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[+] Show/hide bicluster #262 rows and columns.
bicluster 262
Desulfovibrio vulgaris Hildenborough
26x359
[+] Show/hide bicluster #262 rows (genes).
bicluster 262 genes
Desulfovibrio vulgaris Hildenborough
26
[+] Show/hide bicluster #262 rows (short gene names).
bicluster 262 short names
Desulfovibrio vulgaris Hildenborough
26
short_name
[+] Show/hide bicluster #262 rows (long gene names).
bicluster 262 long names
Desulfovibrio vulgaris Hildenborough
26
long_name
[+] Show/hide bicluster #262 rows (NCBI RefSeq gene IDs).
bicluster 262 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #262 gene upstream sequences.
bicluster 262 upstream sequences
Desulfovibrio vulgaris Hildenborough
26
upstream
[+] Show/hide bicluster #262 columns (arrays; conditions).
bicluster 262 arrays
Desulfovibrio vulgaris Hildenborough
359
[+] Show/hide bicluster #262 ratios.
bicluster 262 ratios
Desulfovibrio vulgaris Hildenborough
26x359
GENES X111.10 X111.12 X111.13 X111.2 X111.3 X111.4 X115.1 X115.2 X116.10 X116.11 X116.13 X116.2 X116.3 X116.8 X121.10 X121.14 X121.16 X121.3 X121.5 X121.7 X121.9 X123.1 X123.10 X123.11 X123.13 X123.14 X123.3 X123.5 X123.6 X1258.101 X1258.105 X1258.106 X1258.111 X1258.112 X1258.113 X1258.114 X1258.116 X1258.117 X1258.119 X1258.12 X1258.13 X1258.17 X1258.25 X1258.26 X1258.27 X1258.3 X1258.30 X1258.32 X1258.35 X1258.37 X1258.39 X1258.40 X1258.41 X1258.43 X1258.44 X1258.45 X1258.47 X1258.48 X1258.49 X1258.5 X1258.51 X1258.52 X1258.53 X1258.54 X1258.55 X1258.56 X1258.57 X1258.65 X1258.66 X1258.67 X1258.69 X1258.7 X1258.71 X1258.75 X1258.76 X1258.77 X1258.78 X1258.79 X1258.8 X1258.80 X1258.85 X1258.86 X1258.87 X1258.88 X1258.89 X1258.9 X1258.91 X1258.92 X1258.93 X1258.94 X1258.95 X1258.99 X126.1 X126.10 X126.6 X126.7 X126.8 X126.9 X1271.1 X1271.2 X1271.4 X1271.5 X1271.9 X129.1 X129.2 X1305.2 X1305.3 X1305.4 X14.4 X1413.10 X1413.11 X1413.12 X1413.13 X1413.15 X1413.16 X1413.17 X1413.2 X1413.3 X1413.5 X1413.6 X1413.7 X1413.8 X1413.9 X1414.11 X1414.3 X1414.4 X1414.5 X1414.6 X1414.7 X1414.8 X1415.1 X1415.2 X1415.3 X1415.4 X1416.5 X1416.6 X1417.10 X1417.13 X1417.14 X1417.2 X1417.3 X1417.4 X1417.5 X1417.6 X1417.7 X1417.8 X1417.9 X15.2 X16.14 X16.18 X16.6 X1709.12 X1709.2 X1709.3 X1709.4 X1709.5 X1709.6 X1709.8 X1709.9 X1713.1 X1713.3 X1713.4 X1713.5 X1715.4 X1718.1 X1718.2 X1718.3 X1721.1 X1721.12 X1721.13 X1721.14 X1721.16 X1721.18 X1721.2 X1721.4 X1721.5 X1721.6 X1721.8 X1731.1 X1736.21 X175.1 X175.2 X175.3 X175.4 X175.5 X175.6 X175.7 X175.8 X175.9 X1755.10 X1755.101 X1755.102 X1755.104 X1755.105 X1755.106 X1755.110 X1755.111 X1755.112 X1755.114 X1755.115 X1755.116 X1755.12 X1755.122 X1755.123 X1755.124 X1755.125 X1755.126 X1755.128 X1755.129 X1755.13 X1755.131 X1755.132 X1755.134 X1755.135 X1755.136 X1755.14 X1755.15 X1755.2 X1755.22 X1755.24 X1755.29 X1755.31 X1755.34 X1755.38 X1755.43 X1755.49 X1755.56 X1755.61 X1755.68 X1755.7 X1755.72 X1755.74 X1755.76 X1755.79 X1755.82 X1755.84 X1755.89 X1755.9 X1755.92 X1755.93 X177.4 X177.8 X178.1 X178.4 X178.5 X19.1 X193.1 X194.1 X199.1 X20.1 X20.2 X23.2 X23.6 X24.10 X24.2 X24.3 X24.4 X24.5 X24.6 X24.7 X24.8 X24.9 X25.1 X25.2 X25.3 X26.1 X27.10 X27.11 X27.12 X27.13 X27.14 X27.15 X27.16 X27.3 X27.4 X27.5 X27.6 X27.7 X27.8 X27.9 X3.2 X3.3 X3.4 X3.5 X3.6 X30.1 X30.2 X32.1 X32.2 X37.1 X37.4 X38.1 X38.2 X38.3 X38.5 X386.1 X41.1 X41.3 X41.5 X42.1 X426.1 X435.1 X435.10 X435.11 X435.2 X435.3 X435.5 X435.6 X435.8 X435.9 X440.1 X449.1 X450.1 X451.1 X451.2 X451.3 X56.1 X56.3 X57.2 X57.3 X57.4 X59.1 X59.2 X59.6 X6.1 X6.10 X6.12 X6.13 X6.16 X6.2 X6.3 X6.5 X6.6 X6.7 X6.9 X60.1 X60.2 X60.3 X65.1 X65.2 X71.1 X71.2 X71.4 X71.5 X71.6 X72.1 X72.5 X72.7 X73.4 X74.1 X74.2 X74.3 X74.4 X74.5 X75.2 X75.3 X86.10 X86.4 X86.5
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DVU0096 -0.500747989980204 0.233976032912581 0.305993558875053 -0.586148290898753 0.685414043461422 -0.252877886629722 -0.0280919248210919 -1.64205436204581 -0.50274624922087 -0.734724326272224 0.301618827359302 -0.592108685617624 0.685121787934827 0.218776520747061 -2.24218945636443 0.0104008584464859 -2.22619124726153 -0.216127512608941 -0.544551935966395 -0.362990465414755 0.202619512732938 0.306469864594868 0.309883894552606 -0.104133981299799 0.204651477429319 -0.905064802626275 1.06328425911260 1.29442602017608 0.235334566042091 -0.732495498657634 -0.408747163725707 0.218345620816672 -0.728926745185816 -0.169608320640365 1.21215962886625 0.452185031855056 0.204597597240886 -0.478952199790888 0.0614747870648395 2.12198445489628 1.41213724265260 -0.366488430350719 0.753619809021139 1.78988509526323 1.12715776627808 -0.00347976216960212 -0.189711253557983 -1.40319361677990 -0.252695858966099 0.860282963580506 -1.65529181825043 -0.913872919016055 2.14651773889353 -1.92930412789164 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0.511793297336064 0.92588489902275 1.19447528864400 2.07597201130596 -2.01836408925207 -1.04504940100677 -0.752615176199899 -1.72923456889678 -1.3965771659767 -0.694920603796031 0.501488044016004 0.93961048576224 1.13035260213843 2.06523707503129 0.202214579888399 0.621864937140721 1.18113513179736 -0.857427839244465 0.741114090949349 0.835001957809067 -1.07431209498210 -2.01685092004314 -1.68074177830495 0.299127357647856 1.61287085746741 -0.200348385447990 0.985516613517673 0.392015961822432 0.675725195869886 1.05586756158793 -0.676931020427228 -0.482217548636661 0.360693359197589 0.513123744225424 0.782265155841627 1.35198906570297 1.35193482001435 1.96361205995233 1.18468251432961 0.713547288502519 1.00001877011533 -1.22072549112725 1.26502894428753 1.18872381813195 1.35133811743951 1.60637565001399 1.34786353833145 -1.84249385666705 0.163244762685975 0.109276012579566 0.0532002457256286 NA NA NA -0.526948828977991 -0.115858441390222 -0.182404768162704 -0.287589727933392 0.0489422446724255 -1.13674317251354 0.126471895872742 -0.543232528191444 -2.75150884615970 0.137622239920807 0.732187820134786 -0.360093373331067 -1.13941976899160 -1.76699242321394 -1.57329248928973 -1.42005555652318 -2.18331380820662 -0.317933053126796 -0.6294018045675 -0.980448495930444 -0.82430941882261 -0.0987125212313034 0.118646241529957 -0.0403847017886797 -1.39271144690332 -1.47783863505059 -1.12416245530760 -0.967946292221194 0.133371090954588 0.340331240710634 -0.843916380223221 -1.03761060407494 -0.627697347930272 -0.484297442539878 -0.269463102824912 0.857324058677023 -0.940066863305726 -0.807735933430465 -1.05613265170311 -1.66004276554129 0.210629799215418 -0.411631060076337 0.372808705495877 -0.539202644534078 -0.538289032936234 0.278169964104180 0.0673630812657734 0.249452582051315 0.150771109339157 0.0732271829576244 -0.208507079768552 0.999002377212728 0.205582095137329 -0.382942228385904 0.993162400577133 NA -0.422301758035534 NA NA -3.53151902300049 NA -2.72253022829057 NA 3.39542701113016 2.58643821642025 -2.18081565149376 -2.96473722798783 -1.15447580262045 -1.81627034877267 -3.19785093725029 -2.21893038534133 -0.345868155249007 -0.250885381989997 0.0474937420344057 -1.15913093921509 -1.90039399168043 -0.137384986408992 -0.281334343524401 -0.306752731198176 0.462753767303649 -0.944520719845217 NA 0.606905974744142 0.283574547712678 0.188291995648125 NA 1.05114104908721 1.02736573477143 NA -0.202191454094829 0.147370761173430 -2.78586920734737 2.75088830403222 0.762890879894841 -0.377687534180178 0.0115930887934895 0.245191440458244 0.232619288361034 0.438790020595817 0.726770388863193 -0.233197004944858 -1.06826512821886 -0.142973577103368 -0.239799276257405 -0.223504156898979 -0.498561203611223 -1.76823436397976 -2.59346831491385 -3.73559701366896 -1.50621341275426 -1.83244412909076 1.05324092824413 0.282990692800931 -1.29390292507834
[+] Show/hide bicluster #262 motif PSSM #1. bicluster 262 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 8x4
POSITION A C G T
1 0.071429 0 0 0.928571
2 0.142857 0.071429 0.214286 0.571429
3 0 0 1 0
4 0 0.071429 0.214286 0.714286
5 0.285714 0.142857 0.571429 0
6 0.928571 0 0 0.071429
7 1 0 0 0
8 0.928571 0 0 0.071429 [+] Show/hide bicluster #262 motif PSSM #2. bicluster 262 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 23x4
POSITION A C G T
1 1 0 0 0
2 0.75 0 0.25 0
3 0.75 0 0 0.25
4 0.25 0.25 0.25 0.25
5 0.25 0 0 0.75
6 0.25 0 0.75 0
7 0 0 0.25 0.75
8 0 0 1 0
9 0 1 0 0
10 0.25 0 0 0.75
11 0 0.25 0 0.75
12 0 0 0 1
13 0 0.5 0 0.5
14 0 0.75 0.25 0
15 0 1 0 0
16 0.25 0.25 0.5 0
17 0 0.75 0.25 0
18 0 0 0 1
19 0 0.5 0.25 0.25
20 0 1 0 0
21 0.5 0 0.25 0.25
22 0 0 0 1
23 0 0 0.25 0.75 |