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[+] Show/hide bicluster #246 rows and columns.
bicluster 246
Desulfovibrio vulgaris Hildenborough
17x364
[+] Show/hide bicluster #246 rows (genes).
bicluster 246 genes
Desulfovibrio vulgaris Hildenborough
17
[+] Show/hide bicluster #246 rows (short gene names).
bicluster 246 short names
Desulfovibrio vulgaris Hildenborough
17
short_name
[+] Show/hide bicluster #246 rows (long gene names).
bicluster 246 long names
Desulfovibrio vulgaris Hildenborough
17
long_name
[+] Show/hide bicluster #246 rows (NCBI RefSeq gene IDs).
bicluster 246 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #246 gene upstream sequences.
bicluster 246 upstream sequences
Desulfovibrio vulgaris Hildenborough
17
upstream
[+] Show/hide bicluster #246 columns (arrays; conditions).
bicluster 246 arrays
Desulfovibrio vulgaris Hildenborough
364
[+] Show/hide bicluster #246 ratios.
bicluster 246 ratios
Desulfovibrio vulgaris Hildenborough
17x364
GENES X111.1 X111.11 X111.3 X116.11 X116.2 X116.3 X116.5 X116.6 X121.1 X121.10 X121.12 X121.13 X121.16 X121.3 X121.5 X121.6 X121.9 X123.1 X123.10 X123.12 X123.13 X123.3 X123.5 X123.6 X123.7 X1258.10 X1258.100 X1258.102 X1258.103 X1258.105 X1258.106 X1258.109 X1258.112 X1258.113 X1258.115 X1258.118 X1258.119 X1258.12 X1258.120 X1258.13 X1258.17 X1258.18 X1258.19 X1258.2 X1258.20 X1258.23 X1258.24 X1258.26 X1258.28 X1258.29 X1258.30 X1258.31 X1258.32 X1258.33 X1258.36 X1258.4 X1258.44 X1258.46 X1258.48 X1258.49 X1258.5 X1258.52 X1258.53 X1258.54 X1258.56 X1258.58 X1258.59 X1258.6 X1258.62 X1258.63 X1258.64 X1258.66 X1258.67 X1258.68 X1258.69 X1258.7 X1258.70 X1258.72 X1258.73 X1258.74 X1258.77 X1258.78 X1258.81 X1258.83 X1258.87 X1258.88 X1258.89 X1258.93 X1258.94 X1258.95 X1258.97 X1258.99 X126.11 X126.12 X126.13 X126.14 X126.15 X126.4 X126.7 X126.8 X126.9 X127.1 X1271.1 X1271.10 X1271.4 X1271.5 X1271.7 X1271.9 X129.1 X129.2 X1305.1 X1305.2 X1305.3 X1305.4 X1310.1 X132.1 X132.2 X14.10 X14.11 X14.12 X1413.10 X1413.11 X1413.12 X1413.15 X1413.5 X1413.6 X1413.7 X1413.8 X1414.11 X1414.2 X1414.3 X1415.2 X1415.3 X1416.1 X1416.5 X1417.1 X1417.11 X1417.12 X1417.14 X1417.3 X1417.7 X1417.8 X15.2 X16.1 X16.10 X16.13 X16.14 X16.17 X16.18 X16.2 X16.9 X17.1 X1709.13 X1709.14 X1709.4 X1709.5 X1719.1 X1721.1 X1721.10 X1721.12 X1721.16 X1721.17 X1721.18 X1721.2 X1721.5 X1721.6 X1721.7 X1731.1 X1736.17 X1736.19 X1736.5 X175.7 X175.8 X1755.102 X1755.103 X1755.105 X1755.107 X1755.11 X1755.114 X1755.119 X1755.12 X1755.120 X1755.121 X1755.123 X1755.124 X1755.125 X1755.128 X1755.129 X1755.131 X1755.132 X1755.134 X1755.135 X1755.18 X1755.19 X1755.2 X1755.20 X1755.21 X1755.23 X1755.26 X1755.27 X1755.28 X1755.29 X1755.33 X1755.34 X1755.35 X1755.39 X1755.4 X1755.40 X1755.41 X1755.42 X1755.46 X1755.47 X1755.49 X1755.50 X1755.51 X1755.52 X1755.53 X1755.54 X1755.55 X1755.56 X1755.58 X1755.59 X1755.62 X1755.64 X1755.65 X1755.66 X1755.67 X1755.68 X1755.69 X1755.7 X1755.71 X1755.72 X1755.73 X1755.76 X1755.77 X1755.78 X1755.79 X1755.80 X1755.81 X1755.82 X1755.83 X1755.87 X1755.88 X1755.9 X1755.95 X1755.98 X1755.99 X177.1 X177.3 X177.8 X178.3 X179.1 X19.1 X193.1 X193.2 X193.3 X194.1 X194.2 X194.3 X195.1 X199.1 X20.1 X22.1 X22.2 X23.1 X23.2 X23.3 X23.4 X23.7 X23.8 X23.9 X24.2 X24.4 X24.8 X25.2 X25.3 X26.1 X27.12 X27.14 X27.15 X27.16 X27.4 X27.5 X27.8 X28.1 X28.2 X3.1 X3.3 X3.4 X30.3 X31.1 X31.3 X37.1 X37.2 X37.3 X37.4 X37.6 X37.7 X37.8 X37.9 X38.2 X38.3 X38.4 X38.5 X38.7 X388.1 X389.1 X41.4 X41.5 X41.6 X41.7 X42.2 X426.1 X435.1 X450.1 X450.3 X451.1 X451.3 X56.1 X56.2 X57.1 X57.4 X59.2 X59.3 X59.5 X59.6 X59.7 X59.8 X6.10 X6.11 X6.14 X6.15 X6.16 X6.2 X6.3 X6.4 X6.6 X6.9 X60.2 X60.3 X65.1 X65.4 X71.3 X71.6 X71.7 X72.2 X72.4 X72.7 X72.8 X72.9 X73.1 X74.2 X74.5 X75.1 X75.2 X75.3 X86.10 X86.2 X86.4 X86.5 X86.7 X86.8 X86.9 X88.1
DVU0252 0.346267182682641 -0.0809597135819364 0.265717226064534 -0.0812903690008094 0.244861837977030 0.264218359222340 0.8194054229231 0.186386892959345 -0.168243436053424 -3.08948097664181 -2.12951896327557 -4.06347474982499 -3.09099463207154 -0.303166679441422 -0.366490541335712 -3.83760082319946 -0.840818827914025 0.224595383640056 -0.613151132612574 -1.2820981010264 -3.29570348018831 -0.424788023303015 -0.236989490070406 -2.79353524262291 0.081645503881632 0.205973942186769 1.68380532349262 1.75278973474394 1.58593097153945 0.828794436171971 -2.20277466657285 0.186410380716013 -2.15686045187115 2.62274144505628 -0.108955118721489 0.295120417745424 -0.591626778418484 0.238052128377089 -0.905719849172738 0.156511336394351 -0.173285474484857 -1.31572908890756 -1.21703701505558 0.687983595112486 -0.416481186694707 -1.58829145628793 0.0880079891962729 0.0742504271905055 0.277992623632849 -0.634966908972732 -0.640918880495829 1.85338692663678 1.70016846063811 -0.898821408047606 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DVU0472 0.283894480957198 -0.663371792175985 0.523102759609169 -0.67286844721076 0.11432576094953 0.526613513981753 0.48178228357362 0.188973766651842 0.417380495436958 -1.39667685176172 -2.03209331329668 -2.37529784264923 -1.37287075724015 -0.346121205644341 0.298150922519961 -1.95945750985573 -0.271777293435828 0.0969342988098754 -0.784414753520437 -1.06308356754994 -1.76721828327697 -0.642853001320305 -0.231554017665231 -1.98208905579080 -0.290223435749227 0.512210253845677 1.96524645877324 1.56520523684453 1.49582808954297 0.669851862670303 -2.54235589343443 -0.0187773793385570 -2.11263583405165 2.82293191654068 0.0679722726019985 0.378384049988728 -0.594664280806362 0.100284175835517 -0.882869140219578 0.11059298824657 -0.1829047881628 -1.49044736787809 -1.63647813421224 0.539211263760162 -0.26247186064044 -1.49740155493599 0.374215834882967 -0.048413245502887 0.233790673296725 -0.690128581927057 -0.485580229399368 2.05229196804372 2.12302271097241 -0.56142383962016 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DVU2726 -0.479787120422502 -0.498901686063395 0.423817915903162 -0.486937343434943 0.192957288824779 0.426728948172858 -0.235955418722397 0.234253920360759 0.406483931667232 NA -1.89443963978482 -0.59525928005057 NA -0.80894724259797 0.00148923559197217 -3.36426834995902 -0.135736825601515 -0.110877095190353 -0.362466455303176 -1.17356495074845 -2.20878260770754 -0.358044112113462 -0.314582400326896 -1.4093039827388 -0.130455849185252 0.390364090473789 1.88537808150130 1.64387156682662 1.40720464330030 0.878505388338274 -2.64588623230357 0.175094467059855 -2.14275069238992 2.96608668232496 -0.113999177299602 0.574683376210289 -0.414032966100623 0.0852293240851816 -1.09167276128144 -0.0520355508719013 -0.0343713706714803 -0.869405744049226 -0.8716872655906 0.434928355732503 -0.513830429886488 -1.67910815693516 0.213471575815352 -0.167372711378462 0.379902568254567 -0.673773459154618 -0.365736514886135 1.12297023955704 1.10228007770017 -0.84242047490914 2.00844197070272 -0.577811280384077 0.734405652197967 -1.34949439889766 1.45158575611205 0.218320870404621 -0.644652220086643 0.0841791691938886 0.410743742221888 -0.547027114132038 0.243412755639291 0.421822645868307 -0.986919265056419 -0.314189410970487 0.702306669704115 0.583993827752867 1.33641804194219 0.271118505266126 -0.704741990783738 0.493064096018564 -0.774320513749931 -1.32148784260296 1.02297385523274 0.735989738924726 0.603912566058265 1.27218126319089 -0.181766553021999 1.06638098516425 -0.497756680037315 0.934557314691278 1.68665161189003 -0.811428897607885 -1.49727780378925 -1.39334182245996 0.453827019813394 -2.05710569715523 0.0894749433575225 -0.3364721500649 2.02633268986023 0.588820076670002 1.18282470181233 -0.349283117911789 -1.57671259684859 1.03646527687267 NA NA NA -0.0374086083193692 0.00271380983342444 -0.0561908068508704 0.109758773626744 -0.00948753933898542 -0.0680565382611865 -0.0972675341574772 -0.721870989830677 -1.57704008797893 -0.652220903987854 -0.650160135726931 -1.14525758778588 -1.14335571336968 0.155298234695807 -0.421906095460039 0.00291212390679751 0.424019262301816 0.0151630819208034 0.363021006950553 1.01859032580663 1.08942665729935 1.14265852114108 1.05447243732097 -0.101174018170398 -0.416444271164021 -0.269908971358068 0.535545760274333 0.665402058105039 1.11261424225759 0.628304590618096 0.374451660329561 0.0715775530843955 -1.22377176688993 0.326269224545637 0.428294840947932 0.4124309280082 0.428294840947932 -1.59653187488477 1.12708692435843 0.369088083372645 -0.688815005478162 0.546032754025915 -0.0554273886381425 0.275018075577407 -0.00122348260435113 0.0948943150996072 -0.24716410589084 0.187415411141344 0.392948844543257 0.170223339728563 -0.0878537409693241 0.393004639328426 0.1512882877443 0.37556513017272 0.170411343895981 -0.479331058700249 0.213902166005244 0.547231128976939 0.0219884822491515 1.51050990097115 -0.0839459227332792 -0.760336642484377 -0.132002456371539 0.577385784500657 -0.275859606489372 -0.335771076459948 0.621600725887008 -0.0518137059543482 -0.0791553339614488 0.0246793677034521 1.41086769223967 -0.106288701868255 0.378642333867811 1.41568302478579 0.470518151089766 0.139091062534272 1.01788682634145 -0.433773403679501 1.49449922348782 1.10535849432538 -0.311847242923493 -0.294029299572727 -1.22636137267984 1.89430524712837 -1.36772473848664 1.64973001926938 -1.48053936823849 2.91675681465473 -0.340256492015505 -2.84206554867886 -3.06912606571518 -0.698841085787041 -0.512110494987143 0.118782973662803 -0.253222691802146 -0.433635129646690 0.0933611714375671 2.05085813673242 2.08910182317556 0.851609876026504 3.65740832917335 -1.05104566716749 -0.81198805838969 -0.934713540089751 0.0325801518694305 -0.820554983773384 0.816405792444976 0.996113517894232 -0.0895718564735011 0.177002406126618 0.257229242549338 1.39357130883723 0.528684214628636 1.27668123390779 0.864104269114064 2.36099223716520 2.36569840600121 1.25808701528511 3.55443056263284 1.15265427819715 0.134555916844108 0.447501589277367 0.843801031963044 2.28911399870594 2.37849481868675 1.11379321032682 3.78311640601974 0.658325823829452 0.345689448574848 -0.127913062497672 1.00985722899754 0.266670690544053 1.96507971918537 1.88307351428779 0.885294158177228 3.04070614283817 0.507548907420528 0.782945902365041 1.18916832630005 0.38167708500897 1.98841649454743 1.02198289133093 0.283258722760873 0.687824284162375 2.26997396153269 -0.518132692995077 NA NA NA -0.121307081226652 -1.57671259684859 -0.192086162418072 -0.781619927166195 1.02974443112001 1.60474244140145 -0.855784538887271 1.02974443112001 1.65959114108298 1.54795305354012 0.377544632116113 0.345056299056190 -0.376495204982888 0.186717976326730 -0.0290764091710217 -0.20486074236159 -0.866999290706277 -0.179586917610064 -2.3567600814171 -0.806168419710522 -1.10163455629437 0.711133162131857 1.91555578269716 0.000982230805000054 0.366274085511939 0.349555056842983 -0.667103556466676 -0.997774989562161 -0.550434234817695 -0.700094042593123 -0.723951164973397 -0.758068463174239 -0.883341098110285 -0.496234452746286 -0.206761403847679 0.135886501177382 -0.168101682375999 0.276273458243714 -0.239670623656597 0.995589532085687 NA NA 0.208588319182936 -1.43282269761772 -2.18796872697921 -2.1142225761469 -1.59659252139039 -2.02499943708071 -2.12774674689986 -2.02167600857280 -0.786760324982433 -0.892865025352641 -1.32540560686593 -1.13456075712486 -1.46092628832142 0.0450313646449893 1.96660801112696 -0.916574170259206 -0.504932374582116 -0.517561402912149 -0.96733650839215 -0.905720871613688 -0.0268905756862123 0.0160743563142296 0.448034065596699 0.0506700341513912 1.02603771669660 1.83481102511645 0.309197233213980 -0.0877482160495476 0.433323649193833 -0.453829203087597 -0.720795120821001 -0.729269863516155 0.216547566580331 0.410457490715368 0.0404552219170266 -0.213649633955848 -0.0971344757241498 -0.621382155880758 -0.562984422690424 0.0153599404780417 -0.370032713344162 0.740048203080728 -0.0151887960391858 0.225662736374818 0.247631326570126 NA -1.45147756274603 1.40359011156543 0.510441745738539 -0.761172351331802 0.414990210545308 0.728686686718126 1.04181672452847 -0.233472550782368 1.45569758919300 0.160934720928007 0.944117629837006 1.07647377662931 1.01138552093913 -0.641920701473578 NA -1.60017066522189 -1.77632450544189 -0.487338823302139 0.501945170301363 -1.12080370379032 -0.323947433724531 -0.422459191591281 1.62999564634107 -0.0194637924788484 1.24225827731863 -0.146566714695864
[+] Show/hide bicluster #246 motif PSSM #1. bicluster 246 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 24x4
POSITION A C G T
1 0 0 1 0
2 0 0 0 1
3 0.5 0 0.25 0.25
4 0 0 0 1
5 0 0 1 0
6 0.5 0.25 0 0.25
7 1 0 0 0
8 0.75 0 0.25 0
9 1 0 0 0
10 0.25 0 0 0.75
11 0.75 0 0.25 0
12 0.5 0 0 0.5
13 0.5 0 0.5 0
14 0.25 0 0.75 0
15 0.75 0.25 0 0
16 0 0 0 1
17 0.5 0 0 0.5
18 0 0 0 1
19 1 0 0 0
20 0.75 0.25 0 0
21 0.25 0 0.75 0
22 1 0 0 0
23 0 0 0.75 0.25
24 1 0 0 0 [+] Show/hide bicluster #246 motif PSSM #2. bicluster 246 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 24x4
POSITION A C G T
1 0.571429 0.142857 0 0.285714
2 1 0 0 0
3 0 0.285714 0.571429 0.142857
4 0.285714 0.142857 0.571429 0
5 0 0.714286 0 0.285714
6 0.285714 0 0.142857 0.571429
7 0.428571 0.428571 0 0.142857
8 0 0 0.142857 0.857143
9 0 0.571429 0.428571 0
10 0.571429 0.142857 0 0.285714
11 0.428571 0.142857 0.285714 0.142857
12 1 0 0 0
13 0.142857 0 0.571429 0.285714
14 0 0.285714 0.571429 0.142857
15 1 0 0 0
16 0.428571 0.285714 0 0.285714
17 0.571429 0.285714 0.142857 0
18 0 0.428571 0.285714 0.285714
19 0 0.857143 0.142857 0
20 1 0 0 0
21 0 0.142857 0 0.857143
22 0 0.714286 0.285714 0
23 1 0 0 0
24 0.142857 0 0.857143 0 |