0.266104910649683 -0.083476140181312 -0.104419781853757 1.24943038261196 -0.46797448210787 -0.0567880928781986 0.221447012512765 -0.468357291244682 2.70367211956509 2.18851475064699 -0.396702470294813 -0.0671630998038096 -0.101884401553351 -0.0488188130336091 -0.529513046040516 0.285181275844944 0.117784147551412 -0.379286522102231 3.78601192344059 1.15253380142013 -0.153399171688774 -0.285637730589913 -0.0880396686640388 0.0727203700852234 -0.318615532809306 1.00643986096586 0.396162636971159 -0.0729955164114187 0.118211126840839 0.0134867484500209 0.425623066193701 0.574791287366459 0.379228158703632 0.285181275844944
Rv2030c 0.0121142298097042 -0.172803747814566 0.00771437797291701 -0.0155937413056394 0.213432483335996 -0.150591874860934 -0.476314733995949 0.0875967488977608 -0.139766525987389 -0.30813849594327 -0.204727603464996 3.64017050886475 -1.11091517630702 -0.49832288222209 0.251342782116724 -0.10297367280019 -0.386018500115875 -0.10729949843021 0.2968309017286 -0.208574777912787 -0.133083062142957 5.40226187751264 1.61311755951069 -0.425065592116798 0.0918592274772417 0.524317557494709 0.179894673883924 -0.131689380594937 0.4569241190535 -0.00419281156736923 0 -0.0660332025384698 0.306195288860712 -0.0250459647589326 0.293710188521301 1.86899366376214 0.2968309017286
Rv2031c 0.207079122513396 -0.0135755825985236 0.110011597198931 -1.16691736838871 0.0661538826052917 -0.0250989640552489 -0.917005221490758 0.0570272223097846 -0.152459205056996 -0.120763301776984 -0.272026612251368 2.70944125676854 0.765724437789282 -1.09836950677098 -0.177143109365310 0.088307202658155 -0.319102195161966 -0.803419377984012 0.179897339312125 -1.09896499489689 -0.765770843646766 4.51700893475438 1.69125449991011 -0.34963580315325 -0.364790222322138 0.177111483553083 0.211045588336408 0.97222804271793 0.289510766942968 -0.307702877717153 -0.0950153458092228 -0.237443620322012 -0.122085570927932 0.0666742839106309 -0.00832794341570695 0.85992410593636 0.179897339312125
Rv2032 0.380532145777285 0.101117480048470 -0.352597980739935 -0.152560119329045 -0.0254687530086497 0.173619885285702 -0.980497093041687 -0.00314521448576263 0.093973867869015 0.0743523302373004 -0.0119764479989085 1.97680675943952 -0.111206918213801 -1.30612104837947 0.180094776008825 -0.00735232230930707 -0.381677435443234 -0.138039640785918 -0.438608698617403 -0.91765567659953 0.267121749322676 4.06873930280806 1.95685910084834 -0.0220790143793653 -0.263295461560011 0.329787461704659 0.346861691878438 0.684394829879009 -0.247329338312675 0.107644740689340 -0.0199782777126542 -0.117152011194907 -0.132765197030223 -0.145257699706363 0.0583910357137318 -0.290158573174508 0.210645697143958
Rv2406c 0.515423119006824 -0.145396751983815 -0.0997818097403657 1.05925562377822 0.583624415218574 0.300998928234118 -0.623538621313193 -0.770823202899183 -0.213316949292333 -0.334415754356004 -0.5702066056437 0.082834410482772 0.868951218229411 -1.44219190102786 -0.920289658334806 0.0381314211965087 -0.203611788730972 0.746535090965391 0.191822481118999 -1.37404156330105 -2.10993549691200 0 0.773163271834075 0.179100066144566 0.421209914781495 -1.25084232338693 -1.4089645051334 0.358740545178829 0.110471468074327 -0.88568626295393 -0.415464121884232 0.232683468483785 1.24733244835884 0.216966352293782 -0.700754492997742 0.612541421069405 1.16747722081370
Rv2623 0.346140749498122 -0.100132022502256 0.362300621726437 -0.516664050169562 0.0967180009756823 -0.142943802639862 -0.672196315898189 -0.251520307463279 -0.0698258024803127 -0.175381626432855 -0.0398306211258892 1.51650707583736 0.152794940728271 0.967297749406056 0.231855330978304 -0.096246941267868 -0.487432225322285 -0.59910309131368 0.152794940728271 -0.759986916469425 -0.54418759639122 4.89795399717646 1.01001765723981 0.0430699503091575 -0.435750614364312 -0.32307871312154 0.254003752120189 0.152794940728271 -0.0578018187405751 -0.0825104038434099 -0.538363946834122 -0.0484459694818108 -0.723270755992146 -0.305148513130500 -0.609865962156602 0.792514321098236 0.152794940728271
Rv2626c 0.0320501491624098 0.0469281554796752 0.00454045621269895 -0.466404228058646 0.421531994992237 -0.0523946058838963 -0.69370486330506 -0.196784976611081 -0.0775263910619443 0.128247218150056 -0.127512378385007 2.88896036487648 -0.746691268376111 -1.82274341546915 0.099089384046613 0.00247542284134346 0.555992407585659 -0.379163926326075 0.174771027803774 -0.450894854934928 0.0497809269726089 4.29288116383583 2.4627311752827 -0.422983105402518 -0.543925064908192 0.155664816380841 0.143666237802003 0.718621115550663 0.499511298557557 -0.224740531320431 -0.200731002418701 -0.184891593413702 -0.0333521690760016 -0.282662191375914 0.133255826177573 -0.226348887329696 0.174771027803774
Rv2627c 0.26047259062275 0.164873529285105 -0.201843022442906 -0.801262219557464 0.362072526706121 0.200035821480890 -0.0520176477286557 0.0665664339782137 -0.0275746129223325 -0.60119085638599 -0.572409757621278 0.954071353309742 0.123587270638333 0 0.167090943791895 -0.285876985270648 -0.603090770461803 -0.394213296954744 0.123587270638333 -0.754141462564139 0.291244588962643 5.82973309893924 1.53443407041756 0.312415010889409 -0.355752929584991 -0.0280203791266691 -0.0160631285952684 0.123587270638333 0.193698858269848 -0.253472844315970 -0.129756543366337 0.0460108881248966 -0.80681545788768 -0.222423204626404 -0.526072873590015 -0.210813317575364 0.123587270638333
Rv2628 0.421336063041082 -0.123071646216258 -0.524401859786532 -0.406952125424808 0.188512889066488 -0.140455201202781 -0.813590023585519 -0.238214492666053 -0.0367990391662547 -0.31052386164776 -0.0710470336345107 0.643063342326032 0.116324189304388 0.0554101088719195 0.104323598962151 -0.00299071627553441 0.508638800588987 -0.475592454959273 0.116324189304388 0.0957477818715784 -0.115039103091536 6.06108479402712 1.86157513280080 -0.269182723561822 -0.467494742692096 0.370954721310301 0.00825215851645092 0.574886727108568 0.621906718386063 0.0545385253758265 -0.00515673734140156 -0.00345932140796291 0.317049109952149 0.0371367589662314 -0.421424620569981 -0.650196906444972 0.116324189304388
Rv3134c -0.445422263065508 0 0.233383011670249 -0.788743676539084 0.284478725492226 -0.115182936840280 -0.379949033068275 -0.47674496447905 0.130501534313991 -0.143123302661070 -0.128739325202513 1.74333567293254 0.177523050424825 -0.301723687145206 -0.171164289265046 0.145100558758547 -0.720032208352207 -0.826604897551143 -0.666092319012398 -0.817601883719888 0.366883031757893 5.45872799607639 1.31398517326115 0.179521792985651 -0.354875235431708 0.608742394288131 -0.0729131569913518 -0.267151830853076 -0.521503769421531 0.0698250360616033 -0.0890937292413212 -0.101902199877460 -0.261528051509921 0.0808772740787346 0.390080041749103 -0.205608760094874 -0.485680874808799
Rv3289c -0.383699325782390 0.411936484008811 0.834116372322447 -0.770248570615264 -0.0319692528455011 -0.12286205676034 0.538511325044231 -0.814491731600144 0.0579680764509296 0.0565861136073216 -0.214181140740005 -0.053711517144537 -0.0385865936433733 0.769738245799558 -0.130281763283088 0.0549795688494261 -0.316869842563640 -0.630416717001788 -0.0384278632633046 -0.117714981593044 0.456220188852255 1.00517602772057 0.55928280915516 1.03281493072010 -0.362305681538541 -0.392828137679154 -0.427173774792589 -0.183930331574173 0.601015699432638 0 -0.306941944624334 -0.071793424671501 0.155514391341463 -0.370810485300844 0.361835169707197 -0.782589556122173 -0.679763220972344
Rv3749c 0.259664417764699 0.042918934443563 -0.423349927457192 -1.19174665904987 0.273676009753709 -0.481558786026304 0.410932773413744 -0.529328790154323 0.402990905113403 0 -0.513345652845485 0.179279895621063 1.41523531712070 -0.534508118948987 -1.10737793169887 -0.235394572793679 -0.109134848648055 -1.35967186506198 0.658395460428029 -0.0967877704388543 -0.547562035211921 0.83743492954561 1.56855158298479 -1.18341904861821 -1.5235401027658 0.0696570075171712 -0.100499822256453 1.33234288469947 0.180058484306668 -0.875119227696336 -0.261621801985019 0.588648802267236 -0.632757936295131 0.058091404815797 -0.303760310117806 -1.99053342482337 -0.073394722425276
Rv3782 -1.08566444990687 -0.670828923274928 -1.63704627817589 -0.654602894244814 0.387372299265865 0.340181929766511 0.182427281178611 -0.129487569740507 -0.0448656733762833 0.492357371209861 4.94996865610011e-05 1.30663952455322 0.293944246347000 -0.00359348588047955 -0.716165036341607 -0.369339604593726 0.593633722799821 -0.215507095665244 -0.410145597024823 -0.410361828691136 -0.416498996625098 0.800563169793044 0.646806347994584 0.075640805505664 -0.135480742897744 -1.95399757073585 -1.14577038897994 0.670259204398097 -0.0356619151451994 -0.0762440699675836 0.376596622163750 -0.146690836097431 -0.18354422478742 0 -0.628683743139416 0.13861433899827 1.30052636958129
[+] Show/hide bicluster #1 motif PSSM #1. bicluster 1 motif PSSM #1 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 0.666667 0.166667 0.166667 0
2 0.083333 0.083333 0.75 0.083333
3 0.083333 0 0.833333 0.083333
4 0 0 1 0
5 0.166667 0.25 0.333333 0.25
6 0 1 0 0
7 0.25 0 0.583333 0.166667
8 0.666667 0 0 0.333333
9 0.5 0 0 0.5
10 0.416667 0 0.583333 0
11 0 0 1 0
12 0.166667 0 0 0.833333
13 0 1 0 0
14 0 1 0 0
15 0 0.833333 0 0.166667
16 0.083333 0.5 0.083333 0.333333
17 0.583333 0 0 0.416667
18 0.583333 0.25 0.166667 0 [+] Show/hide bicluster #1 motif PSSM #2. bicluster 1 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 1 0 0
2 0 1 0 0
3 1 0 0 0
4 0.25 0 0.25 0.5
5 0 1 0 0
6 0.5 0 0.5 0
7 0 0.25 0 0.75
8 0 0.25 0.75 0
9 0 0 1 0
10 0 1 0 0
11 0 1 0 0
12 1 0 0 0
13 0 0.5 0.5 0
14 0 0 1 0
15 0 0 1 0
16 0 1 0 0
17 0.25 0.25 0 0.5
18 0.75 0.25 0 0
19 0 0.5 0.5 0
20 0 0.25 0.75 0
21 0 0 1 0
22 1 0 0 0
23 0 1 0 0
24 1 0 0 0 |