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[+] Show/hide bicluster #267 rows and columns.
bicluster 267
Desulfovibrio vulgaris Hildenborough
17x365
[+] Show/hide bicluster #267 rows (genes).
bicluster 267 genes
Desulfovibrio vulgaris Hildenborough
17
[+] Show/hide bicluster #267 rows (short gene names).
bicluster 267 short names
Desulfovibrio vulgaris Hildenborough
17
short_name
[+] Show/hide bicluster #267 rows (long gene names).
bicluster 267 long names
Desulfovibrio vulgaris Hildenborough
17
long_name
[+] Show/hide bicluster #267 rows (NCBI RefSeq gene IDs).
bicluster 267 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #267 gene upstream sequences.
bicluster 267 upstream sequences
Desulfovibrio vulgaris Hildenborough
17
upstream
[+] Show/hide bicluster #267 columns (arrays; conditions).
bicluster 267 arrays
Desulfovibrio vulgaris Hildenborough
365
[+] Show/hide bicluster #267 ratios.
bicluster 267 ratios
Desulfovibrio vulgaris Hildenborough
17x365
GENES X111.10 X111.11 X111.12 X111.2 X111.4 X111.5 X111.6 X111.7 X111.8 X111.9 X116.10 X116.11 X116.13 X116.2 X116.6 X116.7 X116.8 X116.9 X121.1 X121.11 X121.13 X121.14 X121.15 X121.5 X121.7 X123.1 X123.12 X123.14 X123.15 X123.2 X123.3 X123.4 X123.5 X123.6 X123.7 X123.8 X123.9 X1258.10 X1258.100 X1258.101 X1258.103 X1258.106 X1258.107 X1258.108 X1258.109 X1258.11 X1258.110 X1258.111 X1258.112 X1258.113 X1258.115 X1258.116 X1258.117 X1258.118 X1258.119 X1258.12 X1258.15 X1258.16 X1258.17 X1258.22 X1258.24 X1258.25 X1258.27 X1258.29 X1258.3 X1258.30 X1258.31 X1258.32 X1258.33 X1258.34 X1258.35 X1258.36 X1258.38 X1258.39 X1258.4 X1258.40 X1258.41 X1258.42 X1258.44 X1258.45 X1258.46 X1258.47 X1258.48 X1258.49 X1258.5 X1258.52 X1258.54 X1258.55 X1258.56 X1258.57 X1258.60 X1258.61 X1258.63 X1258.66 X1258.67 X1258.68 X1258.7 X1258.70 X1258.71 X1258.76 X1258.8 X1258.80 X1258.81 X1258.82 X1258.84 X1258.85 X1258.86 X1258.87 X1258.89 X1258.90 X1258.91 X1258.92 X1258.95 X1258.97 X1258.98 X1258.99 X126.1 X126.13 X126.2 X126.3 X126.6 X126.7 X126.8 X1271.1 X1271.10 X1271.3 X1271.4 X1271.5 X1271.9 X129.2 X129.3 X1305.1 X1305.3 X1310.1 X1310.2 X14.1 X14.12 X14.2 X14.5 X14.8 X14.9 X1413.1 X1413.10 X1413.12 X1413.13 X1413.14 X1413.15 X1413.4 X1413.7 X1413.9 X1414.1 X1414.10 X1414.2 X1414.3 X1414.4 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1415.2 X1415.3 X1415.4 X1416.1 X1416.2 X1416.3 X1416.4 X1416.5 X1416.6 X1416.7 X1416.8 X1417.1 X1417.10 X1417.11 X1417.13 X1417.14 X1417.4 X1417.5 X1417.7 X1417.9 X15.2 X16.12 X16.13 X16.14 X16.17 X16.3 X16.4 X16.6 X16.7 X16.8 X17.1 X1709.10 X1709.12 X1709.13 X1709.14 X1709.2 X1709.4 X1709.5 X1709.8 X1713.1 X1713.2 X1713.3 X1713.4 X1713.5 X1718.1 X1718.3 X1719.1 X1721.12 X1721.17 X1721.2 X1721.3 X1721.4 X1731.1 X1736.10 X1736.17 X1736.19 X1736.21 X1736.5 X175.5 X175.9 X1755.101 X1755.102 X1755.107 X1755.108 X1755.110 X1755.112 X1755.115 X1755.117 X1755.121 X1755.122 X1755.126 X1755.131 X1755.133 X1755.135 X1755.19 X1755.23 X1755.30 X1755.37 X1755.4 X1755.47 X1755.5 X1755.59 X1755.6 X1755.61 X1755.62 X1755.65 X1755.66 X1755.68 X1755.70 X1755.72 X1755.73 X1755.77 X1755.78 X1755.83 X1755.9 X1755.93 X1755.96 X177.4 X177.5 X177.8 X178.1 X178.2 X178.3 X178.4 X178.5 X19.1 X193.1 X194.1 X194.2 X22.1 X23.1 X23.2 X23.3 X23.4 X24.1 X24.10 X24.2 X24.3 X24.4 X24.6 X24.7 X24.8 X24.9 X25.1 X25.2 X25.3 X27.10 X27.11 X27.12 X27.13 X27.16 X27.9 X28.1 X28.2 X28.3 X3.1 X3.2 X3.3 X3.4 X3.5 X3.6 X30.1 X30.2 X31.1 X31.2 X31.3 X32.1 X32.2 X33.1 X33.5 X37.1 X37.2 X37.3 X38.3 X38.4 X38.6 X38.7 X380.1 X388.1 X41.4 X41.6 X41.7 X42.1 X426.1 X435.1 X435.3 X435.7 X450.2 X450.3 X56.1 X56.3 X56.4 X57.2 X57.4 X59.2 X59.3 X59.4 X59.5 X59.6 X59.7 X59.8 X59.9 X6.11 X6.15 X6.2 X6.4 X6.6 X6.8 X6.9 X60.1 X60.2 X60.3 X71.1 X71.2 X72.1 X72.7 X72.9 X73.1 X73.2 X73.4 X74.1 X74.2 X74.3 X74.4 X74.5
DVU0040 0.0816218451540057 -1.07263584111145 -0.0969425807431805 0.194049150985864 -0.543744254752843 -0.375423750519604 -0.446572177233705 -0.148870597143764 0.326356144754747 -0.375036460878403 0.0934078435150315 -1.02195179903840 0.408125159972409 0.196833210235182 0.547876967187006 -0.150426173651193 0.349378854111393 -0.368412701472035 -0.350356151857417 -0.5596341954604 -0.357010894435081 0.216140152119963 -0.106600920469632 -0.824551375460135 -0.409905807088468 0.29742007584788 -0.499668480500516 -1.04435705805279 0.635639012966794 -0.141470930604796 0.82953612510494 -0.351591052541932 0.521114146438192 -0.495718126160267 0.132877969354197 0.82619879493962 1.38386932126495 0.374242849076491 -0.724515567679775 -0.763726984038618 -1.37128262923429 0.0955386004667356 -0.115127931827044 0.499189126578893 -0.10858140904055 0.478421549475869 -0.316051141981674 0.176667591888767 0.667936755959285 -0.669119870486062 -0.637764901134437 -0.328734324460087 -0.38239496406122 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-0.716971165469181 0.642198592946905 1.15768331846897 -1.11237618446599 -1.06582396959364 0.29321521688627 -0.381757595965986 0.126964831112341 -0.122191430957449 -0.0538130900824113 -0.721640772000232 0.0260225442632045 1.55424799330571 0.24404271095574 1.72607180897907 1.12078900070634 0.0527858076287515 -0.245735719958704 0.225598871699921 0.226346893978355 0.203328610789037 -0.412070202911865 0.245470149919023 -0.00176427029694490 0.287144728395904 0.827522218970696 -0.979969601932224 -0.589818443553766 -0.788916302302324 -1.00060218093174 -0.226170511210334 -1.15687465769814 -1.23601010335564 -0.612931889340635 -0.901812339254219 0.165614124220527 0.486736104801536 -0.16213891894294 -0.283722415817886 NA 1.38517282754305 1.804572099625 1.96240922654184 -0.226446261434869 -0.491550889620945 -0.831821355296392 -0.260647920303503 -0.37633332790551 0.133342938232004 0.837618306645887 -0.379274516094973 0.192081719608563 0.916322200988902 -1.96508395945816 -1.04271052380677 -0.229358900845066 -1.30959734826747 2.28807776620219 0.431977775703057 2.07020189256454 1.32955582198293 1.86908127534708 0.46942093821436 0.735812031934323 0.526120141686171 0.113384021899807 -0.458104556206836 0.738259702466712 0.86045733005842 -0.708220632661705 -0.820373073502494 0.432148183145185 1.89449190197719 1.12217660416367 -0.225083444514574 0.0447016343125071 0.464268879444556 0.274091960945602 0.147976068726773 0.316087436553763 -0.0676007650773545 0.707714721736113 0.480023822048608 1.62094369568784 -0.34041719312237 -0.0672499470549364 -0.194210706093336 0.272456492117902 1.48562690813591 1.52116903177983 1.03643289068545 0.766739876138795 -0.256604616449366 -0.0241832504300498 0.334949548622079 0.112565623560858 -0.0851344515455146 -0.0871140548829672 -0.502122790283898 -0.0735511495172751 0.799632938636903 -0.904326402296529 -0.231607836464428 3.47132507799918 0.64075344931431 -0.74476970937275 -0.33344376649709 -0.65851477356815 -0.978798880673966 -0.259694745169416 -0.754350148554228 0.773896988708187 1.00056101757559 -1.33454101424447 0.0307412812515962 -0.269525484113294 -0.571828286449068 1.65327906110261 1.26494263132864 0.61484930502713 0.390621881273793 -0.881894586278173 0.107822321343796 -1.34233770799276 0.583031801189728 -0.713532033455317 -1.40968848313943 -0.376928647411127 -0.730158931022988 -1.12718835342917 0.872368146338096 0.672108418665935 -0.792494858587021 -0.199876200273189 -0.890003324823087 1.33137497675475 -0.262440518071347 -0.306519390640803 0.0159235795792498 0.306533554376253 0.514749317820513 -1.07480023693484 0.413941143841415 0.618257453869698 0.97769986332642 0.433022351192467 -1.03636118677474 -0.854113747043916 -1.24928196608867 0.629254266596139 0.93725797245039 -1.84707348615875 0.374025966877418 -0.0538130900824113 0.0260225442632045 1.55424799330571 0.24404271095574 1.72607180897907 0.0992835806429651 -3.09876704951609 -2.89850510876027 -0.253941391568102 -0.443026817203969 -0.103858245884830 -0.198423532156136 -1.03099003272220 -0.0822067631664022 2.70002115942010 -0.39639714440338 2.73852881517379 3.20382965553087 1.15863273136083 1.89569803257407 2.03840873264745 2.38264283116513 0.710620500586952 -0.135355516516051 -0.0695088636816231 -0.357077286945001 -0.531488197421582 -0.185584327279410 0.464085193500443 -0.456223435092431 -0.754766208283061 -0.904173699523712 -0.171887773791249 0.0330349211609712 -0.353177833529024 -0.340935054699747 -0.0678824906277824 0.152903942121413 -0.172068582726598 0.327880959399247 0.0301008148392331 -0.0587000302816022 -0.37642185125207 NA NA NA -0.123368791466699 -0.0782172372453002 -0.0631208419471456 -0.444850398143109 0.274417284244210 1.50679062721479 1.34541256643553 -0.263439946654012 -1.33492609080201 -0.96563324595680 -1.21871042835411 -0.248656769086824 -0.405127759457881 0.0444524410919401 0.473541699996737 0.461307773502117 0.611624842128674 -0.308920586416249 -1.09633354098561 -1.49400697073803 0.210160400059821 -0.162582863525939 -0.891366584360115 0.155274818650662 -0.299101134199058 0.598760186789812 0.0182798497563161 -0.169661854241993 -0.444095736613683 -0.681455598829227 -0.0360113859040382 -0.522009560088648 -0.372619773517309 -0.121846632522597 0.727344773835839 0.592399784339461 0.427551608375046 0.446030856969489 0.298747926046283 0.643528656228972 -0.308243382815063 -0.90994099555211 -0.0258623170059305 -0.358726034274685 0.851089346908687 -1.21339902756049 0.166976941140822 -0.887914173844267 0.026763263365547 -0.235055599504581 -0.539094565974768 0.590206618428432 -0.691354722058322 0.317899952074584 -0.566837782786736 1.05440091695351 1.99488622931112 2.93044743051632 NA
DVU0048 0.762666806733179 -0.251531343347623 0.118429486482842 0.7992571703236 0.228056311143546 -0.0395860715547318 0.0954772341083925 -0.0868540072217161 0.393415267677618 0.389178110755469 0.777786233078514 -0.204727657291765 0.417798986276465 0.80522636546916 0.305320001599820 -0.0876678539625456 0.41597189717494 0.395045918297707 -0.32151096817776 -0.416866009101732 0.496670092693732 0.507691770071486 1.45643894160385 -0.837214787989648 -0.724370385492698 0.222807390429917 -0.143075334281110 -1.20548835912150 -1.39918092630049 0.161090010373798 -0.177157199586016 -0.608955384803198 -0.211848024183372 -1.27071649616681 0.299004398809578 -0.742248399545075 -0.184811118740103 -0.803991337726199 -0.657137731040057 0.0983467145065676 -0.480368444648833 0.711261179607388 -0.613209439659234 -0.249418467939236 0.525476845487484 -0.139065665793914 0.157416188322605 0.289668290337046 0.485811057929641 -0.607557080774055 -0.357079006768021 -0.194083015063864 -0.345119494059543 0.145192434172970 -0.0262043653630772 -0.2525959131825 -0.500671312213985 -0.215635062391608 0.227129037021501 -0.567705415943455 -0.570392187431478 0.264511491262872 -0.322710721483732 -0.257058235073692 0.0341580116194838 0.366097645307652 0.122712056602312 0.474675319498151 0.266097784806508 0.194615299981303 0.349015946389697 -0.272498510938705 0.368245795153029 -0.291802288162793 -0.722513725006871 0.0081373056753402 0.155651621576461 -0.103272251010435 0.80940649186444 -0.19642781461485 -0.180890798078334 0.754012952341333 0.127307872171211 -0.72232573549238 -0.995461826599056 0.412431780025627 -0.493206649919431 -0.421316502439204 0.430502008075968 0.323069168906309 -0.240120591042123 0.600723345086005 -0.043502526814124 0.704041537354195 0.583413524060576 0.090133473740823 -0.220666422206443 0.129084267471075 0.895060006495577 -0.141634785417249 -0.887912814133924 0.140949785422307 -0.0537097449009443 0.338076646439642 -0.326529654542179 0.487652932723317 -0.0262434418351908 -0.548980392954995 0.00259879661972376 0.257669940280400 -0.329167844470277 -0.439238873568034 0.723349539061754 0.19424354543579 0.587891476540614 0.174189922395470 0.269289382069403 -0.83417315989 0.0825327830784797 0.193077587997592 0.016772572339911 0.0226361553986774 -0.884233289030044 -0.0482486157090796 0.00834620638301743 -0.0846304503463691 -0.0263063866389196 -0.0199521298249114 -0.0365129710532191 0.741962613238213 0.25382143583765 0.644467871435807 0.346255246440919 0.306606356816962 0.515965420950876 -0.585820001070249 -1.37467469768097 -0.211520837938486 -0.116833687851395 -0.205114197529429 0.191383570125426 0.968637835122762 2.25371937049894 2.49377564378021 1.54852845680417 1.33039514049947 NA -1.49128311495123 -0.92608524678451 1.49174083773539 0.88654978454177 0.331192850622452 0.941265294467664 0.89405669167104 1.08841672723856 -0.432380424651674 2.44320857662355 0.757846671091931 1.03010829411996 0.408881101667635 -0.429271204816478 -0.548198863512725 -0.21224068992207 0.356776322527272 -0.624898585425521 0.990039068390565 NA 1.70907361442220 -2.03989566100792 0.570763308304469 0.245296428191692 -0.195592634232488 1.07987059717525 0.853364354629566 -0.935501620443004 -0.42635208673751 -0.515036668259615 -1.05399415734166 0.164522191970408 -0.910378617236604 -0.159753595027515 -0.362741926861880 -0.587547814810188 -0.116954085630339 -0.466284016754073 -0.187600967624836 -0.0987621924560126 0.0312382598679951 0.146673326853986 0.196345225962978 0.118524326136783 0.355242835027032 -0.304401810117238 -0.856812166815021 -0.960873868174237 -0.230359499532336 -0.361041572264508 -0.369277202792652 -0.352679207232211 -0.210155696104596 -0.133462733365354 -0.107582702720819 -0.170086047926855 -0.148989822365711 -0.541338302354629 0.0499307543337223 0.105469827312431 1.94100831822906 -2.04053778249563 0.801565850540903 1.75701938958465 2.80252201831186 -1.5299434754428 0.467402871201561 0.114912181544277 0.412493035035967 0.108741689761289 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DVU3242 -0.746382899094395 -0.144088905688803 -0.98792487111736 -0.0890593748713425 0.0481577382491495 1.16353258429727 0.278165004022177 -0.115516286497622 -0.658892129544909 0.178910071953942 -0.785944480915113 -0.135997205848193 -0.834811118268433 0.0283731733870007 -0.431801373714936 -0.0412948823986763 -0.733839792926258 0.194488944941687 1.79965329257562 1.67988315857876 -0.0121869960772633 0.578343619791551 -1.22506188661143 1.31907374293731 1.75605660150139 -0.289861235408712 0.878635454114616 2.18429445897845 0.556933236498414 0.723106372120303 -0.50021708133873 1.69377130116473 0.0292940176236794 2.0670755163914 -0.542237770145595 0.204252913011912 -0.685401876496244 -0.117196902708596 0.601948933445559 0.858219884513235 0.641199541638808 0.287968221191015 -0.903347592349497 -0.310628839233033 0.556279588048444 0.253447129380576 0.611862350006655 -0.453229871976664 0.108691924955404 0.0929636034767885 -0.739917364888338 -0.236488499618529 -0.0642839852044669 0.369929396578281 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[+] Show/hide bicluster #267 motif PSSM #1. bicluster 267 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 21x4
POSITION A C G T
1 0.111111 0.888889 0 0
2 0 0.111111 0.777778 0.111111
3 0.555556 0.333333 0 0.111111
4 0.333333 0 0.666667 0
5 0 0 1 0
6 0 0.555556 0.222222 0.222222
7 0.111111 0.888889 0 0
8 0.111111 0.555556 0.111111 0.222222
9 0.555556 0 0 0.444444
10 0 0.444444 0.111111 0.444444
11 0.555556 0 0.333333 0.111111
12 0.222222 0 0.555556 0.222222
13 0.111111 0.222222 0.111111 0.555556
14 0 0.222222 0.555556 0.222222
15 0.555556 0.333333 0.111111 0
16 0.777778 0 0.222222 0
17 0 0.666667 0.111111 0.222222
18 0.111111 0 0.888889 0
19 0.444444 0.111111 0.444444 0
20 0.333333 0.555556 0.111111 0
21 1 0 0 0 [+] Show/hide bicluster #267 motif PSSM #2. bicluster 267 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 20x4
POSITION A C G T
1 0 0 0.111111 0.888889
2 0.111111 0.333333 0.333333 0.222222
3 0 0.111111 0.111111 0.777778
4 0.111111 0.111111 0.666667 0.111111
5 0 0.888889 0 0.111111
6 0.222222 0.666667 0 0.111111
7 0.111111 0.777778 0 0.111111
8 0 0.555556 0.333333 0.111111
9 0.222222 0.333333 0.333333 0.111111
10 0 1 0 0
11 0 0 0.333333 0.666667
12 0 0.111111 0.222222 0.666667
13 0 0.666667 0.333333 0
14 0.666667 0.222222 0.111111 0
15 0.888889 0 0.111111 0
16 0.111111 0.777778 0.111111 0
17 0 0.111111 0.888889 0
18 0.333333 0.111111 0.444444 0.111111
19 0 0.666667 0.333333 0
20 0.666667 0.222222 0.111111 0 |