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[+] Show/hide bicluster #289 rows and columns.
bicluster 289
Desulfovibrio vulgaris Hildenborough
26x365
[+] Show/hide bicluster #289 rows (genes).
bicluster 289 genes
Desulfovibrio vulgaris Hildenborough
26
[+] Show/hide bicluster #289 rows (short gene names).
bicluster 289 short names
Desulfovibrio vulgaris Hildenborough
26
short_name
[+] Show/hide bicluster #289 rows (long gene names).
bicluster 289 long names
Desulfovibrio vulgaris Hildenborough
26
long_name
[+] Show/hide bicluster #289 rows (NCBI RefSeq gene IDs).
bicluster 289 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #289 gene upstream sequences.
bicluster 289 upstream sequences
Desulfovibrio vulgaris Hildenborough
26
upstream
[+] Show/hide bicluster #289 columns (arrays; conditions).
bicluster 289 arrays
Desulfovibrio vulgaris Hildenborough
365
[+] Show/hide bicluster #289 ratios.
bicluster 289 ratios
Desulfovibrio vulgaris Hildenborough
26x365
GENES X111.1 X111.10 X111.12 X111.2 X111.6 X116.1 X116.12 X116.2 X116.6 X116.8 X121.15 X121.16 X123.5 X1258.1 X1258.10 X1258.100 X1258.101 X1258.102 X1258.103 X1258.106 X1258.11 X1258.110 X1258.111 X1258.112 X1258.113 X1258.114 X1258.117 X1258.118 X1258.119 X1258.13 X1258.14 X1258.15 X1258.16 X1258.17 X1258.2 X1258.20 X1258.21 X1258.23 X1258.25 X1258.3 X1258.30 X1258.31 X1258.32 X1258.33 X1258.34 X1258.35 X1258.36 X1258.38 X1258.4 X1258.40 X1258.42 X1258.45 X1258.46 X1258.47 X1258.49 X1258.5 X1258.50 X1258.53 X1258.59 X1258.60 X1258.61 X1258.67 X1258.69 X1258.7 X1258.71 X1258.72 X1258.74 X1258.75 X1258.76 X1258.78 X1258.79 X1258.8 X1258.80 X1258.85 X1258.86 X1258.87 X1258.88 X1258.89 X1258.90 X1258.91 X1258.92 X1258.94 X1258.95 X126.12 X1271.10 X1271.3 X1271.4 X1271.5 X1271.7 X1305.1 X1305.2 X1305.3 X1305.4 X1310.1 X1310.2 X1310.3 X1311.1 X14.1 X14.10 X14.11 X14.12 X14.13 X14.2 X14.3 X14.4 X14.5 X14.6 X14.7 X14.8 X14.9 X1413.10 X1413.15 X1413.16 X1413.17 X1413.3 X1413.4 X1413.6 X1413.7 X1413.8 X1413.9 X1414.1 X1414.10 X1414.11 X1414.2 X1414.5 X1414.7 X1414.9 X1415.1 X1415.2 X1415.3 X1416.3 X1416.4 X1416.5 X1416.7 X1417.12 X1417.4 X1417.5 X1417.6 X1417.7 X15.1 X15.2 X16.1 X16.10 X16.11 X16.14 X16.2 X16.3 X16.6 X16.7 X16.8 X17.1 X1709.10 X1709.12 X1709.13 X1709.14 X1709.15 X1709.5 X1713.1 X1713.3 X1713.4 X1715.4 X1715.5 X1718.2 X1721.11 X1721.2 X1721.6 X1736.10 X1736.17 X1736.19 X1736.21 X1736.5 X1754.1 X1755.1 X1755.102 X1755.103 X1755.104 X1755.105 X1755.106 X1755.107 X1755.108 X1755.11 X1755.110 X1755.111 X1755.113 X1755.114 X1755.115 X1755.118 X1755.119 X1755.12 X1755.122 X1755.124 X1755.125 X1755.126 X1755.129 X1755.13 X1755.130 X1755.131 X1755.132 X1755.133 X1755.134 X1755.135 X1755.14 X1755.15 X1755.17 X1755.2 X1755.20 X1755.21 X1755.23 X1755.24 X1755.31 X1755.35 X1755.36 X1755.40 X1755.41 X1755.42 X1755.43 X1755.44 X1755.45 X1755.47 X1755.50 X1755.53 X1755.54 X1755.56 X1755.59 X1755.60 X1755.62 X1755.68 X1755.69 X1755.70 X1755.72 X1755.75 X1755.76 X1755.77 X1755.78 X1755.79 X1755.8 X1755.80 X1755.81 X1755.82 X1755.83 X1755.86 X1755.87 X1755.88 X1755.89 X1755.92 X1755.93 X1755.96 X1755.98 X177.4 X177.6 X177.8 X178.1 X194.2 X195.1 X20.1 X20.2 X20.3 X23.1 X23.3 X23.4 X23.5 X23.7 X23.8 X23.9 X24.1 X24.10 X24.2 X24.3 X24.4 X24.6 X24.7 X24.8 X24.9 X26.1 X27.1 X27.11 X27.12 X27.13 X27.14 X27.15 X27.16 X27.2 X27.4 X27.5 X27.6 X27.7 X27.8 X28.3 X3.1 X3.5 X3.6 X30.1 X30.2 X30.3 X30.4 X31.1 X31.3 X32.2 X33.1 X33.2 X33.3 X33.4 X33.5 X37.1 X38.5 X388.1 X41.3 X41.4 X41.7 X42.2 X426.1 X435.5 X435.7 X440.1 X450.1 X450.4 X450.5 X56.3 X57.1 X57.2 X57.4 X59.8 X59.9 X6.10 X6.11 X6.12 X6.14 X6.15 X6.16 X6.4 X6.6 X60.1 X60.2 X60.3 X65.1 X65.2 X71.1 X71.3 X71.4 X71.5 X71.6 X71.7 X71.8 X71.9 X72.1 X72.2 X72.3 X72.4 X72.5 X72.6 X72.7 X72.8 X72.9 X73.2 X73.4 X74.2 X74.4 X75.2 X75.3 X86.1 X86.10 X86.3 X86.4 X86.6 X86.9
DVU0093 -0.105352105716586 0.825155378262145 0.0463777231508101 0.88738816881805 0.321108781348115 -0.103355363372821 0.122215913133629 0.890527211708873 0.671834796514921 0.375704427442553 1.45312072341318 1.77865292599577 0.0245068769299764 -0.791738087998548 -0.61987826709393 -1.81206404433075 0.0483823655631948 -1.50219619655923 -1.43637628109545 1.50068160527844 1.15959614259977 0.661999211082728 1.18980156121495 1.14874589210416 -1.87557318972312 -0.905018900084118 0.403244807284128 -0.411953398552215 0.394197994328236 -0.284556521666579 -0.450242809260198 0.375498285026994 0.0336536751293430 1.00335623862022 -0.507998482802731 0.263645657221676 1.16254632447514 1.53756505064917 1.67805048965995 0.574486200942067 0.773711118915748 -0.804518917763223 -0.623748066332124 0.00996951628302085 0.988712720801183 -0.775941653915242 -1.66627074671575 1.37809475923538 0.153992704772805 -0.430163056721859 0.541974949798353 -0.956010139870573 -0.093331287240892 0.287438442011526 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-0.0193459102266630 1.72698153967654 NA 0.0925030144214891 0.472640738184288 0.983544347783538 0.386647256867301 1.76290216418417 0.307835431680397 1.57379427158728 0.52528852360955 0.158775949445213 0.388439584935517 0.142072241856302 -0.476861102967505 0.419584371085074 0.793042833706609 1.46545223677508 1.24790409714534 -2.02111961019374 -1.13098184718013 1.31528921370451 1.85245684830887 2.2460037041688 1.47873422714285 -0.0178288501744334 -1.50525747314957 -2.07667931153699 1.01835772829862 0.217921541310618 NA NA 0.245216278393532 -0.264553671358714 0.223513308630879 0.261733593738434 -0.230535852441407 0.424370084528926 -0.216105204440111 -0.0377666483547532 -0.398298623696427 0.80585946065722 0.147905948778057 -0.399946528635179 -0.935274928513898 -0.906334755263676 -0.262816273455123 0.179570411316540 0.567097168010703 0.105444314330013 0.106430588521820 NA NA -0.183669559421864 -0.394727545802936 0.73622529331273 -0.367780905493601 -0.650719394355897 -0.577747448019358 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DVU0094 -0.446962596296963 0.4232897903435 -0.163590353578142 0.0175781250929568 -0.497268667390361 -0.447762305366168 -0.0204353225841514 0.0159549637458453 -0.200099376032967 -0.51303841048325 0.63019590724719 1.67299172715298 -0.0450175962000003 -0.587095959057452 -0.551971366483140 -0.464712121369154 0.178926103891081 -0.409751908868566 -0.0663071037516499 0.680082633112276 0.16527080575222 -0.0596930254351177 0.788371746112607 0.317331291809256 -1.11079790525774 -0.792452270497632 -0.065409823088477 -0.836221281046008 -0.495448354723234 -0.0838721169233834 -0.93225015707547 -0.521772603773799 -0.375380956451053 0.0570751299562817 -0.918174332454132 0.365532367981940 0.401466119658771 0.387354857412505 0.739805662403166 -0.311091198561129 0.423844979800702 -1.22959781781167 -0.617703435707628 0.760165759178374 0.769750455467191 -0.110196247848531 -0.847804659380755 1.08250048925119 0.352451159366910 -0.82218443781209 0.307756045553753 0.235855467083493 0.354531347950174 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DVUA0084 -0.742512449424631 0.0218545741196106 -0.268743024714049 -0.666043911717517 -0.309776626774461 -0.890893545839813 -0.833659765918077 -0.879582185127636 -1.07669119762868 -0.449030356017934 NA NA NA NA -0.49542121410541 -1.22306191052613 -0.331584716553665 -0.986449940543836 -0.795878526768822 0.701180217579546 0.238086268349933 0.310968577717549 0.588842205529767 0.371829677108425 -0.99728875326513 -0.544382322351988 0.0966043726016279 -0.534121867280403 0.00544216057368674 -0.217141811387978 -0.673953954173585 -0.130141206242346 NA NA -0.266092646852146 NA NA NA NA NA NA -0.025687451964784 -0.507379760109447 0.849339421894662 NA -0.184253498500834 -0.980320171279504 0.532806232037093 -0.295215984985850 -0.127300473722376 0.0723564969999362 NA NA NA NA 0.240443871913137 NA NA 0.921888893112179 -0.302380223438917 0.490380667960061 NA 0.348901854046479 NA -0.0129954292966387 -0.565053215118351 -0.93070571407162 -0.36098336525597 NA -0.0522657801657694 -1.17555029187767 -0.123322852373039 -0.414916500189219 NA NA NA NA NA NA NA NA -0.432732586723711 0.347296218155722 NA 0.135130388475643 -0.0394084992469868 0.629429968833565 -0.270978382166569 -0.188615321912323 0.523109752719843 -0.0261542471975161 -0.0429417200292465 0.338286987981733 0.504564298634207 -0.0927003043743499 -0.628079817041355 1.41492697579009 -0.143447746754286 -1.88054053036153 -1.54494927457604 -2.37886293231139 -0.999399810050484 1.97102350601649 2.193696337546 1.05178411757971 0.285583505103018 0.370990390785489 0.889611810778458 -1.10507900454179 -0.588440231554045 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.375980600297026 1.80728562717588 0.0504261611100483 2.18317700835767 0.500643177588128 -0.366859396794763 -1.37670164425723 -0.49776443577324 0.296424372380795 NA -0.846416507115409 -0.149415000600884 1.22182948482034 0.607503742056641 -0.087195223008399 0.369675474636947 0.122957141319226 -0.00323464236149918 -0.00825700568198175 NA NA 0.429670578470620 -2.97944061037515 1.21914828861121 -0.477758192028835 -0.0577813911336911 -0.0725196287846146 -0.0743673941567872 -0.263259413463336 0.0137401032935743 2.73826680590784 -1.47504299027274 -0.990608362863597 -0.467396036411386 -0.45865492585831 -0.927838580500855 -1.34337673811764 -0.251878197830768 -0.469122891134587 0.0516301312085563 -1.82376286197882 -1.77325159086650 -2.74127642297064 -1.36965451552365 -1.77865507441441 0.243021313019926 -0.0785299255895128 0.0305218233671548 -0.0804001883551644 -1.11224940666431 0.222922614233826 -0.096069160638042 0.245520680980395 -0.487318043340025 -0.0408975390573855 -0.59813157448009 0.760310353134256 0.556446986198325 1.19943481916550 0.987949047680997 -0.9500606634112 0.228904455431448 2.51811080606889 1.09592626359753 1.79762921171003 0.792886373436122 1.82183188706912 3.06642056722814 1.57407292089322 -1.75594195250484 -1.93708192474880 -1.29733412735388 -1.28197631765022 -1.69613381331104 -2.14718087060789 -0.954671088157023 -1.31518822318329 0.283652222009848 0.302597287331251 -0.0433369139685776 0.00411604709231818 -0.836628600034705 1.46224341157275 0.481588193494933 1.49225020899376 0.313373436079842 1.41468042901224 1.3333610834509 -1.06950230449783 -0.983857090263431 -0.377940647180945 -0.305011083014241 -0.92443212585354 -1.11509496739201 0.403641402398951 -0.184588391207415 -0.322600141057461 -0.141212081118294 0.912936163241447 0.659824050151445 0.617124202784053 0.0968950923438444 -0.353259260161532 1.05730060173413 2.3800754288193 0.731749963476646 -0.291336982347654 NA NA -0.0246281226426155 NA -0.0705088343555876 3.52341556554065 -1.01570168845767 0.577016178418825 1.81922260033686 NA NA 1.36638807890059 1.62502592164918 NA 0.737355820838044 1.11086288922236 NA NA NA NA NA NA NA NA NA NA 0.824390942532575 -0.134078866468106 NA NA NA NA NA 1.07400414593357 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.00905047539536706 NA NA 0.919178933112295 0.515610621560194 0.644510413412146 NA 0.219927070882931 0.286670365482046 NA NA NA 1.70101369313949 -0.0289645722815505 2.34872289690252 -0.0762250214000739 0.98563767163864 -0.699777674597044 -0.256583132174767 -0.0751708284691106 -0.936691664382205 -0.679291691914069 -0.00647097973209609 0.945840912580449 0.459024026930319 1.16857538080443 NA NA NA NA NA NA NA NA -0.527671587204864 NA NA -0.317297330777172 -0.126401194350163 -0.243030250340623 1.34305859004639 1.42134746479664 1.01042589559512 0.498167437027203 1.26653663387074 1.74057417820224 1.37258256669410 9.38418673197183e-05 1.84159672042688 1.56697442824758 0.487286505898025 1.05358185450154 1.55753374121235 1.58635916865615 1.2120806143128 0.819369606490334 NA NA -0.106719570529929 0.3001359286657 NA NA -0.219440860091443 -0.729066404527557 0.162597754084778 0.186378218086793 0.519628306760932 0.236519669032335
[+] Show/hide bicluster #289 motif PSSM #1. bicluster 289 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 21x4
POSITION A C G T
1 0.8 0.2 0 0
2 0 0.6 0.1 0.3
3 0.8 0 0.2 0
4 0.1 0.3 0 0.6
5 0.1 0 0.7 0.2
6 0.1 0.5 0.4 0
7 0.5 0.2 0 0.3
8 0 0 0 1
9 0 0 0.6 0.4
10 0.5 0 0 0.5
11 0 0.7 0.2 0.1
12 1 0 0 0
13 0.1 0.4 0 0.5
14 1 0 0 0
15 0 0 0.2 0.8
16 0 0 1 0
17 0.1 0.8 0.1 0
18 0 0 0.4 0.6
19 0.2 0.3 0.2 0.3
20 0.1 0.7 0 0.2
21 0.1 0.5 0 0.4 [+] Show/hide bicluster #289 motif PSSM #2. bicluster 289 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 15x4
POSITION A C G T
1 0.011303 0.627586 0.238697 0.122414
2 0.066859 0.07203 0.738697 0.122414
3 0.388889 0.111111 0.444444 0.055556
4 0.111111 0.722222 0 0.166667
5 0.722222 0.111111 0.055556 0.111111
6 0 0 0.111111 0.888889
7 0 0.5 0.222222 0.277778
8 0.555556 0 0.222222 0.222222
9 0.666667 0.333333 0 0
10 0.166667 0.166667 0.555556 0.111111
11 0.5 0 0.333333 0.166667
12 0 0.333333 0.5 0.166667
13 0 0.944444 0.055556 0
14 0.944444 0 0 0.055556
15 0 0.055556 0.055556 0.888889 |