</td><td> <p><a href="#bicluster104" onclick="toggleVisible('bicluster104'); return false;">[+]</a> Show/hide bicluster #104 rows and columns.</p> <div id="bicluster104" style="display:none;" class="gaggle-data bicluster"> <span class="gaggle-name hidden">bicluster 104</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24x329</span> <div class="gaggle-cluster"> <ol class="gaggle-rowNames"> <li>b3322</li><li>b3323</li><li>b3324</li><li>b3325</li><li>b3326</li><li>b3327</li><li>b3328</li><li>b3329</li><li>b3330</li><li>b3331</li><li>b3332</li><li>b3333</li><li>b3334</li><li>b3335</li><li>b3575</li><li>b3576</li><li>b3577</li><li>b3578</li><li>b3579</li><li>b3580</li><li>b3582</li><li>b3678</li><li>b3679</li><li>b3680</li> </ol> <ol class="gaggle-columnNames"> <li>GC100</li><li>GC102</li><li>GC103</li><li>GC106</li><li>GC107</li><li>GC108</li><li>GC109</li><li>GC110</li><li>GC113</li><li>GC116</li><li>GC117</li><li>GC121</li><li>GC122</li><li>GC128</li><li>GC132</li><li>GC134</li><li>GC136</li><li>GC140</li><li>GC144</li><li>GC148</li><li>GC157</li><li>GC158</li><li>GC161</li><li>GC173</li><li>GC175</li><li>GC176</li><li>GC177</li><li>GC179</li><li>GC181</li><li>GC182</li><li>GC184</li><li>GC186</li><li>GC189</li><li>GC19</li><li>GC20</li><li>GC202</li><li>GC209</li><li>GC21</li><li>GC211</li><li>GC214</li><li>GC216</li><li>GC218</li><li>GC224</li><li>GC227</li><li>GC23</li><li>GC230</li><li>GC24</li><li>GC28</li><li>GC29</li><li>GC30</li><li>GC40</li><li>GC41</li><li>GC42</li><li>GC45</li><li>GC47</li><li>GC51</li><li>GC52</li><li>GC53</li><li>GC55</li><li>GC59</li><li>GC61</li><li>GC66</li><li>GC67</li><li>GC69</li><li>GC70</li><li>GC72</li><li>GC75</li><li>GC77</li><li>GC78</li><li>GC79</li><li>GC80</li><li>GC81</li><li>GC82</li><li>GC84</li><li>GC85</li><li>GC86</li><li>GC88</li><li>GC90</li><li>GC91</li><li>GC93</li><li>GC94</li><li>GC96</li><li>GC97</li><li>GSM18235</li><li>GSM18237</li><li>GSM18246</li><li>GSM18247</li><li>GSM18248</li><li>GSM18249</li><li>GSM18250</li><li>GSM18251</li><li>GSM18252</li><li>GSM18253</li><li>GSM18254</li><li>GSM18256</li><li>GSM18257</li><li>GSM18258</li><li>GSM18259</li><li>GSM18260</li><li>GSM18262</li><li>GSM18264</li><li>GSM18265</li><li>GSM18266</li><li>GSM18271</li><li>GSM18272</li><li>GSM18273</li><li>GSM18274</li><li>GSM18275</li><li>GSM18276</li><li>GSM18277</li><li>GSM18278</li><li>GSM18280</li><li>GSM18281</li><li>GSM18282</li><li>GSM18283</li><li>GSM18284</li><li>GSM18285</li><li>GSM18286</li><li>GSM18287</li><li>GSM18288</li><li>GSM18289</li><li>JC1</li><li>JC10</li><li>JC100</li><li>JC101</li><li>JC102</li><li>JC103</li><li>JC104</li><li>JC105</li><li>JC106</li><li>JC107</li><li>JC108</li><li>JC109</li><li>JC11</li><li>JC110</li><li>JC111</li><li>JC112</li><li>JC119</li><li>JC12</li><li>JC121</li><li>JC122</li><li>JC124</li><li>JC125</li><li>JC128</li><li>JC13</li><li>JC14</li><li>JC15</li><li>JC16</li><li>JC17</li><li>JC18</li><li>JC2</li><li>JC20</li><li>JC21</li><li>JC22</li><li>JC23</li><li>JC24</li><li>JC26</li><li>JC27</li><li>JC29</li><li>JC3</li><li>JC31</li><li>JC32</li><li>JC33</li><li>JC34</li><li>JC35</li><li>JC36</li><li>JC37</li><li>JC38</li><li>JC39</li><li>JC4</li><li>JC40</li><li>JC41</li><li>JC42</li><li>JC43</li><li>JC44</li><li>JC45</li><li>JC46</li><li>JC47</li><li>JC48</li><li>JC49</li><li>JC5</li><li>JC50</li><li>JC51</li><li>JC52</li><li>JC53</li><li>JC54</li><li>JC55</li><li>JC57</li><li>JC58</li><li>JC59</li><li>JC6</li><li>JC61</li><li>JC62</li><li>JC64</li><li>JC65</li><li>JC66</li><li>JC67</li><li>JC68</li><li>JC69</li><li>JC70</li><li>JC71</li><li>JC72</li><li>JC73</li><li>JC74</li><li>JC75</li><li>JC76</li><li>JC77</li><li>JC78</li><li>JC79</li><li>JC8</li><li>JC80</li><li>JC83</li><li>JC84</li><li>JC85</li><li>JC86</li><li>JC87</li><li>JC88</li><li>JC89</li><li>JC9</li><li>MGD1_t0_B</li><li>MGD1_t30_A</li><li>MGD1_t30_B</li><li>Rep18_FC2.1</li><li>Rep1_FA1.1</li><li>Rep24_FC2.5</li><li>Rep27_FE2.2</li><li>Rep2_FB1.1</li><li>Rep5_FA2.2</li><li>X10_FB1.2</li><li>X11_FB2.2</li><li>X12_FB2.2</li><li>X13_FB1.5</li><li>X14_FB2.5</li><li>X15_FB2.5</li><li>X16_FC1.1</li><li>X17_FC2.1</li><li>X19_FC1.2</li><li>X1_FA1.1</li><li>X20_FC2.2</li><li>X21_FC2.2</li><li>X25_FE1.2</li><li>X26_FE2.2</li><li>X29_FE2.5</li><li>X2_FB1.1</li><li>X30_FE2.5</li><li>X3_FG1.1</li><li>X4_FA1.2</li><li>X6_FA2.2</li><li>X9_FA2.5</li><li>cybr4252003_KNO3_1</li><li>cybr4252003_KNO3_2</li><li>cybr4252003_aerobic1</li><li>cybr4252003_aerobic2</li><li>cybr4252003_anaerobic1</li><li>cybr4252003_anaerobic2</li><li>cybr9202003_AerL1</li><li>cybr9202003_AerL2</li><li>cybr9202003_AerS1</li><li>cybr9202003_AerS2</li><li>cybr9202003_AnL1</li><li>cybr9202003_AnL2</li><li>cybr9202003_AnS1</li><li>cybr9202003_AnS2</li><li>kaffy011503.1</li><li>kaffy011503.2</li><li>kaffy013003.1</li><li>kaffy013003.2</li><li>kaffy032502.1</li><li>kaffy032502.2</li><li>kaffy040302.2</li><li>kaffy040402.1</li><li>kaffy040402.3</li><li>kaffy041502.1</li><li>kaffy041502.2</li><li>kaffy041502.3</li><li>kaffy042202.1</li><li>kaffy042202.3</li><li>kaffy042202.4</li><li>kaffy042902.1</li><li>kaffy042902.2</li><li>kaffy050703.1</li><li>kaffy050703.5</li><li>kaffy050703.6</li><li>kaffy050903.1</li><li>kaffy050903.2</li><li>kaffy051202.1</li><li>kaffy051202.2</li><li>kaffy051202.3</li><li>kaffy051202.4</li><li>kaffy051302.2</li><li>kaffy051302.3</li><li>kaffy051902.1</li><li>kaffy051902.3</li><li>kaffy051902.4</li><li>kaffy062502.1</li><li>kaffy071702.3</li><li>kaffy071702.4</li><li>kaffy071802.1</li><li>kaffy071802.2</li><li>kaffy072802.4</li><li>kaffy073002.5</li><li>kaffy080502.7</li><li>kaffy082502.2</li><li>kaffy090502.5</li><li>kaffy090502.6</li><li>kaffy090502.7</li><li>kaffy090502.8</li><li>kaffy111502.1</li><li>kaffy111502.2</li><li>pET3d_t30_A</li><li>pH5_1_Ecoli_ASv2_101603</li><li>pH5_2_Ecoli_ASv2_101603</li><li>pH5_4_Ecoli_ASv2_101603</li><li>pH5_5_EcoliAsv2_112603</li><li>pH5_6_EcoliAsv2_012104</li><li>pH7_2_EcoliASv2_043103</li><li>pH7_3_EcoliASv2_043103</li><li>pH7_5_EcoliASv2_043103</li><li>pH7_7_EcoliASv2_043103</li><li>pH8.7_1_EcoliASv2_110303</li><li>pH8.7_2_EcoliASv2_110303</li><li>pH8.7_3_EcoliAsv2_080503</li><li>pH8.7_4_EcoliAsv2_080503</li><li>pH8.7_6_EcoliASv2_110303</li><li>pepAA_t0_A</li><li>pepAA_t0_B</li><li>pepCO_t0_A</li><li>pepCO_t30_A</li><li>pepCO_t30_B</li> </ol> </div> </div> <p><a href="#bicluster104_genes" onclick="toggleVisible('bicluster104_genes'); return false;">[+]</a> Show/hide bicluster #104 rows (genes).</p> <div id="bicluster104_genes" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 104 genes</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24</span> <div class="gaggle-namelist"> <ol> <li>b3322</li><li>b3323</li><li>b3324</li><li>b3325</li><li>b3326</li><li>b3327</li><li>b3328</li><li>b3329</li><li>b3330</li><li>b3331</li><li>b3332</li><li>b3333</li><li>b3334</li><li>b3335</li><li>b3575</li><li>b3576</li><li>b3577</li><li>b3578</li><li>b3579</li><li>b3580</li><li>b3582</li><li>b3678</li><li>b3679</li><li>b3680</li> </ol> </div> </div> <p><a href="#bicluster104_short_names" onclick="toggleVisible('bicluster104_short_names'); return false;">[+]</a> Show/hide bicluster #104 rows (short gene names).</p> <div id="bicluster104_short_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 104 short names</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24</span> <span class="gaggle-namelist-tag hidden">short_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color: green; border-collapse: collapse" border="1"> <tr> <td>b3323</td><td class="short_name">gspA</td></tr> <tr> <td>b3324</td><td class="short_name">gspC</td></tr> <tr> <td>b3325</td><td class="short_name">gspD</td></tr> <tr> <td>b3326</td><td class="short_name">gspE</td></tr> <tr> <td>b3327</td><td class="short_name">gspF</td></tr> <tr> <td>b3328</td><td class="short_name">gspG</td></tr> <tr> <td>b3329</td><td class="short_name">gspH</td></tr> <tr> <td>b3330</td><td class="short_name">gspI</td></tr> <tr> <td>b3331</td><td class="short_name">gspJ</td></tr> <tr> <td>b3332</td><td class="short_name">gspK</td></tr> <tr> <td>b3333</td><td class="short_name">gspL</td></tr> <tr> <td>b3334</td><td class="short_name">gspM</td></tr> <tr> <td>b3335</td><td class="short_name">gspO</td></tr> <tr> <td>b3580</td><td class="short_name">lyx</td></tr> <tr> <td>b3322</td><td class="short_name">gspB</td></tr> <tr> <td>b3582</td><td class="short_name">sgbU</td></tr> <tr> <td>b3575</td><td class="short_name">yiaK</td></tr> <tr> <td>b3576</td><td class="short_name">yiaL</td></tr> <tr> <td>b3577</td><td class="short_name">yiaM</td></tr> <tr> <td>b3578</td><td class="short_name">yiaN</td></tr> <tr> <td>b3579</td><td class="short_name">yiaO</td></tr> <tr> <td>b3678</td><td class="short_name">yidJ</td></tr> <tr> <td>b3679</td><td class="short_name">yidK</td></tr> <tr> <td>b3680</td><td class="short_name">yidL</td></tr> </table> </div> <p><a href="#bicluster104_long_names" onclick="toggleVisible('bicluster104_long_names'); return false;">[+]</a> Show/hide bicluster #104 rows (long gene names).</p> <div id="bicluster104_long_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 104 long names</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24</span> <span class="gaggle-namelist-tag hidden">long_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>b3323</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3324</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3325</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3326</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3327</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3328</td><td class="long_name">pseudopilin, cryptic, general secretion pathway</td></tr> <tr> <td>b3329</td><td class="long_name">predicted general secretory pathway component, cryptic</td></tr> <tr> <td>b3330</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3331</td><td class="long_name">predicted general secretory pathway component, cryptic</td></tr> <tr> <td>b3332</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3333</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3334</td><td class="long_name">general secretory pathway component, cryptic</td></tr> <tr> <td>b3335</td><td class="long_name">bifunctional prepilin leader peptidase/ methylase</td></tr> <tr> <td>b3580</td><td class="long_name">L-xylulose kinase</td></tr> <tr> <td>b3322</td><td class="long_name">part of gsp divergon involved in type II protein secretion</td></tr> <tr> <td>b3582</td><td class="long_name">predicted L-xylulose 5-phosphate 3-epimerase</td></tr> <tr> <td>b3575</td><td class="long_name">2,3-diketo-L-gulonate dehydrogenase, NADH-dependent</td></tr> <tr> <td>b3576</td><td class="long_name">conserved protein</td></tr> <tr> <td>b3577</td><td class="long_name">predicted transporter</td></tr> <tr> <td>b3578</td><td class="long_name">predicted transporter</td></tr> <tr> <td>b3579</td><td class="long_name">predicted transporter</td></tr> <tr> <td>b3678</td><td class="long_name">predicted sulfatase/phosphatase</td></tr> <tr> <td>b3679</td><td class="long_name">predicted transporter</td></tr> <tr> <td>b3680</td><td class="long_name">predicted DNA-binding transcriptional regulator</td></tr> </table> </div> <p><a href="#bicluster104_refseq_names" onclick="toggleVisible('bicluster104_refseq_names'); return false;">[+]</a> Show/hide bicluster #104 rows (NCBI RefSeq gene IDs).</p> <div id="bicluster104_refseq_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 104 NCBI RefSeq IDs</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">46</span> <div class="gaggle-namelist"> <ol> <li>NP_417781</li><li>NP_417781.1</li><li>NP_417782</li><li>NP_417782.1</li><li>NP_417783</li><li>NP_417783.1</li><li>NP_417784</li><li>NP_417784.4</li><li>NP_417785</li><li>NP_417785.1</li><li>NP_417786</li><li>NP_417786.1</li><li>NP_417787</li><li>NP_417787.1</li><li>NP_417788</li><li>NP_417788.1</li><li>NP_417789</li><li>NP_417789.4</li><li>NP_417790</li><li>NP_417790.1</li><li>NP_417791</li><li>NP_417791.1</li><li>NP_417792</li><li>NP_417792.2</li><li>NP_417793</li><li>NP_417793.2</li><li>NP_417794</li><li>NP_417794.1</li><li>NP_418032</li><li>NP_418032.1</li><li>NP_418033</li><li>NP_418033.1</li><li>NP_418034</li><li>NP_418034.1</li><li>NP_418036</li><li>NP_418036.1</li><li>NP_418037</li><li>NP_418037.1</li><li>NP_418039</li><li>NP_418039.2</li><li>NP_418134</li><li>NP_418134.1</li><li>NP_418135</li><li>NP_418135.1</li><li>NP_418136</li><li>NP_418136.1</li> </ol> </div> </div> <p><a href="#bicluster104_upstream_seqs" onclick="toggleVisible('bicluster104_upstream_seqs'); return false;">[+]</a> Show/hide bicluster #104 gene upstream sequences.</p> <div id="bicluster104_upstream_seqs" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 104 upstream sequences</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24</span> <span class="gaggle-namelist-tag hidden">upstream</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>b3323</td><td class="upstream">TGGGTTGTATATTGACGTTAGTATAAATAGTATTAATGCCGCTTGCATGAATCAAGCAAAATTTATTTATATTAGTAATATGTATTTAATTAATAAATACATACATTATTTTTATGATTAAGGATAATCAATAATTAAAACAGGAAGTTCTATGTCTACGAGAAGAGAAGT</td></tr> <tr> <td>b3324</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3325</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3326</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3327</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3328</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3329</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3330</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3331</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3332</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3333</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3334</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3335</td><td class="upstream">CCTTAATCATAAAAATAATGTATGTATTTATTAATTAAATACATATTACTAATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCC</td></tr> <tr> <td>b3580</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3322</td><td class="upstream">TGGGTTGTATATTGACGTTAGTATAAATAGTATTAATGCCGCTTGCATGAATCAAGCAAAATTTATTTATATTAGTAATATGTATTTAATTAATAAATACATACATTATTTTTATGATTAAGGATAATCAATAATTAAAACAGGAAGTTCTATGTCTACGAGAAGAGAAGT</td></tr> <tr> <td>b3582</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3575</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3576</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3577</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3578</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3579</td><td class="upstream">GACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA</td></tr> <tr> <td>b3678</td><td class="upstream">GCGAATTATGCTCACAACCTGAACTTAACAGAAAACAATCCGTTCAGGGATACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAAACATAAATAAGGGCTATGAGATGAATTCGTTACAAATCTT</td></tr> <tr> <td>b3679</td><td class="upstream">GCGAATTATGCTCACAACCTGAACTTAACAGAAAACAATCCGTTCAGGGATACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAAACATAAATAAGGGCTATGAGATGAATTCGTTACAAATCTT</td></tr> <tr> <td>b3680</td><td class="upstream">TTGTAACGAATTCATCTCATAGCCCTTATTTATGTTTATGTCCCGGACGCATGAATATAGGGAGAGGTAAAATGCGTCGGGTCAGGCAGTCAGATTCTTAAAATACAAACGTCGTATCCCTGAACGGATTGTTTTCTGTTAAGTTCAGGTTGTGAGCATAATTCGCCGGAG</td></tr> </table> </div> <p><a href="#bicluster104_arrays" onclick="toggleVisible('bicluster104_arrays'); return false;">[+]</a> Show/hide bicluster #104 columns (arrays; conditions).</p> <div id="bicluster104_arrays" style="display:none;" class="gaggle-data arrays"> <span class="gaggle-name hidden">bicluster 104 arrays</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">329</span> <div class="gaggle-namelist"> <ol> <li>GC100</li><li>GC102</li><li>GC103</li><li>GC106</li><li>GC107</li><li>GC108</li><li>GC109</li><li>GC110</li><li>GC113</li><li>GC116</li><li>GC117</li><li>GC121</li><li>GC122</li><li>GC128</li><li>GC132</li><li>GC134</li><li>GC136</li><li>GC140</li><li>GC144</li><li>GC148</li><li>GC157</li><li>GC158</li><li>GC161</li><li>GC173</li><li>GC175</li><li>GC176</li><li>GC177</li><li>GC179</li><li>GC181</li><li>GC182</li><li>GC184</li><li>GC186</li><li>GC189</li><li>GC19</li><li>GC20</li><li>GC202</li><li>GC209</li><li>GC21</li><li>GC211</li><li>GC214</li><li>GC216</li><li>GC218</li><li>GC224</li><li>GC227</li><li>GC23</li><li>GC230</li><li>GC24</li><li>GC28</li><li>GC29</li><li>GC30</li><li>GC40</li><li>GC41</li><li>GC42</li><li>GC45</li><li>GC47</li><li>GC51</li><li>GC52</li><li>GC53</li><li>GC55</li><li>GC59</li><li>GC61</li><li>GC66</li><li>GC67</li><li>GC69</li><li>GC70</li><li>GC72</li><li>GC75</li><li>GC77</li><li>GC78</li><li>GC79</li><li>GC80</li><li>GC81</li><li>GC82</li><li>GC84</li><li>GC85</li><li>GC86</li><li>GC88</li><li>GC90</li><li>GC91</li><li>GC93</li><li>GC94</li><li>GC96</li><li>GC97</li><li>GSM18235</li><li>GSM18237</li><li>GSM18246</li><li>GSM18247</li><li>GSM18248</li><li>GSM18249</li><li>GSM18250</li><li>GSM18251</li><li>GSM18252</li><li>GSM18253</li><li>GSM18254</li><li>GSM18256</li><li>GSM18257</li><li>GSM18258</li><li>GSM18259</li><li>GSM18260</li><li>GSM18262</li><li>GSM18264</li><li>GSM18265</li><li>GSM18266</li><li>GSM18271</li><li>GSM18272</li><li>GSM18273</li><li>GSM18274</li><li>GSM18275</li><li>GSM18276</li><li>GSM18277</li><li>GSM18278</li><li>GSM18280</li><li>GSM18281</li><li>GSM18282</li><li>GSM18283</li><li>GSM18284</li><li>GSM18285</li><li>GSM18286</li><li>GSM18287</li><li>GSM18288</li><li>GSM18289</li><li>JC1</li><li>JC10</li><li>JC100</li><li>JC101</li><li>JC102</li><li>JC103</li><li>JC104</li><li>JC105</li><li>JC106</li><li>JC107</li><li>JC108</li><li>JC109</li><li>JC11</li><li>JC110</li><li>JC111</li><li>JC112</li><li>JC119</li><li>JC12</li><li>JC121</li><li>JC122</li><li>JC124</li><li>JC125</li><li>JC128</li><li>JC13</li><li>JC14</li><li>JC15</li><li>JC16</li><li>JC17</li><li>JC18</li><li>JC2</li><li>JC20</li><li>JC21</li><li>JC22</li><li>JC23</li><li>JC24</li><li>JC26</li><li>JC27</li><li>JC29</li><li>JC3</li><li>JC31</li><li>JC32</li><li>JC33</li><li>JC34</li><li>JC35</li><li>JC36</li><li>JC37</li><li>JC38</li><li>JC39</li><li>JC4</li><li>JC40</li><li>JC41</li><li>JC42</li><li>JC43</li><li>JC44</li><li>JC45</li><li>JC46</li><li>JC47</li><li>JC48</li><li>JC49</li><li>JC5</li><li>JC50</li><li>JC51</li><li>JC52</li><li>JC53</li><li>JC54</li><li>JC55</li><li>JC57</li><li>JC58</li><li>JC59</li><li>JC6</li><li>JC61</li><li>JC62</li><li>JC64</li><li>JC65</li><li>JC66</li><li>JC67</li><li>JC68</li><li>JC69</li><li>JC70</li><li>JC71</li><li>JC72</li><li>JC73</li><li>JC74</li><li>JC75</li><li>JC76</li><li>JC77</li><li>JC78</li><li>JC79</li><li>JC8</li><li>JC80</li><li>JC83</li><li>JC84</li><li>JC85</li><li>JC86</li><li>JC87</li><li>JC88</li><li>JC89</li><li>JC9</li><li>MGD1_t0_B</li><li>MGD1_t30_A</li><li>MGD1_t30_B</li><li>Rep18_FC2.1</li><li>Rep1_FA1.1</li><li>Rep24_FC2.5</li><li>Rep27_FE2.2</li><li>Rep2_FB1.1</li><li>Rep5_FA2.2</li><li>X10_FB1.2</li><li>X11_FB2.2</li><li>X12_FB2.2</li><li>X13_FB1.5</li><li>X14_FB2.5</li><li>X15_FB2.5</li><li>X16_FC1.1</li><li>X17_FC2.1</li><li>X19_FC1.2</li><li>X1_FA1.1</li><li>X20_FC2.2</li><li>X21_FC2.2</li><li>X25_FE1.2</li><li>X26_FE2.2</li><li>X29_FE2.5</li><li>X2_FB1.1</li><li>X30_FE2.5</li><li>X3_FG1.1</li><li>X4_FA1.2</li><li>X6_FA2.2</li><li>X9_FA2.5</li><li>cybr4252003_KNO3_1</li><li>cybr4252003_KNO3_2</li><li>cybr4252003_aerobic1</li><li>cybr4252003_aerobic2</li><li>cybr4252003_anaerobic1</li><li>cybr4252003_anaerobic2</li><li>cybr9202003_AerL1</li><li>cybr9202003_AerL2</li><li>cybr9202003_AerS1</li><li>cybr9202003_AerS2</li><li>cybr9202003_AnL1</li><li>cybr9202003_AnL2</li><li>cybr9202003_AnS1</li><li>cybr9202003_AnS2</li><li>kaffy011503.1</li><li>kaffy011503.2</li><li>kaffy013003.1</li><li>kaffy013003.2</li><li>kaffy032502.1</li><li>kaffy032502.2</li><li>kaffy040302.2</li><li>kaffy040402.1</li><li>kaffy040402.3</li><li>kaffy041502.1</li><li>kaffy041502.2</li><li>kaffy041502.3</li><li>kaffy042202.1</li><li>kaffy042202.3</li><li>kaffy042202.4</li><li>kaffy042902.1</li><li>kaffy042902.2</li><li>kaffy050703.1</li><li>kaffy050703.5</li><li>kaffy050703.6</li><li>kaffy050903.1</li><li>kaffy050903.2</li><li>kaffy051202.1</li><li>kaffy051202.2</li><li>kaffy051202.3</li><li>kaffy051202.4</li><li>kaffy051302.2</li><li>kaffy051302.3</li><li>kaffy051902.1</li><li>kaffy051902.3</li><li>kaffy051902.4</li><li>kaffy062502.1</li><li>kaffy071702.3</li><li>kaffy071702.4</li><li>kaffy071802.1</li><li>kaffy071802.2</li><li>kaffy072802.4</li><li>kaffy073002.5</li><li>kaffy080502.7</li><li>kaffy082502.2</li><li>kaffy090502.5</li><li>kaffy090502.6</li><li>kaffy090502.7</li><li>kaffy090502.8</li><li>kaffy111502.1</li><li>kaffy111502.2</li><li>pET3d_t30_A</li><li>pH5_1_Ecoli_ASv2_101603</li><li>pH5_2_Ecoli_ASv2_101603</li><li>pH5_4_Ecoli_ASv2_101603</li><li>pH5_5_EcoliAsv2_112603</li><li>pH5_6_EcoliAsv2_012104</li><li>pH7_2_EcoliASv2_043103</li><li>pH7_3_EcoliASv2_043103</li><li>pH7_5_EcoliASv2_043103</li><li>pH7_7_EcoliASv2_043103</li><li>pH8.7_1_EcoliASv2_110303</li><li>pH8.7_2_EcoliASv2_110303</li><li>pH8.7_3_EcoliAsv2_080503</li><li>pH8.7_4_EcoliAsv2_080503</li><li>pH8.7_6_EcoliASv2_110303</li><li>pepAA_t0_A</li><li>pepAA_t0_B</li><li>pepCO_t0_A</li><li>pepCO_t30_A</li><li>pepCO_t30_B</li> </ol> </div> </div> <p><a href="#bicluster104_ratios" onclick="toggleVisible('bicluster104_ratios'); return false;">[+]</a> Show/hide bicluster #104 ratios.</p> <div id="bicluster104_ratios" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 104 ratios</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24x329</span> <div class="gaggle-matrix-tsv"> GENES pepAA_t0_B JC32 GC40 GSM18271 kaffy050703.5 GC82 JC24 kaffy051302.3 GC42 kaffy042202.4 JC104 JC4 X26_FE2.2 JC43 GSM18286 JC78 JC85 JC39 JC22 GC20 JC79 JC122 JC35 JC89 cybr4252003_KNO3_1 cybr4252003_anaerobic1 cybr4252003_anaerobic2 GC108 cybr9202003_AnS1 Rep1_FA1.1 kaffy011503.1 Rep24_FC2.5 MGD1_t30_A GC28 GSM18272 JC76 GC45 kaffy051202.3 GSM18289 JC119 JC1 kaffy051202.1 cybr9202003_AnL1 GSM18253 GSM18254 X19_FC1.2 JC10 GC181 JC3 kaffy050903.2 Rep2_FB1.1 X29_FE2.5 GSM18257 pH7_7_EcoliASv2_043103 GC19 X4_FA1.2 GC102 GSM18282 pepCO_t30_B GC21 GC41 kaffy080502.7 JC128 GSM18278 JC52 pH5_1_Ecoli_ASv2_101603 GC85 GSM18287 JC105 JC112 GC157 cybr4252003_aerobic1 GC214 pH5_6_EcoliAsv2_012104 GSM18274 JC14 GSM18258 kaffy071702.3 JC15 X10_FB1.2 JC20 GSM18281 JC55 JC77 JC2 kaffy051302.2 GC189 GC70 GSM18237 GSM18250 GSM18277 GC144 GC69 JC111 JC23 GC86 GC91 kaffy040302.2 JC109 JC54 pH8.7_6_EcoliASv2_110303 GC30 kaffy051902.4 GSM18276 JC34 X12_FB2.2 JC21 pH8.7_3_EcoliAsv2_080503 GSM18247 JC46 JC41 GC51 GSM18259 GSM18288 GSM18273 X3_FG1.1 JC6 JC124 kaffy071802.1 kaffy050703.6 X1_FA1.1 kaffy041502.1 kaffy071702.4 JC59 JC102 JC86 JC103 GSM18266 GSM18251 kaffy111502.2 X9_FA2.5 pH5_2_Ecoli_ASv2_101603 GC94 cybr9202003_AerS2 GSM18275 GSM18252 GC110 GSM18285 JC42 GC175 GC67 cybr9202003_AnS2 Rep18_FC2.1 Rep27_FE2.2 JC50 JC74 JC101 GSM18246 kaffy073002.5 X30_FE2.5 GC106 JC72 cybr4252003_aerobic2 GC176 GC29 JC65 kaffy041502.2 JC44 GSM18262 GC107 JC61 JC100 GSM18280 pepAA_t0_A pH5_4_Ecoli_ASv2_101603 kaffy032502.1 kaffy011503.2 GSM18256 JC125 JC18 kaffy090502.8 X11_FB2.2 JC37 JC49 JC40 JC9 JC84 kaffy042902.1 kaffy050703.1 GC78 kaffy040402.1 JC5 GC202 GC79 pH7_5_EcoliASv2_043103 JC88 GSM18283 GSM18264 kaffy090502.5 GC173 pH8.7_1_EcoliASv2_110303 kaffy051902.1 GC121 MGD1_t0_B JC45 GC140 JC73 JC26 kaffy042202.3 X16_FC1.1 X17_FC2.1 GC84 JC71 X25_FE1.2 JC53 JC11 GC61 GSM18248 JC17 GC209 X13_FB1.5 GC90 pepCO_t0_A JC110 X15_FB2.5 JC47 GC52 pH7_3_EcoliASv2_043103 kaffy032502.2 JC108 JC48 GSM18284 GSM18265 GC109 GC93 kaffy041502.3 JC64 JC87 JC16 GC59 JC62 kaffy013003.1 GC122 kaffy050903.1 kaffy051202.2 kaffy090502.6 X21_FC2.2 pH8.7_2_EcoliASv2_110303 JC69 cybr9202003_AnL2 GSM18260 GC100 JC75 GC161 GC134 pepCO_t30_A kaffy051902.3 GC75 GC158 kaffy042902.2 GC128 kaffy051202.4 GC81 JC107 GC66 GC230 GC116 kaffy040402.3 kaffy082502.2 JC33 cybr9202003_AerL2 JC38 GC72 JC57 kaffy111502.1 kaffy071802.2 GC103 kaffy072802.4 GC224 JC70 GC117 X14_FB2.5 JC83 GC148 GSM18249 Rep5_FA2.2 GC53 pH5_5_EcoliAsv2_112603 pH7_2_EcoliASv2_043103 GSM18235 GC113 GC132 GC179 GC24 GC77 JC68 JC51 JC8 JC29 GC218 GC182 GC227 pET3d_t30_A JC106 GC55 JC58 JC36 GC80 kaffy042202.1 GC136 GC184 GC97 kaffy062502.1 GC186 GC23 kaffy090502.7 X2_FB1.1 JC13 pH8.7_4_EcoliAsv2_080503 cybr4252003_KNO3_2 cybr9202003_AerS1 GC88 cybr9202003_AerL1 X20_FC2.2 kaffy013003.2 JC67 GC47 X6_FA2.2 MGD1_t30_B JC121 GC216 GC96 JC66 GC211 JC31 JC27 JC12 GC177 JC80 b3323 0.602860835690718 -0.429460869161348 -0.63167760126167 -0.801082582961634 0.41168906164817 1.31144189491849 -1.27022892642100 0.575982812757569 -0.370534842927582 -0.151192550860018 -1.08590150138765 -0.574132194785125 0.524106759752172 -0.333258109482592 -0.218842918963889 -0.928334599733657 -0.228624756818248 -0.726382241629397 -1.20219668476726 -0.217697298314278 -0.6101458080267 -0.274332083248826 0.297831994010046 0.00857746742784512 -0.111947699888777 -0.4247021372322 -0.0288167655709491 -0.67109870156362 -1.23163032299569 -0.276006451890562 0.234088486070229 0.691044250822207 1.89714779575352 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-0.761130753642138 1.35527937818766 0.710057178662782 -0.206890201156423 1.78147632016174 -0.308505660499919 0.226187442896942 0.152282447381805 -0.707555105179406 -1.68483373186645 0.0447558394338389 1.62587862541447 1.32503556495738 0.0241762850330953 0.427979669330993 -2.02530338111646 -0.44271062696435 -0.661016538388665 1.25363264292562 -0.482243388001648 </div> </div> <p><a href="#bicluster104_pssm1" onclick="toggleVisible('bicluster104_pssm1'); return false;">[+]</a> Show/hide bicluster #104 motif PSSM #1.</p> <div id="bicluster104_pssm1" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 104 motif PSSM #1</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">23x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 0 0.8 0 0.2 2 0 1 0 0 3 0 0 0.8 0.2 4 0 0.4 0.6 0 5 0.6 0 0 0.4 6 0 0.4 0 0.6 7 0 0 0.8 0.2 8 0 0.8 0.2 0 9 1 0 0 0 10 0 0 0 1 11 0 0 1 0 12 1 0 0 0 13 1 0 0 0 14 0 0 0 1 15 0.4 0.4 0 0.2 16 0.4 0 0 0.6 17 0.8 0.2 0 0 18 0.2 0 0.8 0 19 0.2 0.4 0.4 0 20 0.6 0 0.4 0 21 1 0 0 0 22 0.4 0 0.6 0 23 1 0 0 0 </div> </div> <p><a href="#bicluster104_pssm2" onclick="toggleVisible('bicluster104_pssm2'); return false;">[+]</a> Show/hide bicluster #104 motif PSSM #2.</p> <div id="bicluster104_pssm2" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 104 motif PSSM #2</span> <span class="gaggle-species hidden">Escherichia coli K12</span> <span class="gaggle-size hidden">24x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 1 0 0 0 2 0 0.4 0 0.6 3 0.8 0 0 0.2 4 0.4 0 0 0.6 5 1 0 0 0 6 0.4 0 0 0.6 7 1 0 0 0 8 0.2 0.8 0 0 9 0.8 0.2 0 0 10 0 0.2 0 0.8 11 1 0 0 0 12 0.6 0.4 0 0 13 0.8 0 0 0.2 14 0 0 0 1 15 0.4 0 0.2 0.4 16 1 0 0 0 17 0 0 0.4 0.6 18 0 0 0.4 0.6 19 0 0 0.4 0.6 20 0 0.4 0 0.6 21 0 0 0 1 22 1 0 0 0 23 0 0 0 1 24 0 0 1 0 </div> </div> </td></table> </html>