[+] Show/hide bicluster #10 rows and columns.
bicluster 10
Helicobacter pylori 26695
21x34
[+] Show/hide bicluster #10 rows (genes).
bicluster 10 genes
Helicobacter pylori 26695
21
[+] Show/hide bicluster #10 rows (short gene names).
bicluster 10 short names
Helicobacter pylori 26695
21
short_name
[+] Show/hide bicluster #10 rows (long gene names).
bicluster 10 long names
Helicobacter pylori 26695
21
long_name
[+] Show/hide bicluster #10 rows (NCBI RefSeq gene IDs).
bicluster 10 NCBI RefSeq IDs
Helicobacter pylori 26695
42
[+] Show/hide bicluster #10 gene upstream sequences.
bicluster 10 upstream sequences
Helicobacter pylori 26695
21
upstream
[+] Show/hide bicluster #10 columns (arrays; conditions).
bicluster 10 arrays
Helicobacter pylori 26695
34
[+] Show/hide bicluster #10 ratios.
bicluster 10 ratios
Helicobacter pylori 26695
21x34
GENES TC1-42HR TC2-12HR TC2-18HR Log-iron-survival-2hrs TC1-12HR TC2-22HR Stat-Chelate-T Stat-iron-survival-30 TC1-60HR Log-Chelate-T-4 Log-iron-survival-60 TC1-24HR Stat-Chelate-T-4 TC1-18HR TC2-50HR Log-Chelate-T-5 TC1-36HR FeAddBack-2-120-repeat TC2-6HR Stat-Chelate-T-5 TC1-30HR G27pH5-T1-2 TC2-42HR G27pH5-T1 TC-Motility_broth-T TC1-6HR Log-Chelate-T-3 FeAddBack-2-0-repeat G27pH5-T1-3 Stat-iron-survival-2hrs Log-Chelate-T-2 G27pH-5-T2 Log-iron-survival-30 TC-Motility_broth-T-2
HP0177 -0.295012798245542 0.353249712351758 0.335974834790260 0.83967389632028 0.781484835060494 0.717840549307603 0.201412630627005 0.115947446901695 -2.73986257523873 -0.632327512735862 -0.184089900219075 0.385981059310388 1.19699110061865 0.110492222408590 -2.47983020773406 1.47520754976700 0.97332689640135 -0.53777028818871 0.168681283668376 0.647831834979424 0.775120406485205 -1.63427041130280 -0.675060104598517 -0.0577105327954783 0.842401508566832 -0.086805063425371 -1.24604026821016 -0.108625961397791 -0.58141208413355 1.97345138680392 -0.91872679862387 -0.595959349448496 -0.34501902276567 1.92344516228379
HP1238 -0.749711522016607 -0.909647954894137 -0.655390035960628 0.91390077552146 -0.469936679319162 -0.888687624659475 -0.413890578909087 1.04376369110578 -0.587952451727368 0.392626475772474 0.674679615234556 -0.383817061615877 1.79104502990677 -0.48451777861284 -0.788898226368367 -0.192440133386354 -0.693665421606533 -1.00305812224426 -0.757002071663446 -0.48269514120113 -0.676806025548218 0.50881961076897 -0.851779217072353 0.66511076882308 0.210362734601499 -0.227981562914694 0.581725107237359 -0.392018929968570 2.28999202136232 1.34267622662618 0.407207575066152 0.162974161897046 0.667389065587717 -0.236183431267387
HP1341 0.483124781275757 0.885236064573222 -0.0216206200442981 1.54852820045056 1.19390434489489 0.321514341702872 0.0649290466463943 0.882172359557622 -1.08013070293400 -1.21416779736649 0.322280267956772 1.04225094662271 -0.358628171760268 1.05833539795461 -1.81618583293184 0.810175291691028 1.46427631252157 -1.79244211906094 0.994763518880912 -0.45130524848216 1.54163486416546 0.525250725240254 -1.10693812182050 1.11960949826660 0.655458188403242 0.542867029079952 -1.91269254092323 -0.216931814788781 0.398106967092865 -0.0691080477860939 -1.70053096859295 -0.0185569150286984 0.139989819528588 1.07978133306380
HP1561 -0.209747375790801 -0.0411273709225849 0.481152569249756 1.28130817287534 -0.240692620129912 0.786184263449563 0.250010540104560 2.09283141727855 -0.0152344113735329 -0.103649395199564 0.79186808383838 -0.311424607190737 1.89579231046625 -0.351842885511209 0.284113462437458 1.05269228612517 0.178015481846221 -1.31682928041246 -0.374578167066474 -0.206589697797015 0.290428818425032 -1.11852710240265 0.090232033618947 -0.57919570106386 0.231696007740597 -0.689714430846399 0.195066943012670 0.447681182515616 -2.20918908145662 1.52571244959444 0.394632192219997 -0.445941689726056 1.13352884276611 0.994591011039494
HP1562 -0.478461540450565 0.050537448012768 0.420063175612014 0.991310677214713 -0.233301154346073 0.938351273420296 0.298078032040604 1.62622847326688 -0.205928878227610 0.0124542812392547 0.737224548897679 -0.306492240488919 1.68751856979300 -0.401105107941866 0.821126525695575 1.02582354710321 0.0755295262078861 -0.631389257025454 -0.534396191649162 0.0487522995702596 0.233812688110301 -2.23326245943636 0.566445347897705 -0.609372426234516 0.152885958716585 -0.922368453154328 0.232622589148628 0.334971099852445 -2.34037136598686 1.29954630828784 0.423633472497031 -0.239251649154434 0.965128500057922 0.887177018068387
HP0175 -0.539628159960331 0.591377423637236 0.427369435204566 1.93916584343046 0.27635217852894 0.394892605811959 -0.110934011977908 1.17514843196936 -2.50853594188718 0.79679336954548 0.971356327530747 0.282847544407462 1.26689547500348 0.346989282457862 -1.25168264439326 1.29774846292646 0.35916809348009 -0.484417549992897 -0.0849525484638214 0.167554800063704 0.404635654629741 -1.88173313460985 -0.680090447083359 -0.883070630787158 0.655519161687636 -1.40107605959925 0.368911142297872 0.0311521166147514 -1.21920581500065 1.80195123924669 -0.079269103320115 -0.974817673821275 0.60761583833354 1.36107828024204
HP0176 -0.589914027706156 0.374913098654916 0.166688463476497 1.87381257173316 0.266827028485966 -0.130548229488117 0.0601918943394426 1.17125311563498 -2.70315564961233 0.719040072060471 0.623670010146692 0.278748286225188 1.54637535916251 -0.155980245998458 -1.81859832536202 1.12754183725783 0.72380857515616 -0.992852539291876 -0.128958728456221 0.475051663664385 0.301796051187685 -1.12478112493927 -0.79178065875699 -0.388842147171271 0.799309874171236 -0.972983776393172 0.118208682003659 -0.802907165980264 -0.984110283616446 2.05739994091718 -0.0574311820208858 -0.788601656693197 0.145230199545896 1.64254017159224
HP0294 -1.44307035688435 0.479260178599351 0.581354919655371 1.35500617965766 0.219485781912365 0.70772552136249 -0.476346597685003 1.20549410331118 -1.32055666761712 0.578859270429557 1.10680252029036 0.472907616933643 1.39380218125895 0.461790634018654 -1.11591343110039 1.30373193192730 0.356973366534472 -1.99347444977747 0.0681586879471072 -0.406014664957522 0.441598563009796 -0.084075914827537 -1.25453540173423 0.271894415654455 1.04622630726379 -0.357236066452979 0.490604038716686 -0.526713336605973 0.908284968236984 0.995405813938122 0.332470628681027 -0.539191582735043 1.10839066070678 1.33095719620891
HP0614 -0.257515927349497 1.23115639042297 1.05330615776874 1.23115639042297 0.347668892098934 0.965204422148354 -0.704611651105277 0.839227174018272 -0.679086849196568 0.793941235147982 1.41641704943780 0.251333349411225 0.491760515777132 0.636675520162063 0.136883431175399 0.691018646806412 0.159938090963911 -2.14882141071419 0.572451825036923 -0.0524941313730899 0.651496372883249 -1.07101606560127 0.146763999656190 0.439064150546248 0.697605692460272 -0.298684962686125 0.493407277190597 -1.03972759874543 -1.07348620772146 0.202753887714004 0.557630972315737 0.116298913507085 1.37277787198097 0.80629194574897
HP0649 -1.08834718779730 -0.402237679873137 0.124065763645202 1.19516260854702 0.227741598817573 0.100292960675742 -0.375163098713474 1.83570757744638 -1.10749750130047 0.873569412821257 1.00365947351525 0.31556889867697 1.88259282774726 0.372359483548459 -1.84115261516356 0.625275692918 0.398773709070083 -0.843355246084243 -0.353371362658135 -0.898164764041611 0.172932080860205 -0.132812579552582 -1.69191224096638 0.678104143961247 0.467450695426303 -0.154604315607921 0.686688767255774 -0.183659963681706 0.323493166333457 1.52534042756731 0.666217742476516 -0.303184334167051 1.10733530868762 0.702537302568748
HP0686 -0.596507084324541 0.304243578687139 0.382013308061918 0.380372596471733 0.336073383536733 0.595633957104033 -0.352697342023019 1.10491083469752 -0.485594980828020 0.724922030410627 1.07767502230045 0.623197911819144 1.59745245407112 0.375778604019215 -0.99487185842151 1.17611771771156 1.18300870639034 -1.66231333330885 0.175939932334656 -0.149249104840052 0.675044398068997 -0.229972115077165 -1.33088959209144 0.484393711289476 1.45142912254464 -0.274271328012165 0.596290241740107 -0.425544936627242 -0.159968420562596 0.785956501565517 0.67143483257059 -0.300850855773166 1.09178514197604 1.43239686809849
HP0804 -0.746676410429935 0.0652015959286088 0.032726475674267 1.05187216130317 0.0403676804399945 -0.0217171082815412 -0.306351985804890 1.27346709950927 -0.0264928612601209 0.343150419281946 0.563790206892327 -0.231850239339047 2.20951468331088 -0.0608782827058945 -1.87088866158759 1.34892399657082 -0.100994607725964 -1.55950956738420 -0.646385597879762 0.309720148431888 -0.427656111460813 -0.152572739894624 -1.55759926619276 -0.50120270733094 1.46545236924817 -0.288204124486287 0.433889725874959 0.112959125714406 0.018399216738528 1.74244604200579 0.105317920948678 -1.69705125316729 0.472095749703597 1.51416504962968
HP0806 0.688190849829223 0.307324614562401 -0.179012270470620 -0.123933153370494 0.0401323018213678 0.146774847696078 -0.320811699600729 1.04796295514281 0.512406433552228 0.273339627415515 0.59092347282262 0.705769291456923 2.27845386908177 1.04210347460024 0.33193443284118 -0.255185517523984 0.398732511026438 -1.87005835505531 0.365919419988066 -0.246982244764391 1.64211428215905 -0.176668478253593 -1.03449642968533 -0.590347804558788 0.537016251831008 -0.0547912829682096 0.547563316807627 -0.702849830976065 -0.220028634268585 0.551079005133167 0.820615110091226 -1.30051684631785 1.14874602047495 -0.27862343969425
HP0807 -0.212236841044354 0.280905758310330 0.320654187487722 0.939594013249978 -0.134487166389674 0.255571594658805 -0.470383232734893 0.40451900509277 0.0306216932702642 1.06626483150760 1.16716469018868 0.164281246328310 1.92151125270908 0.234605390257543 -0.508821274137207 -0.0563006958099679 0.287457697185724 -2.48313885525605 0.214512777706333 -0.281250597198508 0.493625373798134 0.81685435831759 -0.473440804210077 -0.200443351068644 0.376127269966061 -0.417967721731738 1.20822350714115 -0.132303186764543 0.0808532246482878 0.735173520337674 1.46855387845682 -0.578271826216387 1.54411957348637 -0.319251842675796
HP0876 -0.985765667401486 0.216122082569567 0.279420462119408 1.36773581092285 0.0483683524045568 0.460459037375126 -0.161844784618989 0.85978585157227 -1.11522778524622 0.228104491867068 1.26953215211507 0.374237787864849 1.97336845476392 0.348710046317999 -1.42182117096706 1.32319250679518 0.448737115236267 -1.75967301572485 -0.174087681075131 -0.487193245761998 0.401067965204905 0.202576750320219 -1.4775654229163 0.304427229348975 1.29844622672425 -0.710691227876251 0.0527966341014592 -0.139963863293118 0.265614642711418 1.55606802662052 0.160898804937607 -0.172785245281924 1.46411605962013 1.12626421486234
HP1118 -0.417435058999739 -0.3881531143427 -0.120178954147976 0.650912255154059 -0.467125631751079 0.231204381736495 0.00670947269919397 1.6633576749626 -1.68720665912772 0.8842804807541 0.680194199811098 -0.117516959179155 2.34571571863724 -0.186728828368520 -0.806086324447715 0.689067516373837 0.291542934363122 -2.01285737698024 -0.342011868216456 -0.285222642214925 0.254275004799617 -0.97024268085839 -0.282560647246104 -0.597563385223345 0.520474501681793 -1.01372193201581 0.79377265181416 0.0102587993242896 -0.179630175118329 1.61899109214890 0.83902656628413 -1.11665240414359 0.693504174655207 1.26583309295188
HP1339 -0.423954383281467 0.0972351978488794 -0.25346482159177 0.807608371555952 1.03118898096481 -0.303564824369006 -0.264681240123987 1.32655466897986 -1.24125741366234 -0.256455866533695 0.207903860700087 0.68048896152416 1.24654421678337 0.489062085240991 -1.55307384885797 0.784427773256037 0.917529273171678 -2.41524255336771 -0.234023029469261 -0.526397672542382 0.336518793202841 0.735075531714282 -0.96907232394721 1.73931887096544 0.571315821143915 0.567577014966509 -0.639309619100033 -0.324502138962477 0.68048896152416 1.09848749215811 -0.275897658656204 1.15008301740631 0.326050135906105 0.989314351777866
HP1340 0.0626062306326251 0.32372002180772 -0.266006363703379 1.31133408910944 0.97916892618602 -0.295315054549563 -0.208277124157865 1.17456019849391 -1.32111923416601 -0.520015017703642 0.300628325989515 0.515558725528198 1.12215981182952 0.315726742486034 -1.23852201450858 0.662990321905973 1.06798314087143 -2.12133530848152 0.154973013905448 -0.707413010689849 0.397435819996608 0.337930296157385 -0.608829232389048 1.63550597271117 0.639010483940913 0.0848097843039767 -0.98273707621461 -0.612381800976464 0.432073363723916 0.934761818843317 -0.742050554417158 0.766014810941045 0.259773787234228 0.881473290032073
HP1432 -0.407819530772087 0.188724460348905 0.73536525221266 0.0820348619368813 0.208800460050092 1.20227564526313 -0.534585128885298 -0.131917934878628 0.152587660886768 0.245510859503692 0.547224455012962 0.648178053510361 2.06554363241418 0.95849564889157 0.258703659307329 1.4626900413871 0.141689261048981 -2.55939309874790 -0.35791633151485 -0.449692330148849 1.22464604493017 0.610894054065299 -0.56728032839866 0.403250857155877 0.566153254731225 -0.289084332539351 -0.080293935647004 -0.756568325581282 0.963658048814732 0.682020453006648 0.109567661527081 -0.106105935262816 0.426768456805839 1.31298044361539
HP1582 -0.670833493431994 -0.177552436144442 -0.0763755549832619 1.23752352805448 0.152235183418989 -0.0161595565067119 -0.184204203418014 1.68179156332624 -0.538148240974945 0.641665217548157 1.31034287504938 0.288421366020024 1.86944141904386 0.491825407385579 -1.48094872875023 0.71098363439907 0.35668950382774 -1.34861356930758 -0.751704979758058 -0.784613723111522 0.343385969280595 0.455415733888130 -1.75122053586591 0.857322514417662 0.708182890283881 -0.330192990422208 0.632562799173795 -0.326692060278223 0.244309646205807 1.24557566738565 0.624860752857027 0.0153488147891573 1.42727394185850 0.81181042254585
HP1583 -0.480476803340138 -0.182879705341170 -0.113780643008956 1.93681255336124 0.229359018799881 -0.129484975357187 -0.155397123731767 1.45311911703574 -0.229207485768450 0.364023668685957 1.50965471348937 0.292176348192803 1.89323303109490 0.32672587935891 -1.31202120117894 0.949795265274955 -0.52758980038483 -1.88051803218489 -0.555464990302939 -0.776503468104284 -0.507566776640836 0.37305365978619 -1.61275916564756 0.949010048657544 0.892474452203914 -0.519737634210715 -0.0548893967030916 0.0511148466474643 0.426840998078879 1.38873135440800 0.0503296300300528 -0.451423788495912 1.26074104576992 0.904252701465087
[+] Show/hide bicluster #10 motif PSSM #1.
bicluster 10 motif PSSM #1
Helicobacter pylori 26695
22x4
POSITION A C G T
1 0.8 0 0.2 0
2 0.266667 0.4 0.133333 0.2
3 0.6 0.066667 0 0.333333
4 0.533333 0.2 0.066667 0.2
5 0.133333 0.066667 0.133333 0.666667
6 0.866667 0 0 0.133333
7 1 0 0 0
8 0.266667 0 0.2 0.533333
9 0.6 0.133333 0.066667 0.2
10 0.666667 0.066667 0.133333 0.133333
11 0 0 0.266667 0.733333
12 0.266667 0.466667 0.066667 0.2
13 0.8 0 0.2 0
14 0 0 0.066667 0.933333
15 0 0.333333 0.066667 0.6
16 0.933333 0 0.066667 0
17 0 0 0 1
18 0 0 0.2 0.8
19 0.733333 0 0 0.266667
20 0.6 0 0 0.4
21 0.866667 0 0 0.133333
22 0.333333 0.066667 0.533333 0.066667
[+] Show/hide bicluster #10 motif PSSM #2.
bicluster 10 motif PSSM #2
Helicobacter pylori 26695
15x4
POSITION A C G T
1 1 0 0 0
2 0.777778 0.111111 0.111111 0
3 0 0 0.777778 0.222222
4 0 0.222222 0.777778 0
5 0.777778 0.222222 0 0
6 0 0 0.666667 0.333333
7 0 0.444444 0 0.555556
8 0.333333 0.222222 0 0.444444
9 1 0 0 0
10 0.333333 0 0.111111 0.555556
11 0.555556 0.222222 0.111111 0.111111
12 1 0 0 0
13 0 0 0 1
14 0 0 1 0
15 0.666667 0 0.333333 0
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