[+] Show/hide bicluster #400 rows and columns.
bicluster 400
Arabidopsis thaliana
7x72
[+] Show/hide bicluster #400 rows (genes).
bicluster 400 genes
Arabidopsis thaliana
7
[+] Show/hide bicluster #400 rows (short gene names).
bicluster 400 short names
Arabidopsis thaliana
7
short_name
[+] Show/hide bicluster #400 rows (long gene names).
bicluster 400 long names
Arabidopsis thaliana
7
long_name
[+] Show/hide bicluster #400 rows (NCBI RefSeq gene IDs).
bicluster 400 NCBI RefSeq IDs
Arabidopsis thaliana
7
[+] Show/hide bicluster #400 gene upstream sequences.
bicluster 400 upstream sequences
Arabidopsis thaliana
7
upstream
[+] Show/hide bicluster #400 columns (arrays; conditions).
bicluster 400 arrays
Arabidopsis thaliana
72
[+] Show/hide bicluster #400 ratios.
bicluster 400 ratios
Arabidopsis thaliana
7x72
GENES NaCl_24_R Wound_3_R Heat_24_R Wound_24_R Osmo_6_R Oxid_1_R UV_6_R Drougt_24_R Gtoxic_24_R Oxid_12_R Osmo_24_R Osmo_3_R UV_24_R Drougt_1_R Cold_3_R Cold_12_R Oxid_05_R NaCl_6_R NaCl_3_R Heat_3_S Wound_12_R UV_05_R UV_3_R Cold_6_R Drougt_6_S Heat_1_R Drougt_12_R Heat_05_R UV_1_R Gtoxic_12_R Gtoxic_05_R Gtoxic_6_S Drougt_3_R Wound_6_S Osmo_12_R NaCl_12_R Heat_24_S Osmo_05_R Heat_1_S Drougt_24_S Heat_3_R Oxid_3_S Heat_12_S Wound_1_R Wound_3_S Oxid_24_R Gtoxic_3_S Osmo_1_R Oxid_6_R Gtoxic_3_R UV_12_S Gtoxic_6_R Heat_6_R Osmo_6_S NaCl_05_S Wound_24_S Gtoxic_12_S Drougt_6_R Cold_05_R Cold_24_R UV_12_R Heat_6_S Heat_12_R NaCl_05_R Wound_05_S Osmo_05_S Cold_1_S Cold_3_S UV_1_S Cold_1_R Osmo_1_S UV_24_S
AT1G29440 0.159430819945935 0.238062793982091 -0.0257294273413782 0.165120053684205 0.396080567790715 0.0450383450891748 0.104711748667025 0.190858545994978 -0.102759814777785 0.122621394872469 0.115064449400204 0.309320665229527 -0.0877371205947245 0.0206568386256386 0.389584043064063 0.337349440579492 0.0835545067737125 0.580573840852854 0.222455638900109 1.04567613937751 0.0049263349577668 -0.0530685049770274 0.0346997116623602 0.226470278767579 0.0889334290771906 0.326450655431231 0.227632537848245 0.0676106528284907 0.0467070473859455 -0.0533593965241498 -0.166491883027703 0.20559567295043 0.255290185417694 -0.0708025515921653 0.51506590664225 0.978569226726708 0.0130835891281380 -0.120664643357250 1.67065434774446 -0.210931293143674 0.80104028672997 0.145009850578569 -0.315269431029992 -0.272078639952535 0.163297721302066 0.118393989141109 0.229961903916046 0.144673911755631 -0.125882860034166 0.253140633984425 -0.927399418499876 -0.124872874472911 -0.0604664960444103 -3.09607624653136 0.245768339950315 -0.00492633495776678 -0.746759427638757 -0.0458090653202781 -0.0109365560222981 0.484887958365142 0.130866195995901 0.128441264701253 -0.108092082920772 0.269003454310013 -0.585088399500156 -1.29374275944446 1.27685354758807 -1.15517041187054 -1.11715315759746 0.250104656529871 -0.256800259329525 -0.390781160035615
AT1G29450 0.129877398068029 0.133574917013808 0.0477138726053258 0.0456426963975506 -0.0228424778810785 0.0919704950310533 -0.0880819425391618 0.047748154511764 -0.0193429291650133 0.0593658242823112 0.174625564230765 0.171181873499433 0.119521053495472 0.221597017463608 0.360529256002623 0.279521467988373 -0.0484625186714413 -0.0692553001255497 0.0472491975001865 -0.0539703673189048 0.00587651515507792 0.101119583542064 0.0217903706772547 -0.00587651515507789 -0.0800699728737639 0.296373157692913 -0.0556439796112629 0.112013559721530 0.146773321507747 -0.083414105057728 -0.0543167129388242 0.0260858676570067 0.264258029651980 -0.0177951194783417 0.0711856339094836 0.247884934120286 0.0792268910691267 0.283297424232047 1.01877752233022 0.285473010857336 0.283853235934582 0.350931856431129 -0.913423876886753 0.274494597556699 0.153956890111276 0.166943820964758 0.0121138972651343 0.481200615659301 -0.187482925451324 0.286634535948153 -2.25575327104952 -0.248591160325978 0.141245039294582 -2.96406264497946 0.204964201616808 0.287007198529576 -0.849998857151904 -0.0676142037415929 0.298589349215762 0.205133216224982 0.0706683085597298 -0.172595405313191 -0.089949579584412 0.105850731454660 -0.747881230645978 -1.38957087154215 1.55064934786067 -0.297621589908316 -0.818890339287122 0.302069536151749 -0.960979586033271 -0.409653727428665
AT1G29460 0.172011651563695 0.199047146608443 0.0996656915020474 0.116042264621999 0.191631899110989 0.0125126329093822 -0.0767503672238854 0.185728240381411 -0.0231598698881304 0.0147501838259617 0.0371338621574202 0.399551964079753 0.201548814506215 -0.0997178643875745 0.508603775742889 0.403968380446952 -0.33847447955682 0.223436733758388 0.123294667715358 0.337554358976136 0.322250127105904 -0.107619563363386 0.125208183087508 0.200939661960300 0.159377217291066 0.250848443045672 0.136188672701443 -0.138601369101618 -0.0736673060003778 -0.0197847074333755 -0.329931549237784 0.106340811593929 0.296978399601773 -0.442031153051201 0.410317487886917 0.350812172498820 0.110695470961950 -0.0265453687704296 1.48094760795781 -0.00634831651393416 0.509784728366835 0.234080502287758 -0.405178627642503 -0.0459241841745836 0.207479624626206 0.145005119773507 0.123483959357344 -0.0840982519041703 -0.135233007365178 0.261326462541808 -1.25234183047388 -0.0611582847789458 0.232243320204079 -3.23904332375764 0.169990189112149 -0.815131403136669 -0.417554473527657 0.21238100196024 0.190050236372675 0.702702200309626 0.00634831651393419 0.170008842510956 -0.0683669166556325 0.164209847583581 -1.01732337253482 -0.551729366762438 0.240297629291769 -1.09757424925036 -1.71989307052187 0.179347125555831 -0.503043968472499 -0.926477771346795
AT3G03840 0.170276181228097 0.167584536249729 0.072473794077087 0.114082845393306 0.163410857954956 0.00416353061692911 0.0534548542847599 0.173594462042438 0.019660304128521 0.00893916046227442 0.180359561251831 0.317127769752546 0.104914126193955 -0.0308330322516703 0.195193198974104 0.168348661705333 -0.124708732555711 0.125537021014688 0.0665034975642906 0.393026712130252 0.0588085662010629 -0.0387744807433914 0.0913529179202215 0.13974821304958 -0.210426567818463 0.00802212804134466 0.0880581621627605 0.0267533360966193 -0.126166888519981 -0.111466472527619 -0.0573993310580356 0.0235349536205269 0.179730006679194 -0.0469963129591258 0.115234338178867 0.0559021431412822 -0.68736100054255 -0.0107369871120659 1.79592441778592 -0.609822094231505 0.244285606703576 -0.316493547759816 0.0749749585219147 -0.0477653725164282 -0.442608738427243 0.140093416148293 0.0214687488392063 0.062632589487254 -0.00416353061692911 0.197483476330362 -0.86803162374345 -0.051198408097683 0.012698769808528 -2.93867068934533 0.210369049221684 -0.608339302201018 -0.752055974670958 0.0242435335295928 0.106564490709832 0.300881985039036 -0.0394868699679086 0.00532619450789031 -0.0692315411373153 0.0260232671610716 -0.595513410881251 -2.15426539872545 1.29533579917884 -0.888130742117917 -1.46149315881323 0.0853872937478442 -0.33173295974708 -1.50630410066092
AT5G18060 0.180156402880988 0.192329033848656 0.0165870629789589 0.0894051354513945 0.101325730399977 -0.312166219290617 0.0267127071853753 0.0183617065354440 0.118288631263923 0.339086923268048 0.328746608099469 0.152043202563288 0.391409292165816 -0.0807512700737032 0.179962375773019 0.607853940386728 0.0476128484806326 -0.00078712428734249 0.406031849594885 0.340285129588635 0.347177479422649 -0.0733030136055794 0.393995295509408 0.218934400919897 -0.841470019064724 0.262132970794769 -0.000565317394134124 0.301068233181602 -0.320936095283568 0.159062487751320 0.146465431043248 -0.0164408479474375 0.241679015145076 -0.513746758147322 0.757145212993912 0.612654458596038 -0.604097586695769 0.311551242261492 1.52906000305527 0.198606694932392 0.849805078923949 -0.0117196908457465 -0.49561102773792 -0.0437337281537060 -0.338047823191308 0.0818328398021037 -0.0517820267475128 0.250243230948989 0.0153436452689566 0.211124889872992 -1.77109525312369 -0.101542846584508 0.650279344333102 -3.70033833463438 0.870279238802591 -0.497400690622367 -0.894338615634293 -0.0313372301286365 0.161975389012459 0.362219383736568 -0.241176991945859 -0.627067266394702 0.206163881681365 0.0941174897525594 -0.528535860444075 -0.566157831476076 1.91262908710996 -0.0680576667204226 -0.919415157611131 -0.0272436612260875 -0.321060828393104 -0.660249641245931
AT1G29430 0.100842359491250 0.156939869430946 0.162572394723672 0.196274594637436 0.228312503531807 -0.139612942118781 0.116190778634464 0.223583990906503 0.0724879038061728 0.143842463453813 0.187895983893825 0.292935689685212 0.0565277061370854 -0.0422506533872554 0.351273327535578 0.549621562893376 5.18266700946008e-06 -0.0173248685279592 0.0909414911953217 -0.142836679439717 0.297515152952760 0.112804032458295 0.0452928710837954 0.228935510443791 0.04014083502108 -0.0122378426697341 0.177099218755356 0.000302834615896199 -0.166580735228077 -0.149927042543760 -0.0612756866397762 0.363318328138673 0.175547329167247 0.195503343070153 0.298233433500353 0.191032808995043 0.311527920166262 0.333717943105967 -0.00369633106126277 0.240216159541897 0.416767094627089 0.207452281011205 -0.349382888128404 -5.18266700946008e-06 0.0111797434161951 -0.0736864706663811 0.100711970695755 0.0247425635156367 -0.152205359856385 0.393026411796102 -1.18654834250239 -0.0845798201300651 -0.103143009038814 -3.32246388601332 0.0326559891810363 -0.186583481093969 -0.480242923129297 -0.0645738214896347 0.412827128575646 0.560274228813442 0.133285111230299 -0.0380883726062702 0.151579748982989 0.174283302723254 -0.372068619102689 -1.00053182915488 0.146967060387079 -1.06328131092535 -1.14080453236071 0.129255872846956 -0.475616700030279 -0.172910143298538
AT1G29510 0.194231219209493 0.174530803144889 0.0758556446523636 0.190118219157508 0.163930537027046 -0.572220156426552 -0.0298524425815606 0.187159160965006 0.175445395547150 0.123007092328392 0.365748360257606 0.0622443975254948 0.177360782186031 -0.509467047873412 0.597611567124349 1.08644980252350 -0.288920005128484 0.303775881696566 0.717814754412859 0.812375054276007 0.159408499824838 -0.0784070495841807 -0.091924677482502 0.157692326674974 0.181138093347679 -0.326564856932323 0.206412517276488 -0.234701242914884 -0.53716041239223 0.0709353718273597 -0.214106389123445 0.409409698782390 -0.0412476522747286 0.203446977321762 0.338667057624612 0.205419806477147 0.00537344537362169 0.0152294611959709 1.14969952126422 -0.202853060352762 0.578767228933286 0.577542458148347 -0.207060400651374 -0.434049181716536 0.375671129456009 0.221129485800143 0.364939462550884 -0.0542013531158113 -0.0120840113725917 0.0738026894557194 -1.86541453782505 -0.0694915828149038 0.086121035932537 -3.73318219532438 0.753808124880935 -0.222526350490903 -0.633499782074627 0.10074507875823 0.119479470150073 0.63799367525593 0.16172642705076 -0.0554030587227301 0.0744733250740934 -0.136374213517573 -0.70798044208043 -0.550411334434811 0.178297280005562 -0.00537344537362172 -1.05660394108202 0.175402364934518 -0.278348332346330 -1.0927559566715
[+] Show/hide bicluster #400 motif PSSM #1.
bicluster 400 motif PSSM #1
Arabidopsis thaliana
12x4
POSITION A C G T
1 0 0.142857 0.714286 0.142857
2 0.428571 0 0 0.571429
3 0 0.857143 0.142857 0
4 0 0 0 1
5 0 0 0 1
6 0 1 0 0
7 0 0 0 1
8 0.142857 0.857143 0 0
9 1 0 0 0
10 0 1 0 0
11 0 1 0 0
12 1 0 0 0
[+] Show/hide bicluster #400 motif PSSM #2.
bicluster 400 motif PSSM #2
Arabidopsis thaliana
12x4
POSITION A C G T
1 0 1 0 0
2 1 0 0 0
3 0 0 0.285714 0.714286
4 0.714286 0 0.285714 0
5 1 0 0 0
6 0 0.428571 0.428571 0.142857
7 0 1 0 0
8 1 0 0 0
9 0 0 0 1
10 0 0 1 0
11 0 0 0 1
12 0 0 1 0
|