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[+] Show/hide bicluster #132 rows and columns.
bicluster 132
Methanococcus maripaludis S2
8x38
[+] Show/hide bicluster #132 rows (genes).
bicluster 132 genes
Methanococcus maripaludis S2
8
[+] Show/hide bicluster #132 rows (short gene names).
bicluster 132 short names
Methanococcus maripaludis S2
8
short_name
[+] Show/hide bicluster #132 rows (long gene names).
bicluster 132 long names
Methanococcus maripaludis S2
8
long_name
[+] Show/hide bicluster #132 rows (NCBI RefSeq gene IDs).
bicluster 132 NCBI RefSeq IDs
Methanococcus maripaludis S2
0
[+] Show/hide bicluster #132 gene upstream sequences.
bicluster 132 upstream sequences
Methanococcus maripaludis S2
8
upstream
[+] Show/hide bicluster #132 columns (arrays; conditions).
bicluster 132 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #132 ratios.
bicluster 132 ratios
Methanococcus maripaludis S2
8x38
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_minus30m
RNA_36 -0.449562363096588 0.145884475441939 -0.672140135300149 -0.968256771047958 -0.615587589673358 -1.04398877843344 -1.08198921913616 -0.78390086240849 -1.11344713411021 -0.684777071330185 0.37215427408658 -1.36059602606053 -1.99772414329676 0.0267951077342337 0.116112133515013 0.223292564451948 0.616287477887376 0.401926616013506 0.634150883043532 -1.01523685970819 -1.53327560923671 -0.61033300950199 -1.60472922986133 0.16970234898348 -0.461471299867359 0.568651730804294 1.98581520652599 1.93817945944291 1.36059602606053 -0.116112133515013 -0.586515135960449 1.71190966079827 1.83099902850597 1.14623516418666 0.05656744966116 -0.604378541116605 -0.395972147628121 0.390017679242735
RNA_37 -0.373154820131173 0.152506752575349 -1.11665596742423 -0.682473032797256 -0.961444114968192 -1.02210274129557 -0.899222625399013 -0.951187821699081 -0.672802813243819 -0.803008853831123 0.56784429150396 -1.45043656172726 -1.94364988920498 -0.158996401621109 -0.0876102621177537 0.0681413149804752 0.451030608680288 0.340706574902376 0.366665171085414 -1.02211972470713 -1.30766428272055 -0.574333940549719 -1.4114986674527 0.392623767268452 -0.223892892078704 0.204423944941425 2.06046357202865 2.27462199053872 1.38554007126966 0.236872190170223 0.178465348758387 1.91120164397618 2.06046357202865 0.833919902380101 -0.120058507346551 -0.626251132915795 -0.340706574902376 0.41858236345149
RNA_38 -0.134904429610683 0.337261074026708 -1.01003448048716 -0.973023750692426 -1.01751046699886 -1.00449671497184 -0.957794892459278 -0.970254867934765 -0.947919213689627 -1.01012677964509 0.263676839693609 -1.16508371027408 -2.02969846368801 0.0429241366943084 0.355657132609983 0.134904429610683 0.62546599183135 0.171696546777233 0.741974362858759 -0.797162538608584 -1.53300488193958 -0.459901464581875 -1.52074084288407 0.2207527029993 -0.343393093554467 0.686786187108934 1.91932211218836 1.77828566304992 1.05470735877443 -0.0306600976387917 -0.533485698914975 1.73536152635561 1.77828566304992 0.558013777026009 -0.11037635149965 -0.723578304275484 -0.5886738746648 0.159432507721717
RNA_39 -0.134938768559139 0.386415564510262 -0.87101536166965 -0.820793507306808 -0.998970300659046 -0.956872569796076 -0.951887312193882 -0.968043242675189 -0.956687930625624 -0.947363655584607 0.368014823343107 -1.15311311314173 -1.93821140294036 0.0613358038905178 0.355747662565003 0.17174025089345 0.650159521239488 0.226942474394916 0.778964709409576 -0.65629310162854 -1.48432645415053 -0.386415564510262 -1.44752497181622 0.233076054783968 -0.325079760619744 0.717628905519058 1.96887930488562 1.97501288527467 1.06724298769501 -0.0122671607781036 -0.545888654625608 1.91367708138415 1.895276340217 0.693094583962851 -0.0184007411671553 -0.650159521239488 -0.564289395792763 0.20854173322776
RNA_40 -0.119374236547013 0.37006013329574 -1.03262501760821 -1.00315813193745 -1.00513456939098 -0.973242058920709 -0.957520394374213 -1.01843060316924 -0.941619059664291 -0.958778127299184 0.179061354820519 -1.16986751816073 -2.04129944495392 0 0.274560744058129 0.113405524719662 0.626714741871817 0.173092642993169 0.668495724663272 -0.805776096692336 -1.49814666866501 -0.417809827914545 -1.55783378693852 0.155186507511117 -0.417809827914545 0.626714741871817 1.85626937830605 1.76076998906844 1.65333317617613 0 -0.519277928979506 1.68914544714023 1.72495771810433 0.584933759080363 -0.119374236547013 -0.728182842936778 -0.590902470907713 0.143249083856415
RNA_41 -0.184752883732894 0.387981055839076 -0.93678865942123 -0.937622898750867 -1.03263383667976 -0.953010036514132 -1.03569272859143 -0.979798484119155 -0.989067844217507 -0.974978416868012 0.320238331803682 -1.12699259077065 -2.0199648621463 0.0431090062043419 0.264812466683814 0.110851730239736 0.603526086860785 0.160119165901841 0.708219387642759 -0.788278970593679 -1.52729050552525 -0.400297914754603 -1.48418149932091 0.209386601563946 -0.387981055839076 0.665110381438417 1.9029547024488 1.9029547024488 1.00998243107315 -0.0431090062043419 -0.566575510114207 1.81057826058236 1.86600412570222 0.615842945776312 -0.0739011534931575 -0.739011534931574 -0.597367657403022 0.123168589155262
RNA_42 -0.106119213286743 0.337084559852008 -1.0023624875131 -1.01871084521596 -1.06822569559716 -1.01908666953097 -0.976430609777526 -1.05619931751689 -0.987047643555358 -0.961961373649705 0.249692266557043 -1.20476518613773 -2.04747658576775 0.0249692266557043 0.305873026532377 0.0998769066228171 0.642957586384385 0.1435730532703 0.749076799671129 -0.848953706293946 -1.58554589263722 -0.461930693130529 -1.58554589263722 0.218480733237413 -0.411992239819121 0.655442199712238 1.82899585253034 1.7228766392436 0.992526759564246 -0.0561807599753347 -0.549322986425494 1.67918049259611 1.67918049259611 0.486899919786234 -0.162299973262078 -0.799015252982537 -0.686653733031868 0.0998769066228171
RNA_44 -0.173433405496668 0.340672760797026 -0.946839156420757 -0.891460686982083 -1.01499009803698 -1.00305669048117 -0.976020063987545 -0.991496201911484 -0.906470679270399 -0.879713738919335 0.334478710600716 -1.13970523612096 -1.77769240634084 0.148657204711429 0.340672760797026 0.167239355300358 0.644181220416194 0.272538208637621 0.792838425127624 -0.867167027483339 -1.51754229809584 -0.334478710600716 -1.46179584632906 0.222985807067144 -0.328284660404407 0.70612172237929 1.93254366124858 1.85821505889287 1.1025409349431 -0.111492903533572 -0.637987170219885 1.80866265732239 1.86440910908918 0.70612172237929 -0.0185821505889287 -0.668957421201433 -0.600822869042027 0.14246315451512
[+] Show/hide bicluster #132 motif PSSM #1. bicluster 132 motif PSSM #1 Methanococcus maripaludis S2 24x4
POSITION A C G T
1 0 0.8 0.2 0
2 0 0.6 0.4 0
3 0.4 0 0.6 0
4 0.6 0 0.4 0
5 0 0 0.8 0.2
6 0 0 0.2 0.8
7 0.4 0 0.6 0
8 0.6 0 0 0.4
9 0 0 0 1
10 0.4 0.4 0 0.2
11 0 0.6 0 0.4
12 0.2 0.2 0.6 0
13 0.2 0 0.8 0
14 0.6 0.4 0 0
15 0 1 0 0
16 0 0.6 0.4 0
17 0 0.4 0.6 0
18 0.8 0 0 0.2
19 0 0.2 0.8 0
20 0 0 1 0
21 0.6 0.2 0 0.2
22 0 0.8 0 0.2
23 0.2 0.8 0 0
24 0.072113 0.227887 0.627887 0.072113 [+] Show/hide bicluster #132 motif PSSM #2. bicluster 132 motif PSSM #2 Methanococcus maripaludis S2 24x4
POSITION A C G T
1 0.2 0 0.8 0
2 0 0.6 0 0.4
3 0 0 0.6 0.4
4 0.6 0.4 0 0
5 0.6 0 0.2 0.2
6 0 0.2 0.8 0
7 0 0 0.8 0.2
8 0.2 0 0 0.8
9 0 0.8 0.2 0
10 0 0.4 0.6 0
11 0.4 0 0.2 0.4
12 0.4 0 0.6 0
13 0.2 0.6 0 0.2
14 0.4 0.2 0.2 0.2
15 0 0 0 1
16 0.8 0 0.2 0
17 0.8 0 0.2 0
18 0 0 1 0
19 0 1 0 0
20 0 0.6 0 0.4
21 0.2 0.2 0 0.6
22 0.4 0.6 0 0
23 0 0.6 0.4 0
24 0.2 0.2 0.6 0 |